RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 RFX7Q2KHR2 1363 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 PLA2R1Q13018 1463 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 MYCLP12524 364 aaPredicted RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 BMP3P12645 472 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 HSPA6P17066 643 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 XPAP23025 273 aaPredicted RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 TNFAIP2Q03169 654 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 CWF19L2Q2TBE0 894 aaKnown RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 MSL1Q68DK7 614 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 NSMFQ6X4W1 530 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 TRIM50Q86XT4 487 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 ZNF496Q96IT1 587 aaPredicted RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 C2orf40Q9H1Z8 148 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 RNF14Q9UBS8 474 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 SEL1LQ9UBV2 794 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 DAAM1Q9Y4D1 1078 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 ZBTB7BO15156 539 aaPredicted RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 GAS2O43903 313 aaKnown RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 NOL3O60936 208 aaKnown RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 AMPD2Q01433 879 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 GABPAQ06546 454 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 NMIQ13287 307 aaPredicted RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 TTLL4Q14679 1199 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 NCAPG2Q86XI2 1143 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 HELBQ8NG08 1087 aaPredicted RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 TSPYL2Q9H2G4 693 aaPredicted RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 OLFML3Q9NRN5 406 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 SMCO2A6NFE2 343 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 KIAA0391O15091 583 aaKnown RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 RPS6KA4O75676 772 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 STAM2O75886 525 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 ARMCX5Q6P1M9 558 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 SECISBP2LQ93073 1101 aaKnown RBP3.5□□□□□ -1.85
CLOCK-201ENST00000309964 GPCPD1Q9NPB8 672 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 TACC3Q9Y6A5 838 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 CPS1P31327 1500 aa3.5□□□□□ -1.85
CLOCK-201ENST00000309964 ESYT2A0FGR8 921 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 SYT1P21579 422 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 FKBP3Q00688 224 aaKnown RBP3.49□□□□□ -1.85
CLOCK-201ENST00000309964 B4GALNT4Q76KP1 1039 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 SSH3Q8TE77 659 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 DHX58Q96C10 678 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 MYO3AQ8NEV4 1616 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 TNS3Q68CZ2 1445 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 PALLDQ8WX93 1383 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 C19orf81C9J6K1 198 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 RRP9O43818 475 aaKnown RBP3.49□□□□□ -1.85
CLOCK-201ENST00000309964 ALDH1A1P00352 501 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 PSMC4P43686 418 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 PDE6CP51160 858 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 AP3M2P53677 418 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 ANO1Q5XXA6 986 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 DGKHQ86XP1 1220 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 IFNL3Q8IZI9 196 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 BLIDQ8IZY5 108 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 URGCPQ8TCY9 931 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 HVCN1Q96D96 273 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 SH3GLB2Q9NR46 395 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.49□□□□□ -1.85
CLOCK-201ENST00000309964 TBC1D7Q9P0N9 293 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 BCCIPQ9P287 314 aaKnown RBP eCLIP3.49□□□□□ -1.85
CLOCK-201ENST00000309964 NARFQ9UHQ1 456 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 GINS2Q9Y248 185 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 KIF1AQ12756 1690 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 ABCC4O15439 1325 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 FLT1P17948 1338 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 WDR19Q8NEZ3 1342 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 WDR64B1ANS9 1081 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 FOXP2O15409 715 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 ADCY5O95622 1261 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 ZNF853P0CG23 659 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 TIMM10P62072 90 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 LACTBP83111 547 aaPredicted RBP3.49□□□□□ -1.85
CLOCK-201ENST00000309964 PPARAQ07869 468 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 DNAJC10Q8IXB1 793 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 MYOCDQ8IZQ8 938 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 SAMD3Q8N6K7 520 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 SPZ1Q9BXG8 430 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 PPP1R12CQ9BZL4 782 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 VCX3BQ9H321 246 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 FAN1Q9Y2M0 1017 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 KDM6AO15550 1401 aaPredicted RBP3.49□□□□□ -1.85
CLOCK-201ENST00000309964 ANKRD12Q6UB98 2062 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 USP17L12C9JPN9 530 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 USP17L21D6R901 530 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 PRR29P0C7W0 189 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 CRKLP46109 303 aaKnown RBP3.49□□□□□ -1.85
CLOCK-201ENST00000309964 LAMB3Q13751 1172 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 CCDC122Q5T0U0 273 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 TMEM106CQ9BVX2 250 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 ZNF341Q9BYN7 854 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 DDX25Q9UHL0 483 aaKnown RBP3.49□□□□□ -1.85
CLOCK-201ENST00000309964 UBN2Q6ZU65 1347 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 IGSF1Q8N6C5 1336 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 A6NJR5 290 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 HSPD1P10809 573 aaKnown RBP3.49□□□□□ -1.85
CLOCK-201ENST00000309964 PPP2R5DQ14738 602 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 LRCH2Q5VUJ6 765 aa3.49□□□□□ -1.85
CLOCK-201ENST00000309964 SEPT12Q8IYM1 358 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms