RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 PIGSQ96S52 555 aa19.31■□□□□ 0.68
LRRC42-201ENST00000319223 BAZ2BQ9UIF8 2168 aaKnown RBP19.31■□□□□ 0.68
LRRC42-201ENST00000319223 BRCA2P51587 3418 aa19.31■□□□□ 0.68
LRRC42-201ENST00000319223 KLF18A0A0U1RQI7 1052 aa19.31■□□□□ 0.68
LRRC42-201ENST00000319223 PRKAR2AP13861 404 aaKnown RBP19.31■□□□□ 0.68
LRRC42-201ENST00000319223 CNTN2Q02246 1040 aa19.31■□□□□ 0.68
LRRC42-201ENST00000319223 HOMER1Q86YM7 354 aa19.31■□□□□ 0.68
LRRC42-201ENST00000319223 TRMT44Q8IYL2 757 aaKnown RBP19.31■□□□□ 0.68
LRRC42-201ENST00000319223 PIBF1Q8WXW3 757 aa19.31■□□□□ 0.68
LRRC42-201ENST00000319223 AGXT2Q9BYV1 514 aa19.31■□□□□ 0.68
LRRC42-201ENST00000319223 TM6SF1Q9BZW5 370 aa19.31■□□□□ 0.68
LRRC42-201ENST00000319223 RNF208Q9H0X6 261 aa19.31■□□□□ 0.68
LRRC42-201ENST00000319223 CALM1P0DP23 149 aa19.3■□□□□ 0.68
LRRC42-201ENST00000319223 CALM2P0DP24 149 aa19.3■□□□□ 0.68
LRRC42-201ENST00000319223 CALM3P0DP25 149 aa19.3■□□□□ 0.68
LRRC42-201ENST00000319223 KIF5BP33176 963 aa19.3■□□□□ 0.68
LRRC42-201ENST00000319223 FGD1P98174 961 aa19.3■□□□□ 0.68
LRRC42-201ENST00000319223 OLFML2BQ68BL8 750 aa19.3■□□□□ 0.68
LRRC42-201ENST00000319223 NSMFQ6X4W1 530 aa19.3■□□□□ 0.68
LRRC42-201ENST00000319223 ZBTB5O15062 677 aa19.29■□□□□ 0.68
LRRC42-201ENST00000319223 CCND3P30281 292 aaPredicted RBP19.29■□□□□ 0.68
LRRC42-201ENST00000319223 TOB2Q14106 344 aaPredicted RBP19.29■□□□□ 0.68
LRRC42-201ENST00000319223 PRAMEF19Q5SWL8 479 aa19.29■□□□□ 0.68
LRRC42-201ENST00000319223 FBXO11Q86XK2 927 aa19.29■□□□□ 0.68
LRRC42-201ENST00000319223 FBXL16Q8N461 479 aa19.29■□□□□ 0.68
LRRC42-201ENST00000319223 TBC1D5Q92609 795 aa19.29■□□□□ 0.68
LRRC42-201ENST00000319223 LARP6Q9BRS8 491 aaKnown RBP19.29■□□□□ 0.68
LRRC42-201ENST00000319223 FAM217BQ9NTX9 383 aaPredicted RBP19.29■□□□□ 0.68
LRRC42-201ENST00000319223 SLC5A4Q9NY91 659 aa19.29■□□□□ 0.68
LRRC42-201ENST00000319223 CYP39A1Q9NYL5 469 aa19.29■□□□□ 0.68
LRRC42-201ENST00000319223 DIS3Q9Y2L1 958 aaKnown RBP19.29■□□□□ 0.68
LRRC42-201ENST00000319223 CYP46A1Q9Y6A2 500 aa19.29■□□□□ 0.68
LRRC42-201ENST00000319223 PLXNA1Q9UIW2 1896 aa19.29■□□□□ 0.68
LRRC42-201ENST00000319223 ZBTB43O43298 467 aa19.28■□□□□ 0.68
LRRC42-201ENST00000319223 EN2P19622 333 aaPredicted RBP19.28■□□□□ 0.68
LRRC42-201ENST00000319223 BAATQ14032 418 aaPredicted RBP19.28■□□□□ 0.68
LRRC42-201ENST00000319223 SYNE3Q6ZMZ3 975 aa19.28■□□□□ 0.68
LRRC42-201ENST00000319223 CCDC82Q8N4S0 544 aa19.28■□□□□ 0.68
LRRC42-201ENST00000319223 FAM133AQ8N9E0 248 aa19.28■□□□□ 0.68
LRRC42-201ENST00000319223 TRPV1Q8NER1 839 aa19.28■□□□□ 0.68
LRRC42-201ENST00000319223 TMEM106CQ9BVX2 250 aa19.28■□□□□ 0.68
LRRC42-201ENST00000319223 NAP1L2Q9ULW6 460 aaPredicted RBP19.28■□□□□ 0.68
LRRC42-201ENST00000319223 DDX49Q9Y6V7 483 aaKnown RBP19.28■□□□□ 0.68
LRRC42-201ENST00000319223 ASTN1O14525 1302 aa19.28■□□□□ 0.68
LRRC42-201ENST00000319223 SOWAHBA6NEL2 793 aa19.28■□□□□ 0.68
LRRC42-201ENST00000319223 CDC27P30260 824 aa19.28■□□□□ 0.68
LRRC42-201ENST00000319223 ANAPC15P60006 121 aa19.28■□□□□ 0.68
LRRC42-201ENST00000319223 MFSD14CQ5VZR4 134 aa19.28■□□□□ 0.68
LRRC42-201ENST00000319223 TMTC3Q6ZXV5 915 aa19.28■□□□□ 0.68
LRRC42-201ENST00000319223 SPZ1Q9BXG8 430 aa19.28■□□□□ 0.68
LRRC42-201ENST00000319223 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.28■□□□□ 0.68
LRRC42-201ENST00000319223 PAK6Q9NQU5 681 aaPredicted RBP19.28■□□□□ 0.68
LRRC42-201ENST00000319223 RPTORQ8N122 1335 aa19.27■□□□□ 0.68
LRRC42-201ENST00000319223 hCG_1642624A0A1W2PR95 340 aa19.27■□□□□ 0.68
LRRC42-201ENST00000319223 POTEB2H3BUK9 544 aa19.27■□□□□ 0.68
LRRC42-201ENST00000319223 SLC30A10Q6XR72 485 aa19.27■□□□□ 0.68
LRRC42-201ENST00000319223 IL17RAQ96F46 866 aa19.27■□□□□ 0.68
LRRC42-201ENST00000319223 TINF2Q9BSI4 451 aa19.27■□□□□ 0.68
LRRC42-201ENST00000319223 AMNQ9BXJ7 453 aa19.27■□□□□ 0.68
LRRC42-201ENST00000319223 HMX1Q9NP08 348 aaPredicted RBP19.27■□□□□ 0.68
LRRC42-201ENST00000319223 PNMA2Q9UL42 364 aa19.27■□□□□ 0.68
LRRC42-201ENST00000319223 MYH6P13533 1939 aa19.27■□□□□ 0.68
LRRC42-201ENST00000319223 KIAA0100Q14667 2235 aaKnown RBP19.26■□□□□ 0.67
LRRC42-201ENST00000319223 GOLGA8AA7E2F4 631 aa19.26■□□□□ 0.67
LRRC42-201ENST00000319223 GOLGA8BA8MQT2 603 aa19.26■□□□□ 0.67
LRRC42-201ENST00000319223 OPLAHO14841 1288 aa19.26■□□□□ 0.67
LRRC42-201ENST00000319223 SMARCA1P28370 1054 aa19.26■□□□□ 0.67
LRRC42-201ENST00000319223 GNAQP50148 359 aa19.26■□□□□ 0.67
LRRC42-201ENST00000319223 RTN1Q16799 776 aa19.26■□□□□ 0.67
LRRC42-201ENST00000319223 DEFB118Q96PH6 123 aa19.26■□□□□ 0.67
LRRC42-201ENST00000319223 PDRG1Q9NUG6 133 aa19.26■□□□□ 0.67
LRRC42-201ENST00000319223 PFASO15067 1338 aa19.26■□□□□ 0.67
LRRC42-201ENST00000319223 ABCB11O95342 1321 aa19.26■□□□□ 0.67
LRRC42-201ENST00000319223 LCTP09848 1927 aa19.26■□□□□ 0.67
LRRC42-201ENST00000319223 PNMA6FA0A0J9YX94 578 aa19.25■□□□□ 0.67
LRRC42-201ENST00000319223 PTPDC1A2A3K4 754 aa19.25■□□□□ 0.67
LRRC42-201ENST00000319223 EIF5BO60841 1220 aaKnown RBP19.25■□□□□ 0.67
LRRC42-201ENST00000319223 GJB1P08034 283 aa19.25■□□□□ 0.67
LRRC42-201ENST00000319223 CYBAP13498 195 aa19.25■□□□□ 0.67
LRRC42-201ENST00000319223 ADD1P35611 737 aaKnown RBP19.25■□□□□ 0.67
LRRC42-201ENST00000319223 FUT2Q10981 343 aa19.25■□□□□ 0.67
LRRC42-201ENST00000319223 RNF207Q6ZRF8 634 aa19.25■□□□□ 0.67
LRRC42-201ENST00000319223 LZTS2Q9BRK4 669 aa19.25■□□□□ 0.67
LRRC42-201ENST00000319223 PCDHA1Q9Y5I3 950 aa19.25■□□□□ 0.67
LRRC42-201ENST00000319223 SNAI1O95863 264 aaPredicted RBP19.25■□□□□ 0.67
LRRC42-201ENST00000319223 CALML3P27482 149 aa19.25■□□□□ 0.67
LRRC42-201ENST00000319223 EVCP57679 992 aa19.25■□□□□ 0.67
LRRC42-201ENST00000319223 RPS6P62753 249 aaKnown RBP19.25■□□□□ 0.67
LRRC42-201ENST00000319223 MAMDC4Q6UXC1 1216 aa19.25■□□□□ 0.67
LRRC42-201ENST00000319223 SHISA4Q96DD7 197 aa19.25■□□□□ 0.67
LRRC42-201ENST00000319223 PDIA3P30101 505 aaKnown RBP19.24■□□□□ 0.67
LRRC42-201ENST00000319223 GJA8P48165 433 aa19.24■□□□□ 0.67
LRRC42-201ENST00000319223 ZNF467Q7Z7K2 595 aaPredicted RBP19.24■□□□□ 0.67
LRRC42-201ENST00000319223 U2AF1L4Q8WU68 220 aaKnown RBP19.24■□□□□ 0.67
LRRC42-201ENST00000319223 RRP36Q96EU6 259 aaKnown RBP19.24■□□□□ 0.67
LRRC42-201ENST00000319223 RBM28Q9NW13 759 aaKnown RBP19.24■□□□□ 0.67
LRRC42-201ENST00000319223 MRPL11Q9Y3B7 192 aaKnown RBP19.24■□□□□ 0.67
LRRC42-201ENST00000319223 RBBP6Q7Z6E9 1792 aaKnown RBP19.24■□□□□ 0.67
LRRC42-201ENST00000319223 SGPL1O95470 568 aa19.23■□□□□ 0.67
LRRC42-201ENST00000319223 METAP2P50579 478 aaKnown RBP eCLIP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms