RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 C2orf54Q08AI8 447 aa14.1□□□□□ -0.15
RETREG3-201ENST00000309428 PLS1Q14651 629 aa14.1□□□□□ -0.15
RETREG3-201ENST00000309428 CFAP58Q5T655 872 aa14.1□□□□□ -0.15
RETREG3-201ENST00000309428 ICE2Q659A1 982 aa14.1□□□□□ -0.15
RETREG3-201ENST00000309428 TYW1BQ6NUM6 668 aa14.1□□□□□ -0.15
RETREG3-201ENST00000309428 REXO1L1PQ8IX06 675 aa14.1□□□□□ -0.15
RETREG3-201ENST00000309428 SHISA4Q96DD7 197 aa14.1□□□□□ -0.15
RETREG3-201ENST00000309428 EPN1Q9Y6I3 576 aaPredicted RBP14.1□□□□□ -0.15
RETREG3-201ENST00000309428 PARP1P09874 1014 aaKnown RBP14.1□□□□□ -0.15
RETREG3-201ENST00000309428 UBXN2AP68543 259 aa14.1□□□□□ -0.15
RETREG3-201ENST00000309428 PAK1Q13153 545 aa14.1□□□□□ -0.15
RETREG3-201ENST00000309428 TRIM31Q9BZY9 425 aa14.1□□□□□ -0.15
RETREG3-201ENST00000309428 INTS13Q9NVM9 706 aa14.1□□□□□ -0.15
RETREG3-201ENST00000309428 LMO7Q8WWI1 1683 aa14.1□□□□□ -0.15
RETREG3-201ENST00000309428 POTEMA6NI47 508 aa14.1□□□□□ -0.15
RETREG3-201ENST00000309428 TACC1O75410 805 aa14.1□□□□□ -0.15
RETREG3-201ENST00000309428 KLK7P49862 253 aa14.1□□□□□ -0.15
RETREG3-201ENST00000309428 DPYDQ12882 1025 aa14.1□□□□□ -0.15
RETREG3-201ENST00000309428 ZNF804AQ7Z570 1209 aa14.1□□□□□ -0.15
RETREG3-201ENST00000309428 FNBP4Q8N3X1 1017 aaPredicted RBP14.1□□□□□ -0.15
RETREG3-201ENST00000309428 CSGALNACT2Q8N6G5 542 aa14.1□□□□□ -0.15
RETREG3-201ENST00000309428 PNKPQ96T60 521 aa14.1□□□□□ -0.15
RETREG3-201ENST00000309428 NLRC4Q9NPP4 1024 aa14.1□□□□□ -0.15
RETREG3-201ENST00000309428 USP17L5A8MUK1 530 aa14.09□□□□□ -0.15
RETREG3-201ENST00000309428 FXR1P51114 621 aaKnown RBP eCLIP14.09□□□□□ -0.15
RETREG3-201ENST00000309428 MORC3Q14149 939 aa14.09□□□□□ -0.15
RETREG3-201ENST00000309428 FCHSD1Q86WN1 690 aa14.09□□□□□ -0.15
RETREG3-201ENST00000309428 KLHL7Q8IXQ5 586 aa14.09□□□□□ -0.15
RETREG3-201ENST00000309428 ZC3H12CQ9C0D7 883 aaKnown RBP14.09□□□□□ -0.15
RETREG3-201ENST00000309428 EXOC1Q9NV70 894 aa14.09□□□□□ -0.15
RETREG3-201ENST00000309428 MARF1Q9Y4F3 1742 aaKnown RBP14.09□□□□□ -0.15
RETREG3-201ENST00000309428 PSMA7O14818 248 aa14.09□□□□□ -0.15
RETREG3-201ENST00000309428 BUB1O43683 1085 aa14.09□□□□□ -0.15
RETREG3-201ENST00000309428 TOM1O60784 492 aa14.09□□□□□ -0.15
RETREG3-201ENST00000309428 ECM2O94769 699 aaPredicted RBP14.09□□□□□ -0.15
RETREG3-201ENST00000309428 RAD9BQ6WBX8 426 aa14.09□□□□□ -0.15
RETREG3-201ENST00000309428 ALS2CR12Q96Q35 445 aa14.09□□□□□ -0.15
RETREG3-201ENST00000309428 TMEM47Q9BQJ4 181 aa14.09□□□□□ -0.15
RETREG3-201ENST00000309428 NYXQ9GZU5 481 aa14.09□□□□□ -0.15
RETREG3-201ENST00000309428 KCNJ18B7U540 433 aa14.09□□□□□ -0.15
RETREG3-201ENST00000309428 FCER1AP12319 257 aa14.09□□□□□ -0.15
RETREG3-201ENST00000309428 MAP2K2P36507 400 aa14.09□□□□□ -0.15
RETREG3-201ENST00000309428 KCNJ12Q14500 433 aa14.09□□□□□ -0.15
RETREG3-201ENST00000309428 TCERG1LQ5VWI1 586 aa14.09□□□□□ -0.15
RETREG3-201ENST00000309428 MAEAQ7L5Y9 396 aa14.09□□□□□ -0.15
RETREG3-201ENST00000309428 FAM71BQ8TC56 605 aa14.09□□□□□ -0.15
RETREG3-201ENST00000309428 CHP1Q99653 195 aa14.09□□□□□ -0.15
RETREG3-201ENST00000309428 FUT8Q9BYC5 575 aa14.09□□□□□ -0.15
RETREG3-201ENST00000309428 PRCPP42785 496 aa14.08□□□□□ -0.15
RETREG3-201ENST00000309428 SPAG1Q07617 926 aa14.08□□□□□ -0.15
RETREG3-201ENST00000309428 JPH2Q9BR39 696 aaPredicted RBP14.08□□□□□ -0.15
RETREG3-201ENST00000309428 MKRN1Q9UHC7 482 aaKnown RBP14.08□□□□□ -0.15
RETREG3-201ENST00000309428 GGA1Q9UJY5 639 aa14.08□□□□□ -0.15
RETREG3-201ENST00000309428 ADGRG1Q9Y653 693 aa14.08□□□□□ -0.15
RETREG3-201ENST00000309428 TNS2Q63HR2 1409 aa14.08□□□□□ -0.16
RETREG3-201ENST00000309428 RPN1P04843 607 aaKnown RBP14.08□□□□□ -0.16
RETREG3-201ENST00000309428 KRT83P78385 493 aa14.08□□□□□ -0.16
RETREG3-201ENST00000309428 GPSM2P81274 684 aa14.08□□□□□ -0.16
RETREG3-201ENST00000309428 TTBK2Q6IQ55 1244 aa14.08□□□□□ -0.16
RETREG3-201ENST00000309428 CEP95Q96GE4 821 aa14.08□□□□□ -0.16
RETREG3-201ENST00000309428 BCS1LQ9Y276 419 aa14.08□□□□□ -0.16
RETREG3-201ENST00000309428 CHMP2AO43633 222 aa14.08□□□□□ -0.16
RETREG3-201ENST00000309428 ACTN4O43707 911 aaKnown RBP14.08□□□□□ -0.16
RETREG3-201ENST00000309428 GBP2P32456 591 aaPredicted RBP14.08□□□□□ -0.16
RETREG3-201ENST00000309428 NF2P35240 595 aa14.08□□□□□ -0.16
RETREG3-201ENST00000309428 VAV2P52735 878 aa14.08□□□□□ -0.16
RETREG3-201ENST00000309428 KRT31Q15323 416 aa14.08□□□□□ -0.16
RETREG3-201ENST00000309428 SEC23AQ15436 765 aa14.08□□□□□ -0.16
RETREG3-201ENST00000309428 SHROOM1Q2M3G4 852 aaPredicted RBP14.08□□□□□ -0.16
RETREG3-201ENST00000309428 FBXW10Q5XX13 1052 aa14.08□□□□□ -0.16
RETREG3-201ENST00000309428 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.08□□□□□ -0.16
RETREG3-201ENST00000309428 GDF11O95390 407 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 CALM1P0DP23 149 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 CALM2P0DP24 149 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 CALM3P0DP25 149 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 MAP3K9P80192 1104 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 PDCLQ13371 301 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 CCDC40Q4G0X9 1142 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 C8orf74Q6P047 294 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 TC2NQ8N9U0 490 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 CAPS2Q9BXY5 557 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 ANKRD2Q9GZV1 360 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 RBM28Q9NW13 759 aaKnown RBP14.07□□□□□ -0.16
RETREG3-201ENST00000309428 HPSEQ9Y251 543 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 SPATA1Q5VX52 437 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 CCDC91Q7Z6B0 441 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 CABP7Q86V35 215 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 TBCKQ8TEA7 893 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 PCDHAC2Q9Y5I4 1007 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 OPA1O60313 960 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 PLCG1P19174 1290 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 GGCXP38435 758 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 CYP4A11Q02928 519 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 E2F5Q15329 346 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 ZFYVE27Q5T4F4 411 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 C2CD5Q86YS7 1000 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 OR8K1Q8NGG5 319 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 RRP36Q96EU6 259 aaKnown RBP14.07□□□□□ -0.16
RETREG3-201ENST00000309428 TUBE1Q9UJT0 475 aa14.07□□□□□ -0.16
RETREG3-201ENST00000309428 PCNTO95613 3336 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms