RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 PPP2R3AQ06190 1150 aa12.25□□□□□ -0.45
TOP3A-201ENST00000321105 TROAPQ12815 778 aa12.25□□□□□ -0.45
TOP3A-201ENST00000321105 POTEDQ86YR6 584 aa12.25□□□□□ -0.45
TOP3A-201ENST00000321105 PAGR1Q9BTK6 254 aa12.25□□□□□ -0.45
TOP3A-201ENST00000321105 ALDH8A1Q9H2A2 487 aaPredicted RBP12.25□□□□□ -0.45
TOP3A-201ENST00000321105 IMPACTQ9P2X3 320 aa12.25□□□□□ -0.45
TOP3A-201ENST00000321105 ARHGAP44Q17R89 818 aa12.25□□□□□ -0.45
TOP3A-201ENST00000321105 HAUS3Q68CZ6 603 aa12.25□□□□□ -0.45
TOP3A-201ENST00000321105 GSDMAQ96QA5 445 aa12.25□□□□□ -0.45
TOP3A-201ENST00000321105 AMNQ9BXJ7 453 aa12.25□□□□□ -0.45
TOP3A-201ENST00000321105 KCNQ5Q9NR82 932 aa12.25□□□□□ -0.45
TOP3A-201ENST00000321105 PDE4DIPQ5VU43 2346 aa12.24□□□□□ -0.45
TOP3A-201ENST00000321105 LONP1P36776 959 aaKnown RBP12.24□□□□□ -0.45
TOP3A-201ENST00000321105 MRPS25P82663 173 aaKnown RBP12.24□□□□□ -0.45
TOP3A-201ENST00000321105 DHX40Q8IX18 779 aaKnown RBP12.24□□□□□ -0.45
TOP3A-201ENST00000321105 VGLL2Q8N8G2 317 aa12.24□□□□□ -0.45
TOP3A-201ENST00000321105 TUBGCP2Q9BSJ2 902 aa12.24□□□□□ -0.45
TOP3A-201ENST00000321105 CLIC2O15247 247 aa12.24□□□□□ -0.45
TOP3A-201ENST00000321105 KRT13P13646 458 aa12.24□□□□□ -0.45
TOP3A-201ENST00000321105 ETF1P62495 437 aaKnown RBP12.24□□□□□ -0.45
TOP3A-201ENST00000321105 FMR1Q06787 632 aaKnown RBP eCLIP12.24□□□□□ -0.45
TOP3A-201ENST00000321105 CDC37Q16543 378 aaPredicted RBP12.24□□□□□ -0.45
TOP3A-201ENST00000321105 PIGOQ8TEQ8 1089 aa12.24□□□□□ -0.45
TOP3A-201ENST00000321105 IFT81Q8WYA0 676 aa12.24□□□□□ -0.45
TOP3A-201ENST00000321105 LARP4BQ92615 738 aaKnown RBP12.24□□□□□ -0.45
TOP3A-201ENST00000321105 FAM107BQ9H098 131 aa12.24□□□□□ -0.45
TOP3A-201ENST00000321105 KCNF1Q9H3M0 494 aa12.24□□□□□ -0.45
TOP3A-201ENST00000321105 PIK3C2AO00443 1686 aa12.24□□□□□ -0.45
TOP3A-201ENST00000321105 FLT1P17948 1338 aa12.24□□□□□ -0.45
TOP3A-201ENST00000321105 RFX7Q2KHR2 1363 aa12.24□□□□□ -0.45
TOP3A-201ENST00000321105 TAL1P17542 331 aaPredicted RBP12.24□□□□□ -0.45
TOP3A-201ENST00000321105 COPB1P53618 953 aaKnown RBP12.24□□□□□ -0.45
TOP3A-201ENST00000321105 KMT5BQ4FZB7 885 aa12.24□□□□□ -0.45
TOP3A-201ENST00000321105 EARS2Q5JPH6 523 aaKnown RBP12.24□□□□□ -0.45
TOP3A-201ENST00000321105 FAM26FQ5R3K3 315 aa12.24□□□□□ -0.45
TOP3A-201ENST00000321105 EEPD1Q7L9B9 569 aa12.24□□□□□ -0.45
TOP3A-201ENST00000321105 CERS3Q8IU89 383 aa12.24□□□□□ -0.45
TOP3A-201ENST00000321105 FLAD1Q8NFF5 587 aa12.24□□□□□ -0.45
TOP3A-201ENST00000321105 RABEP2Q9H5N1 569 aa12.24□□□□□ -0.45
TOP3A-201ENST00000321105 PANK4Q9NVE7 773 aa12.24□□□□□ -0.45
TOP3A-201ENST00000321105 TACC1O75410 805 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 EIF3JO75822 258 aaKnown RBP12.23□□□□□ -0.45
TOP3A-201ENST00000321105 BMP3P12645 472 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 STAT3P40763 770 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 PLA2G4DQ86XP0 818 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 GTPBP4Q9BZE4 634 aaKnown RBP12.23□□□□□ -0.45
TOP3A-201ENST00000321105 IRX2Q9BZI1 471 aaPredicted RBP12.23□□□□□ -0.45
TOP3A-201ENST00000321105 TMEM60Q9H2L4 133 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 TCRBV5S4A2TA0A5A2 114 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 BUB1O43683 1085 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 EXOC3O60645 756 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 LMAN1P49257 510 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 KRT83P78385 493 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 IQCB1Q15051 598 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 MYOCDQ8IZQ8 938 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 TTLL6Q8N841 843 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 OR8K1Q8NGG5 319 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 PPP1R13BQ96KQ4 1090 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 CNOT6LQ96LI5 555 aaKnown RBP12.23□□□□□ -0.45
TOP3A-201ENST00000321105 LRRC4BQ9NT99 713 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 CCPG1Q9ULG6 757 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 NRXN3Q9Y4C0 1643 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 REREQ9P2R6 1566 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 PSDA5PKW4 1024 aaPredicted RBP12.23□□□□□ -0.45
TOP3A-201ENST00000321105 F5H6K3 240 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 RASA1P20936 1047 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 MAGEA1P43355 309 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 KLRC3Q07444 240 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 GPATCH4Q5T3I0 446 aaKnown RBP12.23□□□□□ -0.45
TOP3A-201ENST00000321105 CYP26C1Q6V0L0 522 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 STXBP4Q6ZWJ1 553 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 TIGD1Q96MW7 591 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 EPC1Q9H2F5 836 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 DISC1Q9NRI5 854 aa12.23□□□□□ -0.45
TOP3A-201ENST00000321105 FBXO2Q9UK22 296 aaPredicted RBP12.23□□□□□ -0.45
TOP3A-201ENST00000321105 ASPRV1Q53RT3 343 aa12.22□□□□□ -0.45
TOP3A-201ENST00000321105 ZNF772Q68DY9 489 aaPredicted RBP12.22□□□□□ -0.45
TOP3A-201ENST00000321105 NKX2-3Q8TAU0 364 aa12.22□□□□□ -0.45
TOP3A-201ENST00000321105 CCDC127Q96BQ5 260 aa12.22□□□□□ -0.45
TOP3A-201ENST00000321105 PRCPP42785 496 aa12.22□□□□□ -0.45
TOP3A-201ENST00000321105 MTF1Q14872 753 aa12.22□□□□□ -0.45
TOP3A-201ENST00000321105 EAPPQ56P03 285 aaPredicted RBP12.22□□□□□ -0.45
TOP3A-201ENST00000321105 JAKMIP2Q96AA8 810 aa12.22□□□□□ -0.45
TOP3A-201ENST00000321105 E9PMD0 336 aa12.22□□□□□ -0.45
TOP3A-201ENST00000321105 ZMYND10O75800 440 aa12.22□□□□□ -0.45
TOP3A-201ENST00000321105 FCER1AP12319 257 aa12.22□□□□□ -0.45
TOP3A-201ENST00000321105 POLR2FP61218 127 aaKnown RBP12.22□□□□□ -0.45
TOP3A-201ENST00000321105 PPP4R3AQ6IN85 833 aa12.22□□□□□ -0.45
TOP3A-201ENST00000321105 ILDR1Q86SU0 546 aaPredicted RBP12.22□□□□□ -0.45
TOP3A-201ENST00000321105 COL23A1Q86Y22 540 aaPredicted RBP12.22□□□□□ -0.45
TOP3A-201ENST00000321105 CCDC17Q96LX7 622 aa12.22□□□□□ -0.45
TOP3A-201ENST00000321105 NBPF3Q9H094 633 aa12.22□□□□□ -0.45
TOP3A-201ENST00000321105 TNS2Q63HR2 1409 aa12.22□□□□□ -0.45
TOP3A-201ENST00000321105 ABCB4P21439 1286 aa12.22□□□□□ -0.45
TOP3A-201ENST00000321105 CTTNQ14247 550 aaKnown RBP12.22□□□□□ -0.45
TOP3A-201ENST00000321105 FAM83BQ5T0W9 1011 aa12.22□□□□□ -0.45
TOP3A-201ENST00000321105 RC3H1Q5TC82 1133 aaKnown RBP12.22□□□□□ -0.45
TOP3A-201ENST00000321105 IQCEQ6IPM2 695 aa12.22□□□□□ -0.45
TOP3A-201ENST00000321105 SLC30A10Q6XR72 485 aa12.22□□□□□ -0.45
TOP3A-201ENST00000321105 ADGRF4Q8IZF3 695 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms