RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 LEXMQ3ZCV2 418 aa7.77□□□□□ -1.17
ITGB1-201ENST00000302278 NFRKBQ6P4R8 1299 aa7.77□□□□□ -1.17
ITGB1-201ENST00000302278 PPP1R12CQ9BZL4 782 aa7.77□□□□□ -1.17
ITGB1-201ENST00000302278 ACAD9Q9H845 621 aa7.77□□□□□ -1.17
ITGB1-201ENST00000302278 PAG1Q9NWQ8 432 aa7.77□□□□□ -1.17
ITGB1-201ENST00000302278 FAM160B2Q86V87 743 aa7.77□□□□□ -1.17
ITGB1-201ENST00000302278 AMOTL1Q8IY63 956 aa7.77□□□□□ -1.17
ITGB1-201ENST00000302278 HLA-CQ95604 372 aa7.77□□□□□ -1.17
ITGB1-201ENST00000302278 NECAB3Q96P71 396 aaPredicted RBP7.77□□□□□ -1.17
ITGB1-201ENST00000302278 POLR3EQ9NVU0 708 aa7.77□□□□□ -1.17
ITGB1-201ENST00000302278 USP17L12C9JPN9 530 aa7.76□□□□□ -1.17
ITGB1-201ENST00000302278 USP17L21D6R901 530 aa7.76□□□□□ -1.17
ITGB1-201ENST00000302278 CCER2I3L3R5 266 aa7.76□□□□□ -1.17
ITGB1-201ENST00000302278 SMIM22K7EJ46 135 aa7.76□□□□□ -1.17
ITGB1-201ENST00000302278 RAB11FIP3O75154 756 aa7.76□□□□□ -1.17
ITGB1-201ENST00000302278 PARNO95453 639 aaKnown RBP7.76□□□□□ -1.17
ITGB1-201ENST00000302278 CXCL10P02778 98 aa7.76□□□□□ -1.17
ITGB1-201ENST00000302278 PURAQ00577 322 aaKnown RBP7.76□□□□□ -1.17
ITGB1-201ENST00000302278 TFF2Q03403 129 aa7.76□□□□□ -1.17
ITGB1-201ENST00000302278 LRRFIP1Q32MZ4 808 aaKnown RBP7.76□□□□□ -1.17
ITGB1-201ENST00000302278 PUS10Q3MIT2 529 aaKnown RBP7.76□□□□□ -1.17
ITGB1-201ENST00000302278 DUSP28Q4G0W2 176 aa7.76□□□□□ -1.17
ITGB1-201ENST00000302278 TMEM67Q5HYA8 995 aa7.76□□□□□ -1.17
ITGB1-201ENST00000302278 KIF1BPQ96EK5 621 aa7.76□□□□□ -1.17
ITGB1-201ENST00000302278 DDX11Q96FC9 970 aa7.76□□□□□ -1.17
ITGB1-201ENST00000302278 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.76□□□□□ -1.17
ITGB1-201ENST00000302278 A1CFQ9NQ94 594 aaKnown RBP7.76□□□□□ -1.17
ITGB1-201ENST00000302278 KIAA1671Q9BY89 1806 aa7.76□□□□□ -1.17
ITGB1-201ENST00000302278 APBB1O00213 710 aa7.76□□□□□ -1.17
ITGB1-201ENST00000302278 KPNA6O60684 536 aa7.76□□□□□ -1.17
ITGB1-201ENST00000302278 TTLL4Q14679 1199 aa7.76□□□□□ -1.17
ITGB1-201ENST00000302278 NKRFO15226 690 aaKnown RBP eCLIP7.76□□□□□ -1.17
ITGB1-201ENST00000302278 ACTN1P12814 892 aa7.76□□□□□ -1.17
ITGB1-201ENST00000302278 EDNRBP24530 442 aa7.76□□□□□ -1.17
ITGB1-201ENST00000302278 RABGGTBP53611 331 aa7.76□□□□□ -1.17
ITGB1-201ENST00000302278 CCDC85BQ15834 202 aaPredicted RBP7.76□□□□□ -1.17
ITGB1-201ENST00000302278 ZSCAN25Q6NSZ9 544 aa7.76□□□□□ -1.17
ITGB1-201ENST00000302278 HERC6Q8IVU3 1022 aa7.76□□□□□ -1.17
ITGB1-201ENST00000302278 KHSRPQ92945 711 aaKnown RBP eCLIP7.76□□□□□ -1.172e-6■■■□□ 15.6
ITGB1-201ENST00000302278 STRBPQ96SI9 672 aaKnown RBP7.76□□□□□ -1.17
ITGB1-201ENST00000302278 MTMR4Q9NYA4 1195 aa7.76□□□□□ -1.17
ITGB1-201ENST00000302278 C19orf67A6NJJ6 358 aa7.75□□□□□ -1.17
ITGB1-201ENST00000302278 GSG1L2A8MUP6 293 aa7.75□□□□□ -1.17
ITGB1-201ENST00000302278 GOLIM4O00461 696 aa7.75□□□□□ -1.17
ITGB1-201ENST00000302278 MYCNP04198 464 aaPredicted RBP7.75□□□□□ -1.17
ITGB1-201ENST00000302278 MYOGP15173 224 aa7.75□□□□□ -1.17
ITGB1-201ENST00000302278 GRB10Q13322 594 aa7.75□□□□□ -1.17
ITGB1-201ENST00000302278 PPP4R3BQ5MIZ7 849 aa7.75□□□□□ -1.17
ITGB1-201ENST00000302278 TRPV6Q9H1D0 765 aa7.75□□□□□ -1.17
ITGB1-201ENST00000302278 CYP39A1Q9NYL5 469 aa7.75□□□□□ -1.17
ITGB1-201ENST00000302278 TTC28Q96AY4 2481 aa7.75□□□□□ -1.17
ITGB1-201ENST00000302278 POTEB3A0JP26 581 aa7.75□□□□□ -1.17
ITGB1-201ENST00000302278 GTPBP6O43824 516 aaPredicted RBP7.75□□□□□ -1.17
ITGB1-201ENST00000302278 ARHGEF15O94989 841 aa7.75□□□□□ -1.17
ITGB1-201ENST00000302278 CA3P07451 260 aa7.75□□□□□ -1.17
ITGB1-201ENST00000302278 RLBP1P12271 317 aa7.75□□□□□ -1.17
ITGB1-201ENST00000302278 IGFBP4P22692 258 aa7.75□□□□□ -1.17
ITGB1-201ENST00000302278 POTEBQ6S5H4 581 aa7.75□□□□□ -1.17
ITGB1-201ENST00000302278 CXCL17Q6UXB2 119 aa7.75□□□□□ -1.17
ITGB1-201ENST00000302278 OTOP2Q7RTS6 562 aa7.75□□□□□ -1.17
ITGB1-201ENST00000302278 SP7Q8TDD2 431 aaPredicted RBP7.75□□□□□ -1.17
ITGB1-201ENST00000302278 STAG1Q8WVM7 1258 aa7.75□□□□□ -1.17
ITGB1-201ENST00000302278 CTAGE1Q96RT6 745 aa7.75□□□□□ -1.17
ITGB1-201ENST00000302278 CYP2D7A0A087X1C5 515 aa7.74□□□□□ -1.17
ITGB1-201ENST00000302278 IQCF3P0C7M6 154 aa7.74□□□□□ -1.17
ITGB1-201ENST00000302278 ERVK-21P61565 698 aa7.74□□□□□ -1.17
ITGB1-201ENST00000302278 BEX3Q00994 111 aa7.74□□□□□ -1.17
ITGB1-201ENST00000302278 GPNMBQ14956 572 aa7.74□□□□□ -1.17
ITGB1-201ENST00000302278 RCSD1Q6JBY9 416 aa7.74□□□□□ -1.17
ITGB1-201ENST00000302278 BTNL9Q6UXG8 535 aa7.74□□□□□ -1.17
ITGB1-201ENST00000302278 ANKRD35Q8N283 1001 aa7.74□□□□□ -1.17
ITGB1-201ENST00000302278 NEDD1Q8NHV4 660 aa7.74□□□□□ -1.17
ITGB1-201ENST00000302278 TTLL1O95922 423 aa7.74□□□□□ -1.17
ITGB1-201ENST00000302278 CPT1AP50416 773 aa7.74□□□□□ -1.17
ITGB1-201ENST00000302278 CNTN2Q02246 1040 aa7.74□□□□□ -1.17
ITGB1-201ENST00000302278 FAM178BQ8IXR5 827 aa7.74□□□□□ -1.17
ITGB1-201ENST00000302278 NUP88Q99567 741 aaPredicted RBP7.74□□□□□ -1.17
ITGB1-201ENST00000302278 AP5M1Q9H0R1 490 aa7.74□□□□□ -1.17
ITGB1-201ENST00000302278 RANBP17Q9H2T7 1088 aaKnown RBP7.74□□□□□ -1.17
ITGB1-201ENST00000302278 RAVER2Q9HCJ3 691 aaKnown RBP7.74□□□□□ -1.17
ITGB1-201ENST00000302278 A6NJR5 290 aa7.74□□□□□ -1.17
ITGB1-201ENST00000302278 GNAT2P19087 354 aa7.74□□□□□ -1.17
ITGB1-201ENST00000302278 CLASRPQ8N2M8 674 aaKnown RBP7.74□□□□□ -1.17
ITGB1-201ENST00000302278 CAGE1Q8TC20 777 aa7.74□□□□□ -1.17
ITGB1-201ENST00000302278 NEK9Q8TD19 979 aa7.74□□□□□ -1.17
ITGB1-201ENST00000302278 PPM1EQ8WY54 764 aa7.74□□□□□ -1.17
ITGB1-201ENST00000302278 DDRGK1Q96HY6 314 aa7.74□□□□□ -1.17
ITGB1-201ENST00000302278 MTG1Q9BT17 334 aaPredicted RBP7.74□□□□□ -1.17
ITGB1-201ENST00000302278 PUS7LQ9H0K6 701 aaKnown RBP7.74□□□□□ -1.17
ITGB1-201ENST00000302278 SLC4A4Q9Y6R1 1079 aa7.74□□□□□ -1.17
ITGB1-201ENST00000302278 BMP3P12645 472 aa7.73□□□□□ -1.17
ITGB1-201ENST00000302278 AFAP1L1Q8TED9 768 aa7.73□□□□□ -1.17
ITGB1-201ENST00000302278 C1orf115Q9H7X2 142 aa7.73□□□□□ -1.17
ITGB1-201ENST00000302278 ZNF287Q9HBT7 754 aa7.73□□□□□ -1.17
ITGB1-201ENST00000302278 PRKAG3Q9UGI9 489 aa7.73□□□□□ -1.17
ITGB1-201ENST00000302278 PNMA2Q9UL42 364 aa7.73□□□□□ -1.17
ITGB1-201ENST00000302278 EXOC6BQ9Y2D4 811 aa7.73□□□□□ -1.17
ITGB1-201ENST00000302278 TRIP12Q14669 1992 aaPredicted RBP7.73□□□□□ -1.17
ITGB1-201ENST00000302278 PLXNA3P51805 1871 aa7.73□□□□□ -1.17
ITGB1-201ENST00000302278 EFCAB14O75071 495 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms