RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 MTIF2P46199 727 aaKnown RBP22.23■■□□□ 1.15
CRLF3-201ENST00000324238 DNA2P51530 1060 aa22.23■■□□□ 1.15
CRLF3-201ENST00000324238 ASIC1P78348 528 aa22.23■■□□□ 1.15
CRLF3-201ENST00000324238 SF3B3Q15393 1217 aaKnown RBP22.23■■□□□ 1.15
CRLF3-201ENST00000324238 SLC39A2Q9NP94 309 aa22.23■■□□□ 1.15
CRLF3-201ENST00000324238 ACTN2P35609 894 aa22.23■■□□□ 1.15
CRLF3-201ENST00000324238 NHEJ1Q9H9Q4 299 aaPredicted RBP22.23■■□□□ 1.15
CRLF3-201ENST00000324238 BCL9LQ86UU0 1499 aa22.22■■□□□ 1.15
CRLF3-201ENST00000324238 ANKRD36CQ5JPF3 1778 aa22.22■■□□□ 1.15
CRLF3-201ENST00000324238 PSMA7O14818 248 aa22.22■■□□□ 1.15
CRLF3-201ENST00000324238 EIF3JO75822 258 aaKnown RBP22.22■■□□□ 1.15
CRLF3-201ENST00000324238 FGRP09769 529 aa22.22■■□□□ 1.15
CRLF3-201ENST00000324238 STRCQ7RTU9 1775 aa22.22■■□□□ 1.15
CRLF3-201ENST00000324238 EPHB6O15197 1021 aa22.22■■□□□ 1.15
CRLF3-201ENST00000324238 CCNT1O60563 726 aaKnown RBP22.22■■□□□ 1.15
CRLF3-201ENST00000324238 TTI2Q6NXR4 508 aa22.22■■□□□ 1.15
CRLF3-201ENST00000324238 HDAC7Q8WUI4 952 aa22.22■■□□□ 1.15
CRLF3-201ENST00000324238 FAM207AQ9NSI2 230 aaPredicted RBP22.22■■□□□ 1.15
CRLF3-201ENST00000324238 LRP5O75197 1615 aa22.21■■□□□ 1.15
CRLF3-201ENST00000324238 ORC4O43929 436 aa22.21■■□□□ 1.15
CRLF3-201ENST00000324238 MLXIPQ9HAP2 919 aa22.21■■□□□ 1.15
CRLF3-201ENST00000324238 LRWD1Q9UFC0 647 aa22.21■■□□□ 1.15
CRLF3-201ENST00000324238 RSPH14Q9UHP6 348 aa22.21■■□□□ 1.15
CRLF3-201ENST00000324238 DOT1LQ8TEK3 1739 aa22.21■■□□□ 1.15
CRLF3-201ENST00000324238 POTEB2H3BUK9 544 aa22.21■■□□□ 1.15
CRLF3-201ENST00000324238 KIF5BP33176 963 aa22.21■■□□□ 1.15
CRLF3-201ENST00000324238 CNOT6LQ96LI5 555 aaKnown RBP22.21■■□□□ 1.15
CRLF3-201ENST00000324238 CAPN11Q9UMQ6 739 aa22.21■■□□□ 1.15
CRLF3-201ENST00000324238 IDEP14735 1019 aa22.2■■□□□ 1.15
CRLF3-201ENST00000324238 TRAPPC10P48553 1259 aa22.2■■□□□ 1.15
CRLF3-201ENST00000324238 USP14P54578 494 aa22.2■■□□□ 1.15
CRLF3-201ENST00000324238 LEKR1Q6ZMV7 388 aa22.2■■□□□ 1.15
CRLF3-201ENST00000324238 DYMQ7RTS9 669 aa22.2■■□□□ 1.15
CRLF3-201ENST00000324238 DNAJC7Q99615 494 aa22.2■■□□□ 1.15
CRLF3-201ENST00000324238 MAD2L2Q9UI95 211 aa22.2■■□□□ 1.15
CRLF3-201ENST00000324238 CACNA1SQ13698 1873 aa22.2■■□□□ 1.15
CRLF3-201ENST00000324238 MYO1CO00159 1063 aa22.2■■□□□ 1.14
CRLF3-201ENST00000324238 ZNF263O14978 683 aa22.2■■□□□ 1.14
CRLF3-201ENST00000324238 RNF40O75150 1001 aa22.2■■□□□ 1.14
CRLF3-201ENST00000324238 SLC7A5Q01650 507 aa22.2■■□□□ 1.14
CRLF3-201ENST00000324238 PPARDQ03181 441 aa22.2■■□□□ 1.14
CRLF3-201ENST00000324238 CCDC155Q8N6L0 562 aa22.2■■□□□ 1.14
CRLF3-201ENST00000324238 NGLY1Q96IV0 654 aa22.2■■□□□ 1.14
CRLF3-201ENST00000324238 NOC4LQ9BVI4 516 aaKnown RBP22.2■■□□□ 1.14
CRLF3-201ENST00000324238 POLD4Q9HCU8 107 aa22.2■■□□□ 1.14
CRLF3-201ENST00000324238 TSPY3P0CV98 308 aa22.2■■□□□ 1.14
CRLF3-201ENST00000324238 TSPY8P0CW00 308 aa22.2■■□□□ 1.14
CRLF3-201ENST00000324238 CALML3P27482 149 aa22.2■■□□□ 1.14
CRLF3-201ENST00000324238 USP17L2Q6R6M4 530 aa22.2■■□□□ 1.14
CRLF3-201ENST00000324238 CABP7Q86V35 215 aa22.2■■□□□ 1.14
CRLF3-201ENST00000324238 GJA10Q969M2 543 aa22.2■■□□□ 1.14
CRLF3-201ENST00000324238 HAUS4Q9H6D7 363 aa22.2■■□□□ 1.14
CRLF3-201ENST00000324238 EXOC1Q9NV70 894 aa22.2■■□□□ 1.14
CRLF3-201ENST00000324238 TRIM14Q14142 442 aa22.19■■□□□ 1.14
CRLF3-201ENST00000324238 GOLGA5Q8TBA6 731 aa22.19■■□□□ 1.14
CRLF3-201ENST00000324238 CCDC96Q2M329 555 aa22.19■■□□□ 1.14
CRLF3-201ENST00000324238 ARL6IP4Q66PJ3 421 aaKnown RBP22.19■■□□□ 1.14
CRLF3-201ENST00000324238 UBA5Q9GZZ9 404 aa22.19■■□□□ 1.14
CRLF3-201ENST00000324238 TMEM260Q9NX78 707 aa22.19■■□□□ 1.14
CRLF3-201ENST00000324238 STIM1Q13586 685 aa22.18■■□□□ 1.14
CRLF3-201ENST00000324238 CLEC4GQ6UXB4 293 aa22.18■■□□□ 1.14
CRLF3-201ENST00000324238 GIMAP8Q8ND71 665 aaPredicted RBP22.18■■□□□ 1.14
CRLF3-201ENST00000324238 BIN2Q9UBW5 565 aaPredicted RBP22.18■■□□□ 1.14
CRLF3-201ENST00000324238 PDS5AQ29RF7 1337 aaKnown RBP22.18■■□□□ 1.14
CRLF3-201ENST00000324238 PSMD14O00487 310 aa22.18■■□□□ 1.14
CRLF3-201ENST00000324238 SYF2O95926 243 aaKnown RBP22.18■■□□□ 1.14
CRLF3-201ENST00000324238 TXKP42681 527 aa22.18■■□□□ 1.14
CRLF3-201ENST00000324238 EIF6P56537 245 aaKnown RBP22.18■■□□□ 1.14
CRLF3-201ENST00000324238 TTC19Q6DKK2 380 aaPredicted RBP22.18■■□□□ 1.14
CRLF3-201ENST00000324238 GLIS3Q8NEA6 775 aa22.18■■□□□ 1.14
CRLF3-201ENST00000324238 COG1Q8WTW3 980 aa22.18■■□□□ 1.14
CRLF3-201ENST00000324238 KANSL2Q9H9L4 492 aa22.18■■□□□ 1.14
CRLF3-201ENST00000324238 SPATA31A5Q5VU36 1347 aa22.17■■□□□ 1.14
CRLF3-201ENST00000324238 SPATA31A7Q8IWB4 1347 aa22.17■■□□□ 1.14
CRLF3-201ENST00000324238 NCK2O43639 380 aa22.17■■□□□ 1.14
CRLF3-201ENST00000324238 LRRC41Q15345 812 aa22.17■■□□□ 1.14
CRLF3-201ENST00000324238 TPTE2Q6XPS3 522 aa22.17■■□□□ 1.14
CRLF3-201ENST00000324238 SMARCC1Q92922 1105 aaPredicted RBP22.17■■□□□ 1.14
CRLF3-201ENST00000324238 KBTBD4Q9NVX7 518 aa22.17■■□□□ 1.14
CRLF3-201ENST00000324238 RRP15Q9Y3B9 282 aaKnown RBP22.17■■□□□ 1.14
CRLF3-201ENST00000324238 CAPN6Q9Y6Q1 641 aa22.17■■□□□ 1.14
CRLF3-201ENST00000324238 MOCS3O95396 460 aa22.17■■□□□ 1.14
CRLF3-201ENST00000324238 LDHBP07195 334 aaKnown RBP22.17■■□□□ 1.14
CRLF3-201ENST00000324238 GGCXP38435 758 aa22.17■■□□□ 1.14
CRLF3-201ENST00000324238 NAPAP54920 295 aa22.17■■□□□ 1.14
CRLF3-201ENST00000324238 MUM1L1Q5H9M0 696 aa22.17■■□□□ 1.14
CRLF3-201ENST00000324238 C2CD5Q86YS7 1000 aa22.17■■□□□ 1.14
CRLF3-201ENST00000324238 ARHGEF1Q92888 912 aaKnown RBP22.17■■□□□ 1.14
CRLF3-201ENST00000324238 ATP8A2Q9NTI2 1148 aa22.17■■□□□ 1.14
CRLF3-201ENST00000324238 ZNHIT6Q9NWK9 470 aaKnown RBP22.17■■□□□ 1.14
CRLF3-201ENST00000324238 MYO1AQ9UBC5 1043 aa22.17■■□□□ 1.14
CRLF3-201ENST00000324238 SRGNP10124 158 aa22.17■■□□□ 1.14
CRLF3-201ENST00000324238 DNM2P50570 870 aa22.17■■□□□ 1.14
CRLF3-201ENST00000324238 ENOX2Q16206 610 aaKnown RBP22.17■■□□□ 1.14
CRLF3-201ENST00000324238 P2RX5Q93086 422 aa22.17■■□□□ 1.14
CRLF3-201ENST00000324238 TMEM47Q9BQJ4 181 aa22.17■■□□□ 1.14
CRLF3-201ENST00000324238 EHD4Q9H223 541 aa22.17■■□□□ 1.14
CRLF3-201ENST00000324238 MMRN2Q9H8L6 949 aa22.17■■□□□ 1.14
CRLF3-201ENST00000324238 ARAP2Q8WZ64 1704 aa22.16■■□□□ 1.14
CRLF3-201ENST00000324238 STXBP3O00186 592 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms