RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 PPIP5K2O43314 1243 aa11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 GMNNO75496 209 aa11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 SRGAP1Q7Z6B7 1085 aa11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 LINC00301Q8NCQ3 95 aa11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 RSAD2Q8WXG1 361 aa11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 COL4A3BPQ9Y5P4 624 aa11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 SCNN1DP51172 638 aa11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 GRM1Q13255 1194 aa11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 ARHGEF25Q86VW2 580 aa11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 DHTKD1Q96HY7 919 aaPredicted RBP11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 FEZ2Q9UHY8 353 aaPredicted RBP11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 PCDHA5Q9Y5H7 936 aa11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 PCK1P35558 622 aa11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 MCF2L2Q86YR7 1114 aa11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 PUS7LQ9H0K6 701 aaKnown RBP11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 NPHP4O75161 1426 aaPredicted RBP11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 TESPA1A2RU30 521 aaPredicted RBP11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 LIG4P49917 911 aa11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 DYNLL1P63167 89 aaKnown RBP11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 MYL7Q01449 175 aa11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 GEN1Q17RS7 908 aa11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 CCDC13Q8IYE1 715 aa11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 ARHGAP24Q8N264 748 aa11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 GABPB2Q8TAK5 448 aaPredicted RBP11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 AK8Q96MA6 479 aa11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 TUBGCP2Q9BSJ2 902 aa11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 EEF1GP26641 437 aaKnown RBP11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 HGSO14964 777 aaPredicted RBP11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 SLC35F6Q8N357 371 aa11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 FTOQ9C0B1 505 aaKnown RBP eCLIP11.98□□□□□ -0.497e-6■□□□□ 10.5
SNRNP200-201ENST00000323853 MED4Q9NPJ6 270 aa11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 RWDD2AQ9UIY3 292 aa11.98□□□□□ -0.49
SNRNP200-201ENST00000323853 PHBP35232 272 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 RASSF7Q02833 373 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 ICA1Q05084 483 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 ASPRV1Q53RT3 343 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 FAM26FQ5R3K3 315 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 PLA2G4DQ86XP0 818 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 CCDC117Q8IWD4 279 aaPredicted RBP11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 LCORLQ8N3X6 602 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 TCP10L2B9ZVM9 353 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 STX2P32856 288 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 ADCY8P40145 1251 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 USPL1Q5W0Q7 1092 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 DPH5Q9H2P9 285 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 RCOR1Q9UKL0 485 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 XDHP47989 1333 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 DOK7Q18PE1 504 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 GNPTABQ3T906 1256 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 XKR9Q5GH70 373 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 SPATS2Q86XZ4 545 aaKnown RBP11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 LARP4BQ92615 738 aaKnown RBP11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 KRT12Q99456 494 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 CARD10Q9BWT7 1032 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 CDC23Q9UJX2 597 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 IRX5P78411 483 aaPredicted RBP11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 PTPROQ16827 1216 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 TSNAXIP1Q2TAA8 658 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 BRDTQ58F21 947 aaPredicted RBP11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 SLFN13Q68D06 897 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 PALM2Q8IXS6 379 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 RABGGTAQ92696 567 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 P2RX5Q93086 422 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 C1orf112Q9NSG2 853 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 RABGAP1Q9Y3P9 1069 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 A0A1B0GUA9 196 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 IL6STP40189 918 aaPredicted RBP11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 IRX3P78415 501 aaPredicted RBP11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 PTPN12Q05209 780 aaKnown RBP11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 KRT26Q7Z3Y9 468 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 FAM178BQ8IXR5 827 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 RUNDC3BQ96NL0 473 aa11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 SOS2Q07890 1332 aaPredicted RBP11.97□□□□□ -0.49
SNRNP200-201ENST00000323853 H0YCG3 227 aa11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 CLNS1AP54105 237 aaKnown RBP11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 KRT81Q14533 505 aa11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 GRAMD1CQ8IYS0 662 aa11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 RAB3IPQ96QF0 476 aaPredicted RBP11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 PPEF1O14829 653 aaPredicted RBP11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 RNF40O75150 1001 aa11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 SEC31AO94979 1220 aaKnown RBP11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 APBA1Q02410 837 aa11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 NCAPD2Q15021 1401 aa11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 CASC4Q6P4E1 433 aa11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 PDE11AQ9HCR9 933 aa11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 ASAP1Q9ULH1 1129 aa11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 ARHGAP31Q2M1Z3 1444 aa11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 HEG1Q9ULI3 1381 aa11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 hCG_1984214I3L0E3 225 aa11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 ZNF713Q8N859 430 aaPredicted RBP11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 KIAA1024Q9UPX6 916 aa11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 BZW2Q9Y6E2 419 aaKnown RBP11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 PRPF3O43395 683 aaKnown RBP11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 DMP1Q13316 513 aaPredicted RBP11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 NECTIN1Q15223 517 aa11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 EXOC3L4Q17RC7 722 aa11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 SMYD4Q8IYR2 804 aaPredicted RBP11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 OSBP2Q969R2 916 aa11.96□□□□□ -0.49
SNRNP200-201ENST00000323853 IVNS1ABPQ9Y6Y0 642 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms