RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 SH2B2O14492 632 aaPredicted RBP17.53■□□□□ 0.4
USP42-201ENST00000306177 ABCB4P21439 1286 aa17.53■□□□□ 0.4
USP42-201ENST00000306177 PROCA1Q8NCQ7 364 aaPredicted RBP17.53■□□□□ 0.4
USP42-201ENST00000306177 LACTBP83111 547 aaPredicted RBP17.53■□□□□ 0.4
USP42-201ENST00000306177 KIF23Q02241 960 aaPredicted RBP17.53■□□□□ 0.4
USP42-201ENST00000306177 RASGRF1Q13972 1273 aa17.53■□□□□ 0.4
USP42-201ENST00000306177 TRPC6Q9Y210 931 aa17.53■□□□□ 0.4
USP42-201ENST00000306177 hCG_1984214I3L0E3 225 aa17.53■□□□□ 0.4
USP42-201ENST00000306177 ZNF713Q8N859 430 aaPredicted RBP17.53■□□□□ 0.4
USP42-201ENST00000306177 GPATCH11Q8N954 259 aa17.53■□□□□ 0.4
USP42-201ENST00000306177 PLCB1Q9NQ66 1216 aa17.53■□□□□ 0.4
USP42-201ENST00000306177 C1orf112Q9NSG2 853 aa17.53■□□□□ 0.4
USP42-201ENST00000306177 RABGAP1Q9Y3P9 1069 aa17.53■□□□□ 0.4
USP42-201ENST00000306177 EPHA10Q5JZY3 1008 aa17.53■□□□□ 0.4
USP42-201ENST00000306177 ANKRD35Q8N283 1001 aa17.53■□□□□ 0.4
USP42-201ENST00000306177 METTL13Q8N6R0 699 aa17.53■□□□□ 0.4
USP42-201ENST00000306177 TDRD7Q8NHU6 1098 aaKnown RBP17.53■□□□□ 0.4
USP42-201ENST00000306177 CDC42BPBQ9Y5S2 1711 aa17.53■□□□□ 0.4
USP42-201ENST00000306177 TULP4Q9NRJ4 1543 aa17.53■□□□□ 0.4
USP42-201ENST00000306177 ZNF500O60304 480 aaPredicted RBP17.52■□□□□ 0.4
USP42-201ENST00000306177 COPB1P53618 953 aaKnown RBP17.52■□□□□ 0.4
USP42-201ENST00000306177 POLR2FP61218 127 aaKnown RBP17.52■□□□□ 0.4
USP42-201ENST00000306177 PABPC4Q13310 644 aaKnown RBP eCLIP17.52■□□□□ 0.4
USP42-201ENST00000306177 HLFQ16534 295 aa17.52■□□□□ 0.4
USP42-201ENST00000306177 BRD3Q15059 726 aa17.52■□□□□ 0.4
USP42-201ENST00000306177 KIAA1024Q9UPX6 916 aa17.52■□□□□ 0.4
USP42-201ENST00000306177 CROCC2H7BZ55 1655 aa17.52■□□□□ 0.4
USP42-201ENST00000306177 DMP1Q13316 513 aaPredicted RBP17.52■□□□□ 0.4
USP42-201ENST00000306177 LGSNQ5TDP6 509 aa17.52■□□□□ 0.4
USP42-201ENST00000306177 CCDC125Q86Z20 511 aa17.52■□□□□ 0.4
USP42-201ENST00000306177 LARP4BQ92615 738 aaKnown RBP17.52■□□□□ 0.4
USP42-201ENST00000306177 CSRNP1Q96S65 589 aa17.52■□□□□ 0.4
USP42-201ENST00000306177 PIH1D3Q9NQM4 214 aaKnown RBP17.52■□□□□ 0.4
USP42-201ENST00000306177 ETF1P62495 437 aaKnown RBP17.52■□□□□ 0.39
USP42-201ENST00000306177 TTC31Q49AM3 519 aaPredicted RBP17.52■□□□□ 0.39
USP42-201ENST00000306177 ARMCX5Q6P1M9 558 aa17.52■□□□□ 0.39
USP42-201ENST00000306177 CCDC89Q8N998 374 aa17.52■□□□□ 0.39
USP42-201ENST00000306177 CCDC110Q8TBZ0 833 aa17.52■□□□□ 0.39
USP42-201ENST00000306177 DDX41Q9UJV9 622 aaKnown RBP17.52■□□□□ 0.39
USP42-201ENST00000306177 MMP1P03956 469 aa17.51■□□□□ 0.39
USP42-201ENST00000306177 PPP2R5EQ16537 467 aa17.51■□□□□ 0.39
USP42-201ENST00000306177 EAPPQ56P03 285 aaPredicted RBP17.51■□□□□ 0.39
USP42-201ENST00000306177 SMC1BQ8NDV3 1235 aa17.51■□□□□ 0.39
USP42-201ENST00000306177 KCNK3O14649 394 aa17.51■□□□□ 0.39
USP42-201ENST00000306177 IFNAR1P17181 557 aa17.51■□□□□ 0.39
USP42-201ENST00000306177 CYP4A11Q02928 519 aa17.51■□□□□ 0.39
USP42-201ENST00000306177 CLEC4GQ6UXB4 293 aa17.51■□□□□ 0.39
USP42-201ENST00000306177 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.51■□□□□ 0.39
USP42-201ENST00000306177 DBNDD1Q9H9R9 158 aa17.51■□□□□ 0.39
USP42-201ENST00000306177 CDC25BP30305 580 aa17.51■□□□□ 0.39
USP42-201ENST00000306177 IRX5P78411 483 aaPredicted RBP17.51■□□□□ 0.39
USP42-201ENST00000306177 CNOT6LQ96LI5 555 aaKnown RBP17.51■□□□□ 0.39
USP42-201ENST00000306177 SOS2Q07890 1332 aaPredicted RBP17.51■□□□□ 0.39
USP42-201ENST00000306177 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.51■□□□□ 0.39
USP42-201ENST00000306177 TNNC2P02585 160 aa17.51■□□□□ 0.39
USP42-201ENST00000306177 GCFC2P16383 781 aaKnown RBP17.51■□□□□ 0.39
USP42-201ENST00000306177 PDE6CP51160 858 aa17.51■□□□□ 0.39
USP42-201ENST00000306177 ZNF772Q68DY9 489 aaPredicted RBP17.51■□□□□ 0.39
USP42-201ENST00000306177 LINC00301Q8NCQ3 95 aa17.51■□□□□ 0.39
USP42-201ENST00000306177 KANSL2Q9H9L4 492 aa17.51■□□□□ 0.39
USP42-201ENST00000306177 PPANQ9NQ55 473 aaKnown RBP17.51■□□□□ 0.39
USP42-201ENST00000306177 BSDC1Q9NW68 430 aaPredicted RBP17.51■□□□□ 0.39
USP42-201ENST00000306177 SERPINB13Q9UIV8 391 aa17.51■□□□□ 0.39
USP42-201ENST00000306177 ABCC12Q96J65 1359 aa17.5■□□□□ 0.39
USP42-201ENST00000306177 ABCA6Q8N139 1617 aa17.5■□□□□ 0.39
USP42-201ENST00000306177 TCP1P17987 556 aaKnown RBP17.5■□□□□ 0.39
USP42-201ENST00000306177 NECTIN1Q15223 517 aa17.5■□□□□ 0.39
USP42-201ENST00000306177 DENND2CQ68D51 928 aa17.5■□□□□ 0.39
USP42-201ENST00000306177 RCOR1Q9UKL0 485 aa17.5■□□□□ 0.39
USP42-201ENST00000306177 FAM184BQ9ULE4 1060 aa17.5■□□□□ 0.39
USP42-201ENST00000306177 GEN1Q17RS7 908 aa17.5■□□□□ 0.39
USP42-201ENST00000306177 HHATQ5VTY9 493 aa17.5■□□□□ 0.39
USP42-201ENST00000306177 IKBKBO14920 756 aa17.5■□□□□ 0.39
USP42-201ENST00000306177 YARSP54577 528 aaKnown RBP17.5■□□□□ 0.39
USP42-201ENST00000306177 LRCH2Q5VUJ6 765 aa17.5■□□□□ 0.39
USP42-201ENST00000306177 SEPT12Q8IYM1 358 aa17.5■□□□□ 0.39
USP42-201ENST00000306177 RASGRP4Q8TDF6 673 aa17.5■□□□□ 0.39
USP42-201ENST00000306177 DHTKD1Q96HY7 919 aaPredicted RBP17.5■□□□□ 0.39
USP42-201ENST00000306177 ST7Q9NRC1 585 aa17.5■□□□□ 0.39
USP42-201ENST00000306177 OAS2P29728 719 aaKnown RBP17.5■□□□□ 0.39
USP42-201ENST00000306177 GABPB1Q06547 395 aaPredicted RBP17.5■□□□□ 0.39
USP42-201ENST00000306177 GRAPQ13588 217 aa17.5■□□□□ 0.39
USP42-201ENST00000306177 GADL1Q6ZQY3 521 aa17.5■□□□□ 0.39
USP42-201ENST00000306177 GRAPLQ8TC17 118 aaPredicted RBP17.5■□□□□ 0.39
USP42-201ENST00000306177 CCT6BQ92526 530 aa17.5■□□□□ 0.39
USP42-201ENST00000306177 EPN1Q9Y6I3 576 aaPredicted RBP17.5■□□□□ 0.39
USP42-201ENST00000306177 CLRN2A0PK11 232 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 PSDA5PKW4 1024 aaPredicted RBP17.49■□□□□ 0.39
USP42-201ENST00000306177 CIB2O75838 187 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 KRT71Q3SY84 523 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 DPY19L2Q6NUT2 758 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 TUBGCP2Q9BSJ2 902 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 NRBP2Q9NSY0 501 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 PNPLA6Q8IY17 1366 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 KRIT1O00522 736 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 BUB1O43683 1085 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 H2AFZP0C0S5 128 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 KRT15P19012 456 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 LIFRP42702 1097 aa17.49■□□□□ 0.39
USP42-201ENST00000306177 ODR4Q5SWX8 454 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms