RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 ERO1AQ96HE7 468 aa23.16■■□□□ 1.3
SCAMP3-201ENST00000302631 TRERF1Q96PN7 1200 aa23.16■■□□□ 1.3
SCAMP3-201ENST00000302631 FBXO40Q9UH90 709 aa23.16■■□□□ 1.3
SCAMP3-201ENST00000302631 PCDHA1Q9Y5I3 950 aa23.16■■□□□ 1.3
SCAMP3-201ENST00000302631 K7ELQ4 463 aaPredicted RBP23.15■■□□□ 1.3
SCAMP3-201ENST00000302631 STRNO43815 780 aa23.15■■□□□ 1.3
SCAMP3-201ENST00000302631 DEXIO95424 95 aa23.15■■□□□ 1.3
SCAMP3-201ENST00000302631 ALAS1P13196 640 aa23.15■■□□□ 1.3
SCAMP3-201ENST00000302631 SCG2P13521 617 aa23.15■■□□□ 1.3
SCAMP3-201ENST00000302631 FDPSP14324 419 aaKnown RBP23.15■■□□□ 1.3
SCAMP3-201ENST00000302631 TAL1P17542 331 aaPredicted RBP23.15■■□□□ 1.3
SCAMP3-201ENST00000302631 GHRHRQ02643 423 aa23.15■■□□□ 1.3
SCAMP3-201ENST00000302631 NCAPG2Q86XI2 1143 aa23.15■■□□□ 1.3
SCAMP3-201ENST00000302631 TRIM22Q8IYM9 498 aa23.15■■□□□ 1.3
SCAMP3-201ENST00000302631 ABRAQ8N0Z2 381 aa23.15■■□□□ 1.3
SCAMP3-201ENST00000302631 PIBF1Q8WXW3 757 aa23.15■■□□□ 1.3
SCAMP3-201ENST00000302631 ARHGAP39Q9C0H5 1083 aa23.15■■□□□ 1.3
SCAMP3-201ENST00000302631 RNF146Q9NTX7 359 aa23.15■■□□□ 1.3
SCAMP3-201ENST00000302631 RBBP6Q7Z6E9 1792 aaKnown RBP23.14■■□□□ 1.3
SCAMP3-201ENST00000302631 PSMC4P43686 418 aa23.14■■□□□ 1.29
SCAMP3-201ENST00000302631 FCGRTP55899 365 aa23.14■■□□□ 1.29
SCAMP3-201ENST00000302631 USH1GQ495M9 461 aa23.14■■□□□ 1.29
SCAMP3-201ENST00000302631 MUM1L1Q5H9M0 696 aa23.14■■□□□ 1.29
SCAMP3-201ENST00000302631 PLEKHH3Q7Z736 793 aa23.14■■□□□ 1.29
SCAMP3-201ENST00000302631 CD99L2Q8TCZ2 262 aa23.14■■□□□ 1.29
SCAMP3-201ENST00000302631 COA7Q96BR5 231 aa23.14■■□□□ 1.29
SCAMP3-201ENST00000302631 TRIM47Q96LD4 638 aa23.14■■□□□ 1.29
SCAMP3-201ENST00000302631 ACAD9Q9H845 621 aa23.14■■□□□ 1.29
SCAMP3-201ENST00000302631 BARHL2Q9NY43 387 aa23.14■■□□□ 1.29
SCAMP3-201ENST00000302631 MRPL11Q9Y3B7 192 aaKnown RBP23.14■■□□□ 1.29
SCAMP3-201ENST00000302631 PTPDC1A2A3K4 754 aa23.13■■□□□ 1.29
SCAMP3-201ENST00000302631 OPLAHO14841 1288 aa23.13■■□□□ 1.29
SCAMP3-201ENST00000302631 GNRH1P01148 92 aa23.13■■□□□ 1.29
SCAMP3-201ENST00000302631 PTPREP23469 700 aa23.13■■□□□ 1.29
SCAMP3-201ENST00000302631 AKAP17AQ02040 695 aaKnown RBP23.13■■□□□ 1.29
SCAMP3-201ENST00000302631 KIF22Q14807 665 aa23.13■■□□□ 1.29
SCAMP3-201ENST00000302631 MORN1Q5T089 497 aa23.13■■□□□ 1.29
SCAMP3-201ENST00000302631 WWC2Q6AWC2 1192 aa23.13■■□□□ 1.29
SCAMP3-201ENST00000302631 GJD2Q9UKL4 321 aa23.13■■□□□ 1.29
SCAMP3-201ENST00000302631 JAK2O60674 1132 aa23.12■■□□□ 1.29
SCAMP3-201ENST00000302631 PPFIA3O75145 1194 aa23.12■■□□□ 1.29
SCAMP3-201ENST00000302631 GRB14Q14449 540 aa23.12■■□□□ 1.29
SCAMP3-201ENST00000302631 TYW1BQ6NUM6 668 aa23.12■■□□□ 1.29
SCAMP3-201ENST00000302631 FAM177A1Q8N128 213 aaPredicted RBP23.12■■□□□ 1.29
SCAMP3-201ENST00000302631 SAMD3Q8N6K7 520 aa23.12■■□□□ 1.29
SCAMP3-201ENST00000302631 USP6NLQ92738 828 aa23.12■■□□□ 1.29
SCAMP3-201ENST00000302631 LCTP09848 1927 aa23.12■■□□□ 1.29
SCAMP3-201ENST00000302631 SLC15A5A6NIM6 579 aa23.11■■□□□ 1.29
SCAMP3-201ENST00000302631 STXBP3O00186 592 aa23.11■■□□□ 1.29
SCAMP3-201ENST00000302631 NFIBO00712 420 aa23.11■■□□□ 1.29
SCAMP3-201ENST00000302631 PPP1R18Q6NYC8 613 aa23.11■■□□□ 1.29
SCAMP3-201ENST00000302631 CCAR1Q8IX12 1150 aaKnown RBP23.11■■□□□ 1.29
SCAMP3-201ENST00000302631 SH3GLB2Q9NR46 395 aa23.11■■□□□ 1.29
SCAMP3-201ENST00000302631 ORC3Q9UBD5 711 aaPredicted RBP23.11■■□□□ 1.29
SCAMP3-201ENST00000302631 TNPO2O14787 897 aaKnown RBP23.1■■□□□ 1.29
SCAMP3-201ENST00000302631 FCER1AP12319 257 aa23.1■■□□□ 1.29
SCAMP3-201ENST00000302631 SLC4A3P48751 1232 aa23.1■■□□□ 1.29
SCAMP3-201ENST00000302631 LBX1P52954 281 aa23.1■■□□□ 1.29
SCAMP3-201ENST00000302631 HMGN5P82970 282 aaKnown RBP23.1■■□□□ 1.29
SCAMP3-201ENST00000302631 ARHGEF6Q15052 776 aa23.1■■□□□ 1.29
SCAMP3-201ENST00000302631 TEX2Q8IWB9 1127 aa23.1■■□□□ 1.29
SCAMP3-201ENST00000302631 HSCBQ8IWL3 235 aa23.1■■□□□ 1.29
SCAMP3-201ENST00000302631 GPKOWQ92917 476 aaPredicted RBP eCLIP23.1■■□□□ 1.29
SCAMP3-201ENST00000302631 SHISA4Q96DD7 197 aa23.1■■□□□ 1.29
SCAMP3-201ENST00000302631 A1CFQ9NQ94 594 aaKnown RBP23.1■■□□□ 1.29
SCAMP3-201ENST00000302631 HOMER2Q9NSB8 354 aa23.1■■□□□ 1.29
SCAMP3-201ENST00000302631 MAP3K20Q9NYL2 800 aaKnown RBP23.1■■□□□ 1.29
SCAMP3-201ENST00000302631 PLXNA1Q9UIW2 1896 aa23.1■■□□□ 1.29
SCAMP3-201ENST00000302631 DNAJC25-GNG10A0A024R161 153 aa23.09■■□□□ 1.29
SCAMP3-201ENST00000302631 HEATR3Q7Z4Q2 680 aa23.09■■□□□ 1.29
SCAMP3-201ENST00000302631 MCF2L2Q86YR7 1114 aa23.09■■□□□ 1.29
SCAMP3-201ENST00000302631 INTS4Q96HW7 963 aaKnown RBP23.09■■□□□ 1.29
SCAMP3-201ENST00000302631 MMP19Q99542 508 aa23.09■■□□□ 1.29
SCAMP3-201ENST00000302631 IVNS1ABPQ9Y6Y0 642 aa23.09■■□□□ 1.29
SCAMP3-201ENST00000302631 ESYT2A0FGR8 921 aa23.08■■□□□ 1.29
SCAMP3-201ENST00000302631 DTNBO60941 627 aa23.08■■□□□ 1.29
SCAMP3-201ENST00000302631 HSD17B4P51659 736 aa23.08■■□□□ 1.29
SCAMP3-201ENST00000302631 WASF1Q92558 559 aa23.08■■□□□ 1.29
SCAMP3-201ENST00000302631 TBC1D5Q92609 795 aa23.08■■□□□ 1.29
SCAMP3-201ENST00000302631 CYP39A1Q9NYL5 469 aa23.08■■□□□ 1.29
SCAMP3-201ENST00000302631 PFASO15067 1338 aa23.08■■□□□ 1.29
SCAMP3-201ENST00000302631 HOXC6P09630 235 aa23.08■■□□□ 1.28
SCAMP3-201ENST00000302631 KCTD2Q14681 263 aa23.08■■□□□ 1.28
SCAMP3-201ENST00000302631 WDR78Q5VTH9 848 aa23.08■■□□□ 1.28
SCAMP3-201ENST00000302631 SOCS4Q8WXH5 440 aa23.08■■□□□ 1.28
SCAMP3-201ENST00000302631 AIFM3Q96NN9 605 aa23.08■■□□□ 1.28
SCAMP3-201ENST00000302631 ZMYND12Q9H0C1 365 aa23.08■■□□□ 1.28
SCAMP3-201ENST00000302631 PRDM10Q9NQV6 1147 aa23.08■■□□□ 1.28
SCAMP3-201ENST00000302631 SRRDQ9UH36 339 aa23.08■■□□□ 1.28
SCAMP3-201ENST00000302631 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.08■■□□□ 1.28
SCAMP3-201ENST00000302631 PIK3CDO00329 1044 aa23.07■■□□□ 1.28
SCAMP3-201ENST00000302631 HOXD10P28358 340 aa23.07■■□□□ 1.28
SCAMP3-201ENST00000302631 ADORA2AP29274 412 aa23.07■■□□□ 1.28
SCAMP3-201ENST00000302631 NAPAP54920 295 aa23.07■■□□□ 1.28
SCAMP3-201ENST00000302631 PRMT2P55345 433 aa23.07■■□□□ 1.28
SCAMP3-201ENST00000302631 ANKRD35Q8N283 1001 aa23.07■■□□□ 1.28
SCAMP3-201ENST00000302631 CCDC12Q8WUD4 166 aaPredicted RBP23.07■■□□□ 1.28
SCAMP3-201ENST00000302631 DDX11Q96FC9 970 aa23.07■■□□□ 1.28
SCAMP3-201ENST00000302631 NUDT12Q9BQG2 462 aa23.07■■□□□ 1.28
SCAMP3-201ENST00000302631 MEIS2O14770 477 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms