RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 ERCC4Q92889 916 aaPredicted RBP13.52□□□□□ -0.25
TRIM40-205ENST00000307859 COA7Q96BR5 231 aa13.52□□□□□ -0.25
TRIM40-205ENST00000307859 HHIPL1Q96JK4 782 aa13.52□□□□□ -0.25
TRIM40-205ENST00000307859 ARHGEF10LQ9HCE6 1279 aa13.52□□□□□ -0.25
TRIM40-205ENST00000307859 RIC8AQ9NPQ8 531 aa13.52□□□□□ -0.25
TRIM40-205ENST00000307859 LAD1O00515 517 aa13.51□□□□□ -0.25
TRIM40-205ENST00000307859 POLR2DO15514 142 aaKnown RBP13.51□□□□□ -0.25
TRIM40-205ENST00000307859 ACTN4O43707 911 aaKnown RBP13.51□□□□□ -0.25
TRIM40-205ENST00000307859 MDM2Q00987 491 aaPredicted RBP13.51□□□□□ -0.25
TRIM40-205ENST00000307859 IQCB1Q15051 598 aa13.51□□□□□ -0.25
TRIM40-205ENST00000307859 IL17AQ16552 155 aa13.51□□□□□ -0.25
TRIM40-205ENST00000307859 BTNL9Q6UXG8 535 aa13.51□□□□□ -0.25
TRIM40-205ENST00000307859 GPC2Q8N158 579 aa13.51□□□□□ -0.25
TRIM40-205ENST00000307859 SYMPKQ92797 1274 aaKnown RBP13.51□□□□□ -0.25
TRIM40-205ENST00000307859 TEPSINQ96N21 525 aa13.51□□□□□ -0.25
TRIM40-205ENST00000307859 TMX2Q9Y320 296 aa13.51□□□□□ -0.25
TRIM40-205ENST00000307859 VWA3AA6NCI4 1184 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 BMP3P12645 472 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 CAP2P40123 477 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 PRPHP41219 470 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 CLK2P49760 499 aaKnown RBP13.5□□□□□ -0.25
TRIM40-205ENST00000307859 NLRP12P59046 1061 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 RASA3Q14644 834 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 CDC37Q16543 378 aaPredicted RBP13.5□□□□□ -0.25
TRIM40-205ENST00000307859 QRICH1Q2TAL8 776 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 KANK3Q6NY19 840 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 NEK8Q86SG6 692 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 CEP57L1Q8IYX8 460 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 EPSTI1Q96J88 318 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 BPIFA3Q9BQP9 254 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 CNOT7Q9UIV1 285 aaKnown RBP13.5□□□□□ -0.25
TRIM40-205ENST00000307859 HOOK1Q9UJC3 728 aaKnown RBP13.5□□□□□ -0.25
TRIM40-205ENST00000307859 PHIPQ8WWQ0 1821 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 A0A087X0B3 334 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.5□□□□□ -0.25
TRIM40-205ENST00000307859 AP5Z1O43299 807 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 AOC2O75106 756 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 LONP1P36776 959 aaKnown RBP13.5□□□□□ -0.25
TRIM40-205ENST00000307859 GRM1Q13255 1194 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 PNOCQ13519 176 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 DPCR1Q3MIW9 517 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 HS1BP3Q53T59 392 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 SYDE2Q5VT97 1194 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 CST9Q5W186 159 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 TRIM44Q96DX7 344 aaPredicted RBP13.5□□□□□ -0.25
TRIM40-205ENST00000307859 NUP88Q99567 741 aaPredicted RBP13.5□□□□□ -0.25
TRIM40-205ENST00000307859 GLT8D2Q9H1C3 349 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 TMEM60Q9H2L4 133 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 TMEM260Q9NX78 707 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 BIN2Q9UBW5 565 aaPredicted RBP13.5□□□□□ -0.25
TRIM40-205ENST00000307859 SERTAD1Q9UHV2 236 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 GJA3Q9Y6H8 435 aa13.5□□□□□ -0.25
TRIM40-205ENST00000307859 RBBP6Q7Z6E9 1792 aaKnown RBP13.49□□□□□ -0.25
TRIM40-205ENST00000307859 A0A087WWV3 80 aa13.49□□□□□ -0.25
TRIM40-205ENST00000307859 PHF20L1A8MW92 1017 aa13.49□□□□□ -0.25
TRIM40-205ENST00000307859 RAD21O60216 631 aa13.49□□□□□ -0.25
TRIM40-205ENST00000307859 ADCY5O95622 1261 aa13.49□□□□□ -0.25
TRIM40-205ENST00000307859 POSTNQ15063 836 aa13.49□□□□□ -0.25
TRIM40-205ENST00000307859 KIF4BQ2VIQ3 1234 aa13.49□□□□□ -0.25
TRIM40-205ENST00000307859 NT5DC1Q5TFE4 455 aa13.49□□□□□ -0.25
TRIM40-205ENST00000307859 JAKMIP3Q5VZ66 844 aa13.49□□□□□ -0.25
TRIM40-205ENST00000307859 MIGA2Q7L4E1 593 aa13.49□□□□□ -0.25
TRIM40-205ENST00000307859 SAMD7Q7Z3H4 446 aa13.49□□□□□ -0.25
TRIM40-205ENST00000307859 ACER1Q8TDN7 264 aa13.49□□□□□ -0.25
TRIM40-205ENST00000307859 TBCKQ8TEA7 893 aa13.49□□□□□ -0.25
TRIM40-205ENST00000307859 CUL5Q93034 780 aa13.49□□□□□ -0.25
TRIM40-205ENST00000307859 PYM1Q9BRP8 204 aaKnown RBP13.49□□□□□ -0.25
TRIM40-205ENST00000307859 NAT10Q9H0A0 1025 aaKnown RBP13.49□□□□□ -0.25
TRIM40-205ENST00000307859 GOPCQ9HD26 462 aa13.49□□□□□ -0.25
TRIM40-205ENST00000307859 ASNSP08243 561 aa13.48□□□□□ -0.25
TRIM40-205ENST00000307859 SLFN14P0C7P3 912 aa13.48□□□□□ -0.25
TRIM40-205ENST00000307859 MRPL12P52815 198 aaKnown RBP13.48□□□□□ -0.25
TRIM40-205ENST00000307859 SOX10P56693 466 aa13.48□□□□□ -0.25
TRIM40-205ENST00000307859 ZRSR1Q15695 479 aaKnown RBP13.48□□□□□ -0.25
TRIM40-205ENST00000307859 SH3RF1Q7Z6J0 888 aa13.48□□□□□ -0.25
TRIM40-205ENST00000307859 DHX40Q8IX18 779 aaKnown RBP13.48□□□□□ -0.25
TRIM40-205ENST00000307859 PDILTQ8N807 584 aa13.48□□□□□ -0.25
TRIM40-205ENST00000307859 SH2D4AQ9H788 454 aa13.48□□□□□ -0.25
TRIM40-205ENST00000307859 CASP8AP2Q9UKL3 1982 aa13.48□□□□□ -0.25
TRIM40-205ENST00000307859 TMEM232C9JQI7 657 aa13.47□□□□□ -0.25
TRIM40-205ENST00000307859 NEMFO60524 1076 aa13.47□□□□□ -0.25
TRIM40-205ENST00000307859 OR52Z1P0C646 297 aa13.47□□□□□ -0.25
TRIM40-205ENST00000307859 SARSP49591 514 aaKnown RBP13.47□□□□□ -0.25
TRIM40-205ENST00000307859 E2F4Q16254 413 aa13.47□□□□□ -0.25
TRIM40-205ENST00000307859 LETM2Q2VYF4 491 aa13.47□□□□□ -0.25
TRIM40-205ENST00000307859 TBC1D10BQ4KMP7 808 aaPredicted RBP13.47□□□□□ -0.25
TRIM40-205ENST00000307859 KIAA1755Q5JYT7 1200 aa13.47□□□□□ -0.25
TRIM40-205ENST00000307859 DTHD1Q6ZMT9 781 aa13.47□□□□□ -0.25
TRIM40-205ENST00000307859 SAPCD2Q86UD0 394 aa13.47□□□□□ -0.25
TRIM40-205ENST00000307859 SPATA20Q8TB22 786 aa13.47□□□□□ -0.25
TRIM40-205ENST00000307859 DHX58Q96C10 678 aa13.47□□□□□ -0.25
TRIM40-205ENST00000307859 CCDC34Q96HJ3 373 aa13.47□□□□□ -0.25
TRIM40-205ENST00000307859 VCPKMTQ9H867 229 aa13.47□□□□□ -0.25
TRIM40-205ENST00000307859 PSTPIP2Q9H939 334 aa13.47□□□□□ -0.25
TRIM40-205ENST00000307859 GINM1Q9NU53 330 aa13.47□□□□□ -0.25
TRIM40-205ENST00000307859 PCDHA5Q9Y5H7 936 aa13.47□□□□□ -0.25
TRIM40-205ENST00000307859 ASTN2O75129 1339 aaPredicted RBP13.47□□□□□ -0.25
TRIM40-205ENST00000307859 BIN1O00499 593 aa13.46□□□□□ -0.25
TRIM40-205ENST00000307859 TNRC18O15417 2968 aaPredicted RBP13.46□□□□□ -0.25
TRIM40-205ENST00000307859 EDIL3O43854 480 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms