RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 LGALS16A8MUM7 142 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 H7C1D1 291 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 FXR2P51116 673 aaKnown RBP eCLIP8.12□□□□□ -1.11
RGPD3-201ENST00000304514 GRB10Q13322 594 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 TXNRD1Q16881 649 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 CYP26C1Q6V0L0 522 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 ZNF662Q6ZS27 426 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 TEX11Q8IYF3 940 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 CARD6Q9BX69 1037 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 EEF1GP26641 437 aaKnown RBP8.12□□□□□ -1.11
RGPD3-201ENST00000304514 HERVK_113P62684 666 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 PPP1R18Q6NYC8 613 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 WDR59Q6PJI9 974 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 USP17L2Q6R6M4 530 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 CABP7Q86V35 215 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 PPFIBP1Q86W92 1011 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 ZSCAN29Q8IWY8 852 aaPredicted RBP8.12□□□□□ -1.11
RGPD3-201ENST00000304514 ACRBPQ8NEB7 543 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 PPEF1O14829 653 aaPredicted RBP8.12□□□□□ -1.11
RGPD3-201ENST00000304514 PLCG2P16885 1265 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 ARHGAP29Q52LW3 1261 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 CERS5Q8N5B7 392 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 ZNF287Q9HBT7 754 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 DDX4Q9NQI0 724 aaKnown RBP8.12□□□□□ -1.11
RGPD3-201ENST00000304514 CAPN11Q9UMQ6 739 aa8.12□□□□□ -1.11
RGPD3-201ENST00000304514 LOXHD1Q8IVV2 1947 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.11□□□□□ -1.11
RGPD3-201ENST00000304514 SMCO2A6NFE2 343 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 SLC37A4O43826 429 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 TXLNAP40222 546 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 MEA1Q16626 185 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 FILIP1LQ4L180 1135 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 TMEM119Q4V9L6 283 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 SP8Q8IXZ3 490 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 KIAA0895Q8NCT3 520 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 NOC3LQ8WTT2 800 aaKnown RBP8.11□□□□□ -1.11
RGPD3-201ENST00000304514 MTMR8Q96EF0 704 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 PNMA5Q96PV4 448 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 IRX2Q9BZI1 471 aaPredicted RBP8.11□□□□□ -1.11
RGPD3-201ENST00000304514 ANKZF1Q9H8Y5 726 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 TPM1P09493 284 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 NAPAP54920 295 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 GNG11P61952 73 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 GABPB1Q06547 395 aaPredicted RBP8.11□□□□□ -1.11
RGPD3-201ENST00000304514 SPAG1Q07617 926 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 EHHADHQ08426 723 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 NONOQ15233 471 aaKnown RBP eCLIP8.11□□□□□ -1.11
RGPD3-201ENST00000304514 DHTKD1Q96HY7 919 aaPredicted RBP8.11□□□□□ -1.11
RGPD3-201ENST00000304514 MTMR4Q9NYA4 1195 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 TTF2Q9UNY4 1162 aaKnown RBP8.11□□□□□ -1.11
RGPD3-201ENST00000304514 ATF5Q9Y2D1 282 aaPredicted RBP8.11□□□□□ -1.11
RGPD3-201ENST00000304514 BBOX1O75936 387 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 URI1O94763 535 aaPredicted RBP8.11□□□□□ -1.11
RGPD3-201ENST00000304514 SRGNP10124 158 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 PLA2G4AP47712 749 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 AMPD2Q01433 879 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 NEK8Q86SG6 692 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 TMTC1Q8IUR5 882 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 CCDC12Q8WUD4 166 aaPredicted RBP8.11□□□□□ -1.11
RGPD3-201ENST00000304514 VPS16Q9H269 839 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 RIC8AQ9NPQ8 531 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 SUGT1Q9Y2Z0 365 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 LOC285556D6RIA3 1793 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 COL2A1P02458 1487 aaPredicted RBP8.11□□□□□ -1.11
RGPD3-201ENST00000304514 PARP14Q460N5 1801 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 FRMPD2Q68DX3 1309 aaPredicted RBP8.11□□□□□ -1.11
RGPD3-201ENST00000304514 MFSD14BQ5SR56 506 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 KRT222Q8N1A0 295 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 GPR161Q8N6U8 529 aaKnown RBP8.11□□□□□ -1.11
RGPD3-201ENST00000304514 C6orf50Q9HD87 102 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 BLOC1S4Q9NUP1 217 aa8.11□□□□□ -1.11
RGPD3-201ENST00000304514 A0A1W2PQJ5 194 aa8.1□□□□□ -1.11
RGPD3-201ENST00000304514 NKRFO15226 690 aaKnown RBP eCLIP8.1□□□□□ -1.11
RGPD3-201ENST00000304514 SASH3O75995 380 aa8.1□□□□□ -1.11
RGPD3-201ENST00000304514 SHMT1P34896 483 aa8.1□□□□□ -1.11
RGPD3-201ENST00000304514 UBXN1Q04323 297 aa8.1□□□□□ -1.11
RGPD3-201ENST00000304514 ANKRD40Q6AI12 368 aa8.1□□□□□ -1.11
RGPD3-201ENST00000304514 TBC1D22AQ8WUA7 517 aa8.1□□□□□ -1.11
RGPD3-201ENST00000304514 TRIM9Q9C026 710 aa8.1□□□□□ -1.11
RGPD3-201ENST00000304514 SEMA6BQ9H3T3 888 aa8.1□□□□□ -1.11
RGPD3-201ENST00000304514 BIN2Q9UBW5 565 aaPredicted RBP8.1□□□□□ -1.11
RGPD3-201ENST00000304514 KLK7P49862 253 aa8.1□□□□□ -1.11
RGPD3-201ENST00000304514 ECM1Q16610 540 aa8.1□□□□□ -1.11
RGPD3-201ENST00000304514 TBCKQ8TEA7 893 aa8.1□□□□□ -1.11
RGPD3-201ENST00000304514 CPLX3Q8WVH0 158 aa8.1□□□□□ -1.11
RGPD3-201ENST00000304514 ST7Q9NRC1 585 aa8.1□□□□□ -1.11
RGPD3-201ENST00000304514 PNMA6AP0CW24 399 aaPredicted RBP8.1□□□□□ -1.11
RGPD3-201ENST00000304514 FCER1AP12319 257 aa8.1□□□□□ -1.11
RGPD3-201ENST00000304514 ASPRV1Q53RT3 343 aa8.1□□□□□ -1.11
RGPD3-201ENST00000304514 EPC1Q9H2F5 836 aa8.1□□□□□ -1.11
RGPD3-201ENST00000304514 LZTFL1Q9NQ48 299 aa8.1□□□□□ -1.11
RGPD3-201ENST00000304514 AFF2P51816 1311 aa8.1□□□□□ -1.11
RGPD3-201ENST00000304514 SEC31AO94979 1220 aaKnown RBP8.1□□□□□ -1.11
RGPD3-201ENST00000304514 CC2D1AQ6P1N0 951 aaPredicted RBP8.1□□□□□ -1.11
RGPD3-201ENST00000304514 SLF2Q8IX21 1173 aa8.1□□□□□ -1.11
RGPD3-201ENST00000304514 P2RX5Q93086 422 aa8.1□□□□□ -1.11
RGPD3-201ENST00000304514 PURBQ96QR8 312 aaKnown RBP8.1□□□□□ -1.11
RGPD3-201ENST00000304514 PLIN2Q99541 437 aa8.1□□□□□ -1.11
RGPD3-201ENST00000304514 MYO1AQ9UBC5 1043 aa8.1□□□□□ -1.11
RGPD3-201ENST00000304514 MAPK8IP1Q9UQF2 711 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms