RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 GOPCQ9HD26 462 aa20.96■□□□□ 0.95
USP39-201ENST00000323701 FBXO28Q9NVF7 368 aa20.96■□□□□ 0.95
USP39-201ENST00000323701 POLR2AP24928 1970 aaKnown RBP20.96■□□□□ 0.95
USP39-201ENST00000323701 ACTN4O43707 911 aaKnown RBP20.96■□□□□ 0.95
USP39-201ENST00000323701 NEK8Q86SG6 692 aa20.96■□□□□ 0.95
USP39-201ENST00000323701 CNNM3Q8NE01 707 aa20.96■□□□□ 0.95
USP39-201ENST00000323701 USP25Q9UHP3 1055 aa20.96■□□□□ 0.95
USP39-201ENST00000323701 OPLAHO14841 1288 aa20.95■□□□□ 0.94
USP39-201ENST00000323701 STAT2P52630 851 aa20.95■□□□□ 0.94
USP39-201ENST00000323701 ISM2Q6H9L7 571 aa20.95■□□□□ 0.94
USP39-201ENST00000323701 ZKSCAN4Q969J2 545 aaPredicted RBP20.95■□□□□ 0.94
USP39-201ENST00000323701 RRAGDQ9NQL2 400 aaPredicted RBP20.95■□□□□ 0.94
USP39-201ENST00000323701 PP2D1A8MPX8 630 aa20.95■□□□□ 0.94
USP39-201ENST00000323701 PRR29P0C7W0 189 aa20.95■□□□□ 0.94
USP39-201ENST00000323701 DPCR1Q3MIW9 517 aa20.95■□□□□ 0.94
USP39-201ENST00000323701 CUL5Q93034 780 aa20.95■□□□□ 0.94
USP39-201ENST00000323701 ZNF165P49910 485 aa20.94■□□□□ 0.94
USP39-201ENST00000323701 STX1AQ16623 288 aa20.94■□□□□ 0.94
USP39-201ENST00000323701 C9orf131Q5VYM1 1079 aa20.94■□□□□ 0.94
USP39-201ENST00000323701 ARL6IP4Q66PJ3 421 aaKnown RBP20.94■□□□□ 0.94
USP39-201ENST00000323701 PPP1R9BQ96SB3 815 aa20.94■□□□□ 0.94
USP39-201ENST00000323701 MEIS2O14770 477 aa20.93■□□□□ 0.94
USP39-201ENST00000323701 CTNND1O60716 968 aaKnown RBP20.93■□□□□ 0.94
USP39-201ENST00000323701 TDP2O95551 362 aa20.93■□□□□ 0.94
USP39-201ENST00000323701 SAMD1Q6SPF0 538 aaPredicted RBP20.93■□□□□ 0.94
USP39-201ENST00000323701 DHX58Q96C10 678 aa20.93■□□□□ 0.94
USP39-201ENST00000323701 PDLIM2Q96JY6 352 aa20.93■□□□□ 0.94
USP39-201ENST00000323701 AMNQ9BXJ7 453 aa20.93■□□□□ 0.94
USP39-201ENST00000323701 SSC5DA1L4H1 1573 aa20.93■□□□□ 0.94
USP39-201ENST00000323701 SLC37A4O43826 429 aa20.93■□□□□ 0.94
USP39-201ENST00000323701 FBXO11Q86XK2 927 aa20.93■□□□□ 0.94
USP39-201ENST00000323701 POTEDQ86YR6 584 aa20.93■□□□□ 0.94
USP39-201ENST00000323701 KIFC2Q96AC6 838 aa20.93■□□□□ 0.94
USP39-201ENST00000323701 TUBE1Q9UJT0 475 aa20.93■□□□□ 0.94
USP39-201ENST00000323701 MRPL12P52815 198 aaKnown RBP20.92■□□□□ 0.94
USP39-201ENST00000323701 UVSSAQ2YD98 709 aa20.92■□□□□ 0.94
USP39-201ENST00000323701 APOBEC3FQ8IUX4 373 aaKnown RBP20.92■□□□□ 0.94
USP39-201ENST00000323701 MYH7BA7E2Y1 1941 aa20.92■□□□□ 0.94
USP39-201ENST00000323701 CASP1P29466 404 aa20.92■□□□□ 0.94
USP39-201ENST00000323701 IQCB1Q15051 598 aa20.92■□□□□ 0.94
USP39-201ENST00000323701 FEZ1Q99689 392 aa20.92■□□□□ 0.94
USP39-201ENST00000323701 PCDHA5Q9Y5H7 936 aa20.92■□□□□ 0.94
USP39-201ENST00000323701 NEMFO60524 1076 aa20.91■□□□□ 0.94
USP39-201ENST00000323701 CCDC173Q0VFZ6 552 aa20.91■□□□□ 0.94
USP39-201ENST00000323701 CCDC174Q6PII3 467 aa20.91■□□□□ 0.94
USP39-201ENST00000323701 ZNF112Q9UJU3 913 aa20.91■□□□□ 0.94
USP39-201ENST00000323701 BMP6P22004 513 aa20.9■□□□□ 0.94
USP39-201ENST00000323701 E2F4Q16254 413 aa20.9■□□□□ 0.94
USP39-201ENST00000323701 DTHD1Q6ZMT9 781 aa20.9■□□□□ 0.94
USP39-201ENST00000323701 WRNIP1Q96S55 665 aa20.9■□□□□ 0.94
USP39-201ENST00000323701 TBC1D5Q92609 795 aa20.9■□□□□ 0.94
USP39-201ENST00000323701 STAMQ92783 540 aa20.9■□□□□ 0.94
USP39-201ENST00000323701 GJA10Q969M2 543 aa20.9■□□□□ 0.94
USP39-201ENST00000323701 ANO10Q9NW15 660 aa20.9■□□□□ 0.94
USP39-201ENST00000323701 LONP1P36776 959 aaKnown RBP20.89■□□□□ 0.94
USP39-201ENST00000323701 MTMR2Q13614 643 aa20.89■□□□□ 0.94
USP39-201ENST00000323701 PRKG1Q13976 671 aa20.89■□□□□ 0.94
USP39-201ENST00000323701 POSTNQ15063 836 aa20.89■□□□□ 0.94
USP39-201ENST00000323701 LRRC15Q8TF66 581 aa20.89■□□□□ 0.94
USP39-201ENST00000323701 ANP32BQ92688 251 aaKnown RBP20.89■□□□□ 0.94
USP39-201ENST00000323701 MTMR9Q96QG7 549 aa20.89■□□□□ 0.94
USP39-201ENST00000323701 SH2D4AQ9H788 454 aa20.89■□□□□ 0.94
USP39-201ENST00000323701 OR52Z1P0C646 297 aa20.89■□□□□ 0.93
USP39-201ENST00000323701 HOXA13P31271 388 aaPredicted RBP20.89■□□□□ 0.93
USP39-201ENST00000323701 KARSQ15046 597 aaKnown RBP20.89■□□□□ 0.93
USP39-201ENST00000323701 DHX40Q8IX18 779 aaKnown RBP20.89■□□□□ 0.93
USP39-201ENST00000323701 UIMC1Q96RL1 719 aa20.89■□□□□ 0.93
USP39-201ENST00000323701 MTRQ99707 1265 aa20.89■□□□□ 0.93
USP39-201ENST00000323701 KIAA1683Q9H0B3 1180 aa20.89■□□□□ 0.93
USP39-201ENST00000323701 RANBP17Q9H2T7 1088 aaKnown RBP20.89■□□□□ 0.93
USP39-201ENST00000323701 SLFN14P0C7P3 912 aa20.88■□□□□ 0.93
USP39-201ENST00000323701 PRPHP41219 470 aa20.88■□□□□ 0.93
USP39-201ENST00000323701 AFMP43652 599 aa20.88■□□□□ 0.93
USP39-201ENST00000323701 PLCB2Q00722 1185 aa20.88■□□□□ 0.93
USP39-201ENST00000323701 EMILIN3Q9NT22 766 aa20.88■□□□□ 0.93
USP39-201ENST00000323701 NLRP12P59046 1061 aa20.87■□□□□ 0.93
USP39-201ENST00000323701 SPP2Q13103 211 aa20.87■□□□□ 0.93
USP39-201ENST00000323701 DCAF15Q66K64 600 aa20.87■□□□□ 0.93
USP39-201ENST00000323701 SH3RF1Q7Z6J0 888 aa20.87■□□□□ 0.93
USP39-201ENST00000323701 ELOA2Q8IYF1 753 aaPredicted RBP20.87■□□□□ 0.93
USP39-201ENST00000323701 SCYL3Q8IZE3 742 aa20.87■□□□□ 0.93
USP39-201ENST00000323701 CHURC1Q8WUH1 139 aa20.87■□□□□ 0.93
USP39-201ENST00000323701 PAGE5Q96GU1 130 aa20.87■□□□□ 0.93
USP39-201ENST00000323701 DOCK1Q14185 1865 aa20.87■□□□□ 0.93
USP39-201ENST00000323701 LAD1O00515 517 aa20.87■□□□□ 0.93
USP39-201ENST00000323701 ADCY5O95622 1261 aa20.87■□□□□ 0.93
USP39-201ENST00000323701 PTPRAP18433 802 aa20.87■□□□□ 0.93
USP39-201ENST00000323701 TECP42680 631 aa20.87■□□□□ 0.93
USP39-201ENST00000323701 PDXDC2PQ6P474 469 aa20.87■□□□□ 0.93
USP39-201ENST00000323701 KLRG1Q96E93 195 aa20.87■□□□□ 0.93
USP39-201ENST00000323701 PLIN2Q99541 437 aa20.87■□□□□ 0.93
USP39-201ENST00000323701 ANO3Q9BYT9 981 aa20.87■□□□□ 0.93
USP39-201ENST00000323701 ADARB2Q9NS39 739 aaKnown RBP20.87■□□□□ 0.93
USP39-201ENST00000323701 ADM5C9JUS6 153 aa20.86■□□□□ 0.93
USP39-201ENST00000323701 SARSP49591 514 aaKnown RBP20.86■□□□□ 0.93
USP39-201ENST00000323701 NAALADL2Q58DX5 795 aa20.86■□□□□ 0.93
USP39-201ENST00000323701 CRYGNQ8WXF5 182 aa20.86■□□□□ 0.93
USP39-201ENST00000323701 FEM1BQ9UK73 627 aa20.86■□□□□ 0.93
USP39-201ENST00000323701 PLA2G6O60733 806 aa20.86■□□□□ 0.93
USP39-201ENST00000323701 TXKP42681 527 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms