RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 CERKQ8TCT0 537 aa12.97□□□□□ -0.33
PTPN2-201ENST00000309660 PANX2Q96RD6 677 aa12.97□□□□□ -0.33
PTPN2-201ENST00000309660 PUF60Q9UHX1 559 aaKnown RBP12.97□□□□□ -0.33
PTPN2-201ENST00000309660 ADGRG1Q9Y653 693 aa12.97□□□□□ -0.33
PTPN2-201ENST00000309660 POTEMA6NI47 508 aa12.97□□□□□ -0.33
PTPN2-201ENST00000309660 CCDC93Q567U6 631 aa12.97□□□□□ -0.33
PTPN2-201ENST00000309660 CALML4Q96GE6 196 aa12.97□□□□□ -0.33
PTPN2-201ENST00000309660 SLC39A2Q9NP94 309 aa12.97□□□□□ -0.33
PTPN2-201ENST00000309660 KCNQ5Q9NR82 932 aa12.97□□□□□ -0.33
PTPN2-201ENST00000309660 MTMR4Q9NYA4 1195 aa12.97□□□□□ -0.33
PTPN2-201ENST00000309660 SERPINB13Q9UIV8 391 aa12.97□□□□□ -0.33
PTPN2-201ENST00000309660 CALCRLQ16602 461 aa12.96□□□□□ -0.33
PTPN2-201ENST00000309660 KIF4BQ2VIQ3 1234 aa12.96□□□□□ -0.33
PTPN2-201ENST00000309660 ADSSL1Q8N142 457 aa12.96□□□□□ -0.33
PTPN2-201ENST00000309660 LRWD1Q9UFC0 647 aa12.96□□□□□ -0.33
PTPN2-201ENST00000309660 B4DLN1 442 aa12.96□□□□□ -0.33
PTPN2-201ENST00000309660 TUBB4AP04350 444 aa12.96□□□□□ -0.33
PTPN2-201ENST00000309660 ADCY7P51828 1080 aa12.96□□□□□ -0.33
PTPN2-201ENST00000309660 PPP2R3AQ06190 1150 aa12.96□□□□□ -0.33
PTPN2-201ENST00000309660 NFIAQ12857 509 aa12.96□□□□□ -0.33
PTPN2-201ENST00000309660 STK4Q13043 487 aa12.96□□□□□ -0.33
PTPN2-201ENST00000309660 TSR1Q2NL82 804 aaKnown RBP12.96□□□□□ -0.33
PTPN2-201ENST00000309660 CT47A1Q5JQC4 288 aaPredicted RBP12.96□□□□□ -0.33
PTPN2-201ENST00000309660 FEZ1Q99689 392 aa12.96□□□□□ -0.33
PTPN2-201ENST00000309660 PCDHAC2Q9Y5I4 1007 aa12.96□□□□□ -0.33
PTPN2-201ENST00000309660 MORC2Q9Y6X9 1032 aaPredicted RBP12.96□□□□□ -0.33
PTPN2-201ENST00000309660 KIAA1551Q9HCM1 1747 aa12.96□□□□□ -0.34
PTPN2-201ENST00000309660 ABL1P00519 1130 aa12.96□□□□□ -0.34
PTPN2-201ENST00000309660 MTIF2P46199 727 aaKnown RBP12.96□□□□□ -0.34
PTPN2-201ENST00000309660 CERS3Q8IU89 383 aa12.96□□□□□ -0.34
PTPN2-201ENST00000309660 DAGLBQ8NCG7 672 aa12.96□□□□□ -0.34
PTPN2-201ENST00000309660 ABHD10Q9NUJ1 306 aa12.96□□□□□ -0.34
PTPN2-201ENST00000309660 OGFRQ9NZT2 677 aa12.96□□□□□ -0.34
PTPN2-201ENST00000309660 LIMA1Q9UHB6 759 aaKnown RBP12.96□□□□□ -0.34
PTPN2-201ENST00000309660 H7C1D1 291 aa12.95□□□□□ -0.34
PTPN2-201ENST00000309660 TFRCP02786 760 aaKnown RBP12.95□□□□□ -0.34
PTPN2-201ENST00000309660 C15orf52Q6ZUT6 534 aaKnown RBP12.95□□□□□ -0.34
PTPN2-201ENST00000309660 CHP1Q99653 195 aa12.95□□□□□ -0.34
PTPN2-201ENST00000309660 CCSER1Q9C0I3 900 aa12.95□□□□□ -0.34
PTPN2-201ENST00000309660 SLC37A4O43826 429 aa12.95□□□□□ -0.34
PTPN2-201ENST00000309660 TRIM21P19474 475 aaKnown RBP12.95□□□□□ -0.34
PTPN2-201ENST00000309660 PBX1P40424 430 aa12.95□□□□□ -0.34
PTPN2-201ENST00000309660 CLCN6P51797 869 aa12.95□□□□□ -0.34
PTPN2-201ENST00000309660 IKQ13123 557 aaPredicted RBP12.95□□□□□ -0.34
PTPN2-201ENST00000309660 SHROOM1Q2M3G4 852 aaPredicted RBP12.95□□□□□ -0.34
PTPN2-201ENST00000309660 KRT27Q7Z3Y8 459 aa12.95□□□□□ -0.34
PTPN2-201ENST00000309660 TRIM9Q9C026 710 aa12.95□□□□□ -0.34
PTPN2-201ENST00000309660 DDX41Q9UJV9 622 aaKnown RBP12.95□□□□□ -0.34
PTPN2-201ENST00000309660 TFR2Q9UP52 801 aa12.95□□□□□ -0.34
PTPN2-201ENST00000309660 ERVK-24P63145 666 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 MCM6Q14566 821 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 SAMD1Q6SPF0 538 aaPredicted RBP12.94□□□□□ -0.34
PTPN2-201ENST00000309660 CRAMP1Q96RY5 1269 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 KBTBD4Q9NVX7 518 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 GUCA1BQ9UMX6 200 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 TTC26A0AVF1 554 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 SEC31AO94979 1220 aaKnown RBP12.94□□□□□ -0.34
PTPN2-201ENST00000309660 IRF2BP1Q8IU81 584 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 ZFPM1Q8IX07 1006 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 TRIM34Q9BYJ4 488 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 COA1Q9GZY4 146 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 GAKO14976 1311 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 LAMB1P07942 1786 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 USP17L10C9JJH3 530 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 LAD1O00515 517 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 KLRC4O43908 158 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 TTLL1O95922 423 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 HLA-DOAP06340 250 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 KLK7P49862 253 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 SNAP25P60880 206 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 TMEM266Q2M3C6 531 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 SP8Q8IXZ3 490 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 ADGRF4Q8IZF3 695 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 SNX29Q8TEQ0 813 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 ST7Q9NRC1 585 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 ARGLU1Q9NWB6 273 aaPredicted RBP12.94□□□□□ -0.34
PTPN2-201ENST00000309660 PODXL2Q9NZ53 605 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 LUC7L2Q9Y383 392 aaKnown RBP12.94□□□□□ -0.34
PTPN2-201ENST00000309660 ATP6V0A2Q9Y487 856 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 COL24A1Q17RW2 1714 aa12.94□□□□□ -0.34
PTPN2-201ENST00000309660 MMP10P09238 476 aa12.93□□□□□ -0.34
PTPN2-201ENST00000309660 RAD51AP2Q09MP3 1159 aa12.93□□□□□ -0.34
PTPN2-201ENST00000309660 TBC1D8BQ0IIM8 1120 aa12.93□□□□□ -0.34
PTPN2-201ENST00000309660 TMCO3Q6UWJ1 677 aa12.93□□□□□ -0.34
PTPN2-201ENST00000309660 TEKT1Q969V4 418 aa12.93□□□□□ -0.34
PTPN2-201ENST00000309660 TUBGCP2Q9BSJ2 902 aa12.93□□□□□ -0.34
PTPN2-201ENST00000309660 NAA15Q9BXJ9 866 aaKnown RBP12.93□□□□□ -0.34
PTPN2-201ENST00000309660 ZHX1Q9UKY1 873 aaPredicted RBP12.93□□□□□ -0.34
PTPN2-201ENST00000309660 TADA3O75528 432 aa12.93□□□□□ -0.34
PTPN2-201ENST00000309660 HOXA10P31260 410 aaPredicted RBP12.93□□□□□ -0.34
PTPN2-201ENST00000309660 ANKRD40Q6AI12 368 aa12.93□□□□□ -0.34
PTPN2-201ENST00000309660 CDC42EP5Q6NZY7 148 aa12.93□□□□□ -0.34
PTPN2-201ENST00000309660 SV2BQ7L1I2 683 aa12.93□□□□□ -0.34
PTPN2-201ENST00000309660 TMTC1Q8IUR5 882 aa12.93□□□□□ -0.34
PTPN2-201ENST00000309660 SLC35F6Q8N357 371 aa12.93□□□□□ -0.34
PTPN2-201ENST00000309660 FAM163AQ96GL9 167 aaPredicted RBP12.93□□□□□ -0.34
PTPN2-201ENST00000309660 ZHX3Q9H4I2 956 aa12.93□□□□□ -0.34
PTPN2-201ENST00000309660 TRIM10Q9UDY6 481 aa12.93□□□□□ -0.34
PTPN2-201ENST00000309660 RHOBTB3O94955 611 aa12.93□□□□□ -0.34
PTPN2-201ENST00000309660 AMPD3Q01432 767 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms