RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 CASC4Q6P4E1 433 aa14.41□□□□□ -0.1
SNED1-201ENST00000310397 BANK1Q8NDB2 785 aa14.41□□□□□ -0.1
SNED1-201ENST00000310397 RBM17Q96I25 401 aaKnown RBP14.41□□□□□ -0.1
SNED1-201ENST00000310397 SLFN14P0C7P3 912 aa14.41□□□□□ -0.1
SNED1-201ENST00000310397 RASA3Q14644 834 aa14.41□□□□□ -0.1
SNED1-201ENST00000310397 SLMAPQ14BN4 828 aa14.41□□□□□ -0.1
SNED1-201ENST00000310397 CDCA7Q9BWT1 371 aaPredicted RBP14.41□□□□□ -0.1
SNED1-201ENST00000310397 EPB41L5Q9HCM4 733 aa14.41□□□□□ -0.1
SNED1-201ENST00000310397 ATP10DQ9P241 1426 aa14.41□□□□□ -0.1
SNED1-201ENST00000310397 A1BGP04217 495 aa14.41□□□□□ -0.1
SNED1-201ENST00000310397 MAN1B1Q9UKM7 699 aa14.41□□□□□ -0.1
SNED1-201ENST00000310397 COL4A3BPQ9Y5P4 624 aa14.41□□□□□ -0.1
SNED1-201ENST00000310397 PNMA1Q8ND90 353 aa14.41□□□□□ -0.1
SNED1-201ENST00000310397 HSPA6P17066 643 aa14.41□□□□□ -0.1
SNED1-201ENST00000310397 SOS2Q07890 1332 aaPredicted RBP14.41□□□□□ -0.1
SNED1-201ENST00000310397 PGRMC1O00264 195 aaKnown RBP14.4□□□□□ -0.1
SNED1-201ENST00000310397 HSP90AA5PQ58FG0 334 aa14.4□□□□□ -0.1
SNED1-201ENST00000310397 RABGAP1Q9Y3P9 1069 aa14.4□□□□□ -0.1
SNED1-201ENST00000310397 MAP2P11137 1827 aaKnown RBP14.4□□□□□ -0.1
SNED1-201ENST00000310397 NDUFA10O95299 355 aa14.4□□□□□ -0.1
SNED1-201ENST00000310397 CPSF1Q10570 1443 aaKnown RBP14.4□□□□□ -0.1
SNED1-201ENST00000310397 MBD5Q9P267 1494 aa14.4□□□□□ -0.1
SNED1-201ENST00000310397 OPHN1O60890 802 aa14.4□□□□□ -0.1
SNED1-201ENST00000310397 FKBP3Q00688 224 aaKnown RBP14.4□□□□□ -0.1
SNED1-201ENST00000310397 RESTQ13127 1097 aa14.4□□□□□ -0.1
SNED1-201ENST00000310397 MAN2A1Q16706 1144 aa14.4□□□□□ -0.1
SNED1-201ENST00000310397 HAUS2Q9NVX0 235 aa14.4□□□□□ -0.1
SNED1-201ENST00000310397 THEGQ9P2T0 379 aa14.4□□□□□ -0.1
SNED1-201ENST00000310397 USP17L12C9JPN9 530 aa14.4□□□□□ -0.1
SNED1-201ENST00000310397 USP17L21D6R901 530 aa14.4□□□□□ -0.1
SNED1-201ENST00000310397 ENC1O14682 589 aa14.4□□□□□ -0.1
SNED1-201ENST00000310397 DAPK3O43293 454 aa14.4□□□□□ -0.1
SNED1-201ENST00000310397 ATF2P15336 505 aa14.4□□□□□ -0.1
SNED1-201ENST00000310397 CUL1Q13616 776 aa14.4□□□□□ -0.1
SNED1-201ENST00000310397 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.4□□□□□ -0.1
SNED1-201ENST00000310397 PLEKHA4Q9H4M7 779 aa14.4□□□□□ -0.1
SNED1-201ENST00000310397 DBNLQ9UJU6 430 aaKnown RBP14.4□□□□□ -0.1
SNED1-201ENST00000310397 ADAM21Q9UKJ8 722 aa14.4□□□□□ -0.1
SNED1-201ENST00000310397 EIF3CLB5ME19 914 aaKnown RBP14.4□□□□□ -0.1
SNED1-201ENST00000310397 GAS7O60861 476 aa14.4□□□□□ -0.1
SNED1-201ENST00000310397 HEXIM1O94992 359 aaKnown RBP14.4□□□□□ -0.1
SNED1-201ENST00000310397 EIF3CQ99613 913 aaKnown RBP14.4□□□□□ -0.1
SNED1-201ENST00000310397 ADAM9Q13443 819 aa14.4□□□□□ -0.1
SNED1-201ENST00000310397 CNBD1Q8NA66 436 aa14.4□□□□□ -0.1
SNED1-201ENST00000310397 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.4□□□□□ -0.1
SNED1-201ENST00000310397 DAAM1Q9Y4D1 1078 aa14.4□□□□□ -0.1
SNED1-201ENST00000310397 ZBED6P86452 979 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 FAM26FQ5R3K3 315 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 GGA1Q9UJY5 639 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 SRPRBQ9Y5M8 271 aaKnown RBP14.39□□□□□ -0.11
SNED1-201ENST00000310397 PDE6CP51160 858 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 PLA2G4DQ86XP0 818 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 FAM178BQ8IXR5 827 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 CABLES1Q8TDN4 633 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 DDX25Q9UHL0 483 aaKnown RBP14.39□□□□□ -0.11
SNED1-201ENST00000310397 CTNND1O60716 968 aaKnown RBP14.39□□□□□ -0.11
SNED1-201ENST00000310397 KCNA6P17658 529 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 GLE1Q53GS7 698 aaKnown RBP14.39□□□□□ -0.11
SNED1-201ENST00000310397 OTUD6AQ7L8S5 288 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 DPH5Q9H2P9 285 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 TXLNGQ9NUQ3 528 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 IFNB1P01574 187 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 NR1D1P20393 614 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 PPARDQ03181 441 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 NECTIN1Q15223 517 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 ARHGEF18Q6ZSZ5 1173 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 TRIM4Q9C037 500 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 SOWAHDA6NJG2 315 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 MMP1P03956 469 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 P4HA1P13674 534 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 CCDC125Q86Z20 511 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 SLC39A2Q9NP94 309 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 RAB20Q9NX57 234 aa14.39□□□□□ -0.11
SNED1-201ENST00000310397 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.39□□□□□ -0.11
SNED1-201ENST00000310397 P2RX5Q93086 422 aa14.38□□□□□ -0.11
SNED1-201ENST00000310397 UFL1O94874 794 aa14.38□□□□□ -0.11
SNED1-201ENST00000310397 CNGA1P29973 690 aa14.38□□□□□ -0.11
SNED1-201ENST00000310397 HNRNPH2P55795 449 aaKnown RBP14.38□□□□□ -0.11
SNED1-201ENST00000310397 KIF23Q02241 960 aaPredicted RBP14.38□□□□□ -0.11
SNED1-201ENST00000310397 SIRT2Q8IXJ6 389 aa14.38□□□□□ -0.11
SNED1-201ENST00000310397 MAGOHBQ96A72 148 aaKnown RBP14.38□□□□□ -0.11
SNED1-201ENST00000310397 KLRF2D3W0D1 207 aa14.38□□□□□ -0.11
SNED1-201ENST00000310397 FMO2Q99518 471 aa14.38□□□□□ -0.11
SNED1-201ENST00000310397 TUBB6Q9BUF5 446 aa14.38□□□□□ -0.11
SNED1-201ENST00000310397 PSTPIP2Q9H939 334 aa14.38□□□□□ -0.11
SNED1-201ENST00000310397 ARHGAP42A6NI28 874 aa14.38□□□□□ -0.11
SNED1-201ENST00000310397 NBPF9Q3BBW0 867 aa14.38□□□□□ -0.11
SNED1-201ENST00000310397 TPH2Q8IWU9 490 aa14.38□□□□□ -0.11
SNED1-201ENST00000310397 CMTR1Q8N1G2 835 aaKnown RBP14.38□□□□□ -0.11
SNED1-201ENST00000310397 BIN2Q9UBW5 565 aaPredicted RBP14.38□□□□□ -0.11
SNED1-201ENST00000310397 MORC2Q9Y6X9 1032 aaPredicted RBP14.38□□□□□ -0.11
SNED1-201ENST00000310397 GOLGA8QA0A0J9YX86 632 aa14.38□□□□□ -0.11
SNED1-201ENST00000310397 GOLGA8OA6NCC3 632 aa14.38□□□□□ -0.11
SNED1-201ENST00000310397 GOLGA8NF8WBI6 632 aa14.38□□□□□ -0.11
SNED1-201ENST00000310397 EIF6P56537 245 aaKnown RBP14.38□□□□□ -0.11
SNED1-201ENST00000310397 SF3A3Q12874 501 aaKnown RBP eCLIP14.38□□□□□ -0.11
SNED1-201ENST00000310397 MIS12Q9H081 205 aa14.38□□□□□ -0.11
SNED1-201ENST00000310397 HARSP12081 509 aaKnown RBP14.38□□□□□ -0.11
SNED1-201ENST00000310397 RASIP1Q5U651 963 aa14.38□□□□□ -0.11
SNED1-201ENST00000310397 CTAGE3PQ8IX95 158 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms