RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 RNF207Q6ZRF8 634 aa16.84■□□□□ 0.29
HCFC1-201ENST00000310441 NME8Q8N427 588 aa16.84■□□□□ 0.29
HCFC1-201ENST00000310441 DAAM1Q9Y4D1 1078 aa16.84■□□□□ 0.29
HCFC1-201ENST00000310441 HIBADHP31937 336 aaKnown RBP16.84■□□□□ 0.29
HCFC1-201ENST00000310441 EIF6P56537 245 aaKnown RBP16.84■□□□□ 0.29
HCFC1-201ENST00000310441 TRIM60Q495X7 471 aa16.84■□□□□ 0.29
HCFC1-201ENST00000310441 DHX38Q92620 1227 aaKnown RBP16.84■□□□□ 0.29
HCFC1-201ENST00000310441 NVLO15381 856 aaKnown RBP16.84■□□□□ 0.29
HCFC1-201ENST00000310441 EEF1GP26641 437 aaKnown RBP16.84■□□□□ 0.29
HCFC1-201ENST00000310441 GINS2Q9Y248 185 aa16.84■□□□□ 0.29
HCFC1-201ENST00000310441 PIK3CAP42336 1068 aa16.83■□□□□ 0.29
HCFC1-201ENST00000310441 PDE1BQ01064 536 aa16.83■□□□□ 0.29
HCFC1-201ENST00000310441 ATP5HO75947 161 aa16.83■□□□□ 0.29
HCFC1-201ENST00000310441 ART3Q13508 389 aa16.83■□□□□ 0.29
HCFC1-201ENST00000310441 TRAPPC3LQ5T215 181 aa16.83■□□□□ 0.29
HCFC1-201ENST00000310441 PABPC4Q13310 644 aaKnown RBP eCLIP16.83■□□□□ 0.281e-36■■□□□ 11.4
HCFC1-201ENST00000310441 GPBP1Q86WP2 473 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 ZBTB40Q9NUA8 1239 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 CPP00450 1065 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 PLBD2Q8NHP8 589 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 DSCC1Q9BVC3 393 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 ATP2B4P23634 1241 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 MAP3K10Q02779 954 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 FAM178BQ8IXR5 827 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 JPH2Q9BR39 696 aaPredicted RBP16.83■□□□□ 0.28
HCFC1-201ENST00000310441 A0A1B0GW55 424 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 DUX4L2P0CJ85 424 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 DUX4L3P0CJ86 424 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 DUX4L4P0CJ87 422 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 DUX4L5P0CJ88 424 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 DUX4L6P0CJ89 424 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 DUX4L7P0CJ90 424 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 CASP2P42575 452 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 ARHGEF16Q5VV41 709 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 DUX4Q9UBX2 424 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 UHRF1BP1Q6BDS2 1440 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 ACTN1P12814 892 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 XPAP23025 273 aaPredicted RBP16.83■□□□□ 0.28
HCFC1-201ENST00000310441 TNNI3KQ59H18 835 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 KRT39Q6A163 491 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 METTL13Q8N6R0 699 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 FPGT-TNNI3KV9GXZ4 949 aa16.83■□□□□ 0.28
HCFC1-201ENST00000310441 PYGBP11216 843 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 GFAPP14136 432 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 PTK2Q05397 1052 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 SNX1Q13596 522 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 FGD4Q96M96 766 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 FAM96AQ9H5X1 160 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 UNC13AQ9UPW8 1703 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 BZW1Q7L1Q6 419 aaKnown RBP16.82■□□□□ 0.28
HCFC1-201ENST00000310441 TPH2Q8IWU9 490 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 ZNF212Q9UDV6 495 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 ATP10DQ9P241 1426 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 RASGRF2O14827 1237 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 UFL1O94874 794 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 PEX19P40855 299 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 FAM186BQ8IYM0 893 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 POLKQ9UBT6 870 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 COPG1Q9Y678 874 aaKnown RBP16.82■□□□□ 0.28
HCFC1-201ENST00000310441 SGK1O00141 431 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 EYA2O00167 538 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 MORC4Q8TE76 937 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 SUCLA2Q9P2R7 463 aaPredicted RBP16.82■□□□□ 0.28
HCFC1-201ENST00000310441 MED7O43513 233 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 ALS2CLQ60I27 953 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 BANK1Q8NDB2 785 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 TM6SF1Q9BZW5 370 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 PANK4Q9NVE7 773 aa16.82■□□□□ 0.28
HCFC1-201ENST00000310441 DCTN3O75935 186 aa16.81■□□□□ 0.28
HCFC1-201ENST00000310441 IGBP1P78318 339 aa16.81■□□□□ 0.28
HCFC1-201ENST00000310441 GRM1Q13255 1194 aa16.81■□□□□ 0.28
HCFC1-201ENST00000310441 TCIRG1Q13488 830 aa16.81■□□□□ 0.28
HCFC1-201ENST00000310441 GLG1Q92896 1179 aa16.81■□□□□ 0.28
HCFC1-201ENST00000310441 METTL22Q9BUU2 404 aaPredicted RBP16.81■□□□□ 0.28
HCFC1-201ENST00000310441 TFCP2L1Q9NZI6 479 aa16.81■□□□□ 0.28
HCFC1-201ENST00000310441 SH3TC1Q8TE82 1336 aa16.81■□□□□ 0.28
HCFC1-201ENST00000310441 SERPINB2P05120 415 aa16.81■□□□□ 0.28
HCFC1-201ENST00000310441 ABCB4P21439 1286 aa16.81■□□□□ 0.28
HCFC1-201ENST00000310441 TBC1D7Q9P0N9 293 aa16.81■□□□□ 0.28
HCFC1-201ENST00000310441 SAP30BPQ9UHR5 308 aaKnown RBP16.81■□□□□ 0.28
HCFC1-201ENST00000310441 ARHGAP44Q17R89 818 aa16.81■□□□□ 0.28
HCFC1-201ENST00000310441 LPIN2Q92539 896 aa16.81■□□□□ 0.28
HCFC1-201ENST00000310441 PRAG1Q86YV5 1406 aa16.81■□□□□ 0.28
HCFC1-201ENST00000310441 PDE8AO60658 829 aa16.81■□□□□ 0.28
HCFC1-201ENST00000310441 KBTBD3Q8NAB2 608 aa16.81■□□□□ 0.28
HCFC1-201ENST00000310441 TRIM33Q9UPN9 1127 aa16.81■□□□□ 0.28
HCFC1-201ENST00000310441 PA2G4Q9UQ80 394 aaKnown RBP16.81■□□□□ 0.28
HCFC1-201ENST00000310441 FAM193BQ96PV7 902 aaPredicted RBP16.81■□□□□ 0.28
HCFC1-201ENST00000310441 SLC8A2Q9UPR5 921 aa16.81■□□□□ 0.28
HCFC1-201ENST00000310441 ZNF148Q9UQR1 794 aa16.81■□□□□ 0.28
HCFC1-201ENST00000310441 ATP1A2P50993 1020 aa16.81■□□□□ 0.28
HCFC1-201ENST00000310441 MRFAP1L1Q96HT8 127 aa16.81■□□□□ 0.28
HCFC1-201ENST00000310441 MED23Q9ULK4 1368 aa16.8■□□□□ 0.28
HCFC1-201ENST00000310441 TFDP1Q14186 410 aa16.8■□□□□ 0.28
HCFC1-201ENST00000310441 ZKSCAN8Q15776 578 aaPredicted RBP16.8■□□□□ 0.28
HCFC1-201ENST00000310441 CWF19L2Q2TBE0 894 aaKnown RBP16.8■□□□□ 0.28
HCFC1-201ENST00000310441 GLE1Q53GS7 698 aaKnown RBP16.8■□□□□ 0.28
HCFC1-201ENST00000310441 FAM160B1Q5W0V3 765 aa16.8■□□□□ 0.28
HCFC1-201ENST00000310441 GIMAP4Q9NUV9 329 aa16.8■□□□□ 0.28
HCFC1-201ENST00000310441 PHLPP2Q6ZVD8 1323 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms