RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 ASB14A6NK59 587 aa12.07□□□□□ -0.48
COL4A3-201ENST00000304990 ATP2A1O14983 1001 aa12.07□□□□□ -0.48
COL4A3-201ENST00000304990 NDUFB10O96000 172 aa12.07□□□□□ -0.48
COL4A3-201ENST00000304990 IFIT2P09913 472 aaKnown RBP12.07□□□□□ -0.48
COL4A3-201ENST00000304990 SSTR3P32745 418 aaPredicted RBP12.07□□□□□ -0.48
COL4A3-201ENST00000304990 FAM47CQ5HY64 1035 aa12.07□□□□□ -0.48
COL4A3-201ENST00000304990 ITPRIPQ8IWB1 547 aa12.07□□□□□ -0.48
COL4A3-201ENST00000304990 RETREG2Q8NC44 543 aa12.07□□□□□ -0.48
COL4A3-201ENST00000304990 COG6Q9Y2V7 657 aa12.07□□□□□ -0.48
COL4A3-201ENST00000304990 PRRC2BQ5JSZ5 2229 aaKnown RBP12.06□□□□□ -0.48
COL4A3-201ENST00000304990 PI4K2BG5E9Z4 385 aa12.06□□□□□ -0.48
COL4A3-201ENST00000304990 CYP2C9P11712 490 aa12.06□□□□□ -0.48
COL4A3-201ENST00000304990 NKX3-2P78367 333 aa12.06□□□□□ -0.48
COL4A3-201ENST00000304990 CNTN2Q02246 1040 aa12.06□□□□□ -0.48
COL4A3-201ENST00000304990 TAP1Q03518 808 aa12.06□□□□□ -0.48
COL4A3-201ENST00000304990 IKQ13123 557 aaPredicted RBP12.06□□□□□ -0.48
COL4A3-201ENST00000304990 GRB10Q13322 594 aa12.06□□□□□ -0.48
COL4A3-201ENST00000304990 HSP90AB4PQ58FF6 505 aa12.06□□□□□ -0.48
COL4A3-201ENST00000304990 EEPD1Q7L9B9 569 aa12.06□□□□□ -0.48
COL4A3-201ENST00000304990 CLASRPQ8N2M8 674 aaKnown RBP12.06□□□□□ -0.48
COL4A3-201ENST00000304990 PHOSPHO2Q8TCD6 241 aa12.06□□□□□ -0.48
COL4A3-201ENST00000304990 KHSRPQ92945 711 aaKnown RBP eCLIP12.06□□□□□ -0.48
COL4A3-201ENST00000304990 FGD4Q96M96 766 aa12.06□□□□□ -0.48
COL4A3-201ENST00000304990 AGBL1Q96MI9 1066 aa12.06□□□□□ -0.48
COL4A3-201ENST00000304990 ALDH8A1Q9H2A2 487 aaPredicted RBP12.06□□□□□ -0.48
COL4A3-201ENST00000304990 ACAD9Q9H845 621 aa12.06□□□□□ -0.48
COL4A3-201ENST00000304990 SLC38A10Q9HBR0 1119 aa12.06□□□□□ -0.48
COL4A3-201ENST00000304990 GPHNQ9NQX3 736 aaPredicted RBP12.06□□□□□ -0.48
COL4A3-201ENST00000304990 ARPP21Q9UBL0 812 aaPredicted RBP12.06□□□□□ -0.48
COL4A3-201ENST00000304990 CLIP2Q9UDT6 1046 aa12.06□□□□□ -0.48
COL4A3-201ENST00000304990 FEM1BQ9UK73 627 aa12.06□□□□□ -0.48
COL4A3-201ENST00000304990 ASTN1O14525 1302 aa12.06□□□□□ -0.48
COL4A3-201ENST00000304990 GRIN2DO15399 1336 aa12.06□□□□□ -0.48
COL4A3-201ENST00000304990 EPOPA6NHQ4 379 aa12.05□□□□□ -0.48
COL4A3-201ENST00000304990 PRR33A8MZF0 331 aa12.05□□□□□ -0.48
COL4A3-201ENST00000304990 MYL3P08590 195 aa12.05□□□□□ -0.48
COL4A3-201ENST00000304990 SMPD1P17405 629 aa12.05□□□□□ -0.48
COL4A3-201ENST00000304990 RFC2P35250 354 aa12.05□□□□□ -0.48
COL4A3-201ENST00000304990 ADD2P35612 726 aa12.05□□□□□ -0.48
COL4A3-201ENST00000304990 KCNJ6P48051 423 aa12.05□□□□□ -0.48
COL4A3-201ENST00000304990 MRE11P49959 708 aa12.05□□□□□ -0.48
COL4A3-201ENST00000304990 OAZ1P54368 228 aa12.05□□□□□ -0.48
COL4A3-201ENST00000304990 SLFNL1Q499Z3 407 aa12.05□□□□□ -0.48
COL4A3-201ENST00000304990 IQSEC1Q6DN90 963 aa12.05□□□□□ -0.48
COL4A3-201ENST00000304990 HERC6Q8IVU3 1022 aa12.05□□□□□ -0.48
COL4A3-201ENST00000304990 ZBED2Q9BTP6 218 aa12.05□□□□□ -0.48
COL4A3-201ENST00000304990 KATNBL1Q9H079 304 aa12.05□□□□□ -0.48
COL4A3-201ENST00000304990 C11orf16Q9NQ32 467 aa12.05□□□□□ -0.48
COL4A3-201ENST00000304990 TRMT13Q9NUP7 481 aaKnown RBP12.05□□□□□ -0.48
COL4A3-201ENST00000304990 PAG1Q9NWQ8 432 aa12.05□□□□□ -0.48
COL4A3-201ENST00000304990 NYAP2Q9P242 653 aa12.05□□□□□ -0.48
COL4A3-201ENST00000304990 GNEQ9Y223 722 aaKnown RBP12.05□□□□□ -0.48
COL4A3-201ENST00000304990 GREB1LQ9C091 1923 aaPredicted RBP12.05□□□□□ -0.48
COL4A3-201ENST00000304990 TNKSO95271 1327 aa12.05□□□□□ -0.48
COL4A3-201ENST00000304990 BDP1A6H8Y1 2624 aa12.05□□□□□ -0.48
COL4A3-201ENST00000304990 TANC1Q9C0D5 1861 aa12.04□□□□□ -0.48
COL4A3-201ENST00000304990 MINDY4BA8MYZ0 360 aa12.04□□□□□ -0.48
COL4A3-201ENST00000304990 PTGS1P23219 599 aa12.04□□□□□ -0.48
COL4A3-201ENST00000304990 CTR9Q6PD62 1173 aa12.04□□□□□ -0.48
COL4A3-201ENST00000304990 KIAA1211Q6ZU35 1233 aa12.04□□□□□ -0.48
COL4A3-201ENST00000304990 FBXO16Q8IX29 292 aaPredicted RBP12.04□□□□□ -0.48
COL4A3-201ENST00000304990 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.04□□□□□ -0.48
COL4A3-201ENST00000304990 CRBNQ96SW2 442 aa12.04□□□□□ -0.48
COL4A3-201ENST00000304990 PDGFCQ9NRA1 345 aa12.04□□□□□ -0.48
COL4A3-201ENST00000304990 RNF146Q9NTX7 359 aa12.04□□□□□ -0.48
COL4A3-201ENST00000304990 POLR3EQ9NVU0 708 aa12.04□□□□□ -0.48
COL4A3-201ENST00000304990 NOD1Q9Y239 953 aa12.04□□□□□ -0.48
COL4A3-201ENST00000304990 Q9Y3F1 56 aa12.04□□□□□ -0.48
COL4A3-201ENST00000304990 ZNF536O15090 1300 aa12.04□□□□□ -0.48
COL4A3-201ENST00000304990 SOWAHBA6NEL2 793 aa12.03□□□□□ -0.48
COL4A3-201ENST00000304990 FDX1P10109 184 aa12.03□□□□□ -0.48
COL4A3-201ENST00000304990 ALAS1P13196 640 aa12.03□□□□□ -0.48
COL4A3-201ENST00000304990 ALADP13716 330 aa12.03□□□□□ -0.48
COL4A3-201ENST00000304990 CHMP4BP1P59074 171 aa12.03□□□□□ -0.48
COL4A3-201ENST00000304990 BRDTQ58F21 947 aaPredicted RBP12.03□□□□□ -0.48
COL4A3-201ENST00000304990 ZSCAN25Q6NSZ9 544 aa12.03□□□□□ -0.48
COL4A3-201ENST00000304990 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.03□□□□□ -0.48
COL4A3-201ENST00000304990 ZNF444Q8N0Y2 327 aaPredicted RBP12.03□□□□□ -0.48
COL4A3-201ENST00000304990 GJD3Q8N144 294 aa12.03□□□□□ -0.48
COL4A3-201ENST00000304990 LRRC47Q8N1G4 583 aaKnown RBP12.03□□□□□ -0.48
COL4A3-201ENST00000304990 FAM133AQ8N9E0 248 aa12.03□□□□□ -0.48
COL4A3-201ENST00000304990 RHPN1Q8TCX5 695 aa12.03□□□□□ -0.48
COL4A3-201ENST00000304990 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.03□□□□□ -0.48
COL4A3-201ENST00000304990 BOLA2Q9H3K6 86 aa12.03□□□□□ -0.48
COL4A3-201ENST00000304990 ZNF287Q9HBT7 754 aa12.03□□□□□ -0.48
COL4A3-201ENST00000304990 A1CFQ9NQ94 594 aaKnown RBP12.03□□□□□ -0.48
COL4A3-201ENST00000304990 MTUS1Q9ULD2 1270 aa12.03□□□□□ -0.48
COL4A3-201ENST00000304990 BMP3P12645 472 aa12.02□□□□□ -0.49
COL4A3-201ENST00000304990 RASA1P20936 1047 aa12.02□□□□□ -0.49
COL4A3-201ENST00000304990 CPT1AP50416 773 aa12.02□□□□□ -0.49
COL4A3-201ENST00000304990 STAT2P52630 851 aa12.02□□□□□ -0.49
COL4A3-201ENST00000304990 BFSP2Q13515 415 aa12.02□□□□□ -0.49
COL4A3-201ENST00000304990 TKFCQ3LXA3 575 aa12.02□□□□□ -0.49
COL4A3-201ENST00000304990 SLFN13Q68D06 897 aa12.02□□□□□ -0.49
COL4A3-201ENST00000304990 CEP85Q6P2H3 762 aa12.02□□□□□ -0.49
COL4A3-201ENST00000304990 GDPD5Q8WTR4 605 aa12.02□□□□□ -0.49
COL4A3-201ENST00000304990 CHMP4CQ96CF2 233 aa12.02□□□□□ -0.49
COL4A3-201ENST00000304990 TRERF1Q96PN7 1200 aa12.02□□□□□ -0.49
COL4A3-201ENST00000304990 MTG1Q9BT17 334 aaPredicted RBP12.02□□□□□ -0.49
COL4A3-201ENST00000304990 UBE2ZQ9H832 354 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms