RNA–Protein interactions for RNA: ENST00000304449.5

NKRF-201, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-201ENST00000304449 CCDC152Q4G0S7 254 aa8.87□□□□□ -0.99
NKRF-201ENST00000304449 PARP10Q53GL7 1025 aa8.87□□□□□ -0.99
NKRF-201ENST00000304449 ZNF658Q5TYW1 1059 aaPredicted RBP8.87□□□□□ -0.99
NKRF-201ENST00000304449 CTCFLQ8NI51 663 aaPredicted RBP8.87□□□□□ -0.99
NKRF-201ENST00000304449 ZNF526Q8TF50 670 aaPredicted RBP8.87□□□□□ -0.99
NKRF-201ENST00000304449 RRP36Q96EU6 259 aaKnown RBP8.87□□□□□ -0.99
NKRF-201ENST00000304449 DNAJC7Q99615 494 aa8.87□□□□□ -0.99
NKRF-201ENST00000304449 TTF2Q9UNY4 1162 aaKnown RBP8.87□□□□□ -0.99
NKRF-201ENST00000304449 CTNND2Q9UQB3 1225 aa8.87□□□□□ -0.99
NKRF-201ENST00000304449 CDK5RAP2Q96SN8 1893 aa8.87□□□□□ -0.99
NKRF-201ENST00000304449 FAM205AQ6ZU69 1335 aa8.87□□□□□ -0.99
NKRF-201ENST00000304449 GTPBP6O43824 516 aaPredicted RBP8.87□□□□□ -0.99
NKRF-201ENST00000304449 PRPF6O94906 941 aaKnown RBP8.87□□□□□ -0.99
NKRF-201ENST00000304449 CRKLP46109 303 aaKnown RBP8.87□□□□□ -0.99
NKRF-201ENST00000304449 COPB1P53618 953 aaKnown RBP8.87□□□□□ -0.99
NKRF-201ENST00000304449 PMS1P54277 932 aaKnown RBP8.87□□□□□ -0.99
NKRF-201ENST00000304449 C2orf54Q08AI8 447 aa8.87□□□□□ -0.99
NKRF-201ENST00000304449 CCDC88AQ3V6T2 1871 aa8.87□□□□□ -0.99
NKRF-201ENST00000304449 LRCH2Q5VUJ6 765 aa8.87□□□□□ -0.99
NKRF-201ENST00000304449 ARL6IP4Q66PJ3 421 aaKnown RBP8.87□□□□□ -0.99
NKRF-201ENST00000304449 FBXO33Q7Z6M2 555 aa8.87□□□□□ -0.99
NKRF-201ENST00000304449 TMTC1Q8IUR5 882 aa8.87□□□□□ -0.99
NKRF-201ENST00000304449 COG1Q8WTW3 980 aa8.87□□□□□ -0.99
NKRF-201ENST00000304449 NSUN4Q96CB9 384 aaKnown RBP8.87□□□□□ -0.99
NKRF-201ENST00000304449 FAM84BQ96KN1 310 aaPredicted RBP8.87□□□□□ -0.99
NKRF-201ENST00000304449 MACROD2A1Z1Q3 448 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 NMT2O60551 498 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 CALM1P0DP23 149 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 CALM2P0DP24 149 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 CALM3P0DP25 149 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 SF3B3Q15393 1217 aaKnown RBP8.86□□□□□ -0.99
NKRF-201ENST00000304449 MEA1Q16626 185 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 KCTD19Q17RG1 926 aaPredicted RBP8.86□□□□□ -0.99
NKRF-201ENST00000304449 FILIP1LQ4L180 1135 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 IFIT1BQ5T764 474 aaKnown RBP8.86□□□□□ -0.99
NKRF-201ENST00000304449 WDR93Q6P2C0 686 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 TRAPPC11Q7Z392 1133 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 ADSSL1Q8N142 457 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 CHP1Q99653 195 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 CCDC87Q9NVE4 849 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 GNL3LQ9NVN8 582 aaKnown RBP8.86□□□□□ -0.99
NKRF-201ENST00000304449 LRP2BPQ9P2M1 347 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 ODF2LQ9ULJ1 636 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 CPP00450 1065 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 ATP1A1P05023 1023 aaKnown RBP8.86□□□□□ -0.99
NKRF-201ENST00000304449 PRCPP42785 496 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 GYG1P46976 350 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 CDR1P51861 262 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 TUBB4BP68371 445 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 UBE4AQ14139 1066 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 WHAMMP3Q1A5X7 153 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 ANKS1AQ92625 1134 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 BLZF1Q9H2G9 400 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 MINDY4BA8MYZ0 360 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 PSMD14O00487 310 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 KRT9P35527 623 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 HERVK_113P62684 666 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 IFT88Q13099 833 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 EZH2Q15910 746 aaKnown RBP8.86□□□□□ -0.99
NKRF-201ENST00000304449 SBK1Q52WX2 424 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 CCDC122Q5T0U0 273 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 NAIF1Q69YI7 327 aaPredicted RBP8.86□□□□□ -0.99
NKRF-201ENST00000304449 TYW1BQ6NUM6 668 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 CATIPQ7Z7H3 387 aa8.86□□□□□ -0.99
NKRF-201ENST00000304449 PURBQ96QR8 312 aaKnown RBP8.86□□□□□ -0.99
NKRF-201ENST00000304449 BSDC1Q9NW68 430 aaPredicted RBP8.86□□□□□ -0.99
NKRF-201ENST00000304449 A0A1W2PQC6 194 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 BACH1O14867 736 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 SCG2P13521 617 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 SEC24CP53992 1094 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 USP14P54578 494 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 TRIM14Q14142 442 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 NAA25Q14CX7 972 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 CYP26C1Q6V0L0 522 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 KIAA1328Q86T90 577 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 POTEDQ86YR6 584 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 ARL8AQ96BM9 186 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 DCP1AQ9NPI6 582 aaPredicted RBP8.85□□□□□ -0.99
NKRF-201ENST00000304449 TAB2Q9NYJ8 693 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 SMARCAL1Q9NZC9 954 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 IQSEC3Q9UPP2 1182 aaPredicted RBP8.85□□□□□ -0.99
NKRF-201ENST00000304449 FLT1P17948 1338 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 KCNJ18B7U540 433 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 ZPR1O75312 459 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 RPN1P04843 607 aaKnown RBP8.85□□□□□ -0.99
NKRF-201ENST00000304449 XBP1P17861 261 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 CXCR5P32302 372 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 LONP1P36776 959 aaKnown RBP8.85□□□□□ -0.99
NKRF-201ENST00000304449 IGHMBP2P38935 993 aaKnown RBP8.85□□□□□ -0.99
NKRF-201ENST00000304449 PEX19P40855 299 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 HSPA2P54652 639 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 GUCY1A3Q02108 690 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 PAK1Q13153 545 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 KCNJ12Q14500 433 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 KCNB1Q14721 858 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 PAPD7Q5XG87 772 aaKnown RBP8.85□□□□□ -0.99
NKRF-201ENST00000304449 TMED8Q6PL24 325 aaPredicted RBP8.85□□□□□ -0.99
NKRF-201ENST00000304449 HDAC7Q8WUI4 952 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 VEZTQ9HBM0 779 aa8.85□□□□□ -0.99
NKRF-201ENST00000304449 SH3GLB2Q9NR46 395 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms