RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 ACTN3Q08043 901 aaPredicted RBP12.11□□□□□ -0.47
ZNF558-201ENST00000301475 SPRED3Q2MJR0 410 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 PREPLQ4J6C6 727 aaPredicted RBP12.11□□□□□ -0.47
ZNF558-201ENST00000301475 RNF187Q5TA31 235 aaPredicted RBP12.11□□□□□ -0.47
ZNF558-201ENST00000301475 GPIHBP1Q8IV16 184 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 TRIM47Q96LD4 638 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 RMND1Q9NWS8 449 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.11□□□□□ -0.474e-6■□□□□ 11.2
ZNF558-201ENST00000301475 DCCP43146 1447 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 ERICH2A1L162 156 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 A6NNZ2 444 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 CSF1RP07333 972 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 GLI1P08151 1106 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 ELF1P32519 619 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 SMTNP53814 917 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 NEDD9Q14511 834 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 TUBB8Q3ZCM7 444 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 CCDC40Q4G0X9 1142 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 C8orf74Q6P047 294 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 LDHAL6AQ6ZMR3 332 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 CCT8L2Q96SF2 557 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 EXOC1Q9NV70 894 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 ZNHIT6Q9NWK9 470 aaKnown RBP12.11□□□□□ -0.47
ZNF558-201ENST00000301475 NFU1Q9UMS0 254 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 TRPM3Q9HCF6 1732 aaPredicted RBP12.11□□□□□ -0.47
ZNF558-201ENST00000301475 TACC1O75410 805 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 PCCAP05165 728 aaPredicted RBP12.11□□□□□ -0.47
ZNF558-201ENST00000301475 IFT88Q13099 833 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 TTI2Q6NXR4 508 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 NLRP14Q86W24 1093 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 LCORLQ8N3X6 602 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 GIMAP7Q8NHV1 300 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 TUBGCP2Q9BSJ2 902 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 IFIH1Q9BYX4 1025 aaKnown RBP12.11□□□□□ -0.47
ZNF558-201ENST00000301475 THAP9Q9H5L6 903 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 GREM2Q9H772 168 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 SLC40A1Q9NP59 571 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 SALL4Q9UJQ4 1053 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 HYOU1Q9Y4L1 999 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 V9GY48 417 aaPredicted RBP12.11□□□□□ -0.47
ZNF558-201ENST00000301475 TNKSO95271 1327 aa12.1□□□□□ -0.47
ZNF558-201ENST00000301475 CLGNO14967 610 aa12.1□□□□□ -0.47
ZNF558-201ENST00000301475 XBP1P17861 261 aa12.1□□□□□ -0.47
ZNF558-201ENST00000301475 IBSPP21815 317 aaPredicted RBP12.1□□□□□ -0.47
ZNF558-201ENST00000301475 ARID4AP29374 1257 aaPredicted RBP12.1□□□□□ -0.47
ZNF558-201ENST00000301475 MCM7P33993 719 aa12.1□□□□□ -0.47
ZNF558-201ENST00000301475 RCAN1P53805 252 aa12.1□□□□□ -0.47
ZNF558-201ENST00000301475 SEC23AQ15436 765 aa12.1□□□□□ -0.47
ZNF558-201ENST00000301475 NAALADL2Q58DX5 795 aa12.1□□□□□ -0.47
ZNF558-201ENST00000301475 MS4A14Q96JA4 679 aa12.1□□□□□ -0.47
ZNF558-201ENST00000301475 TSGA10Q9BZW7 698 aa12.1□□□□□ -0.47
ZNF558-201ENST00000301475 ARHGAP20Q9P2F6 1191 aa12.1□□□□□ -0.47
ZNF558-201ENST00000301475 DOCK2Q92608 1830 aa12.1□□□□□ -0.47
ZNF558-201ENST00000301475 PRLRP16471 622 aa12.1□□□□□ -0.47
ZNF558-201ENST00000301475 PPARDQ03181 441 aa12.1□□□□□ -0.47
ZNF558-201ENST00000301475 CFAP58Q5T655 872 aa12.1□□□□□ -0.47
ZNF558-201ENST00000301475 TYW1BQ6NUM6 668 aa12.1□□□□□ -0.47
ZNF558-201ENST00000301475 C6orf89Q6UWU4 347 aa12.1□□□□□ -0.47
ZNF558-201ENST00000301475 MICALCLQ6ZW33 695 aa12.1□□□□□ -0.47
ZNF558-201ENST00000301475 N4BP2L2Q92802 583 aaPredicted RBP12.1□□□□□ -0.47
ZNF558-201ENST00000301475 DUSP9Q99956 384 aaKnown RBP12.1□□□□□ -0.47
ZNF558-201ENST00000301475 KLRC4O43908 158 aa12.09□□□□□ -0.47
ZNF558-201ENST00000301475 TCP1P17987 556 aaKnown RBP12.09□□□□□ -0.47
ZNF558-201ENST00000301475 ITGA6P23229 1130 aa12.09□□□□□ -0.47
ZNF558-201ENST00000301475 RDXP35241 583 aaKnown RBP12.09□□□□□ -0.47
ZNF558-201ENST00000301475 TBC1D8BQ0IIM8 1120 aa12.09□□□□□ -0.47
ZNF558-201ENST00000301475 CCDC181Q5TID7 509 aa12.09□□□□□ -0.47
ZNF558-201ENST00000301475 EMC10Q5UCC4 262 aa12.09□□□□□ -0.47
ZNF558-201ENST00000301475 PIK3AP1Q6ZUJ8 805 aa12.09□□□□□ -0.47
ZNF558-201ENST00000301475 CCDC42Q96M95 316 aa12.09□□□□□ -0.47
ZNF558-201ENST00000301475 UBAC1Q9BSL1 405 aa12.09□□□□□ -0.47
ZNF558-201ENST00000301475 TLR10Q9BXR5 811 aa12.09□□□□□ -0.47
ZNF558-201ENST00000301475 CENPHQ9H3R5 247 aa12.09□□□□□ -0.47
ZNF558-201ENST00000301475 PCDHA13Q9Y5I0 950 aa12.09□□□□□ -0.47
ZNF558-201ENST00000301475 UBR2Q8IWV8 1755 aa12.09□□□□□ -0.47
ZNF558-201ENST00000301475 BCORQ6W2J9 1755 aa12.09□□□□□ -0.47
ZNF558-201ENST00000301475 CCDC189A1A4V9 331 aa12.09□□□□□ -0.47
ZNF558-201ENST00000301475 MDH1P40925 334 aaKnown RBP12.09□□□□□ -0.47
ZNF558-201ENST00000301475 GUCY2FP51841 1108 aa12.09□□□□□ -0.47
ZNF558-201ENST00000301475 EVA1CP58658 441 aa12.09□□□□□ -0.47
ZNF558-201ENST00000301475 SPA17Q15506 151 aa12.09□□□□□ -0.47
ZNF558-201ENST00000301475 CEP85LQ5SZL2 805 aa12.09□□□□□ -0.47
ZNF558-201ENST00000301475 WLSQ5T9L3 541 aa12.09□□□□□ -0.47
ZNF558-201ENST00000301475 FAM228AQ86W67 206 aa12.09□□□□□ -0.47
ZNF558-201ENST00000301475 TACO1Q9BSH4 297 aaKnown RBP12.09□□□□□ -0.47
ZNF558-201ENST00000301475 GDF3Q9NR23 364 aa12.09□□□□□ -0.47
ZNF558-201ENST00000301475 ZNF330Q9Y3S2 320 aaPredicted RBP12.09□□□□□ -0.47
ZNF558-201ENST00000301475 EPHB6O15197 1021 aa12.08□□□□□ -0.47
ZNF558-201ENST00000301475 FAM107AO95990 144 aa12.08□□□□□ -0.47
ZNF558-201ENST00000301475 PDHBP11177 359 aa12.08□□□□□ -0.47
ZNF558-201ENST00000301475 STAT6P42226 847 aa12.08□□□□□ -0.47
ZNF558-201ENST00000301475 KIF11P52732 1056 aa12.08□□□□□ -0.47
ZNF558-201ENST00000301475 CDK17Q00537 523 aa12.08□□□□□ -0.47
ZNF558-201ENST00000301475 PLCB4Q15147 1175 aa12.08□□□□□ -0.47
ZNF558-201ENST00000301475 MIIPQ5JXC2 388 aa12.08□□□□□ -0.47
ZNF558-201ENST00000301475 TMTC2Q8N394 836 aa12.08□□□□□ -0.47
ZNF558-201ENST00000301475 RETREG2Q8NC44 543 aa12.08□□□□□ -0.47
ZNF558-201ENST00000301475 LRRC15Q8TF66 581 aa12.08□□□□□ -0.47
ZNF558-201ENST00000301475 PCMTD1Q96MG8 357 aaPredicted RBP12.08□□□□□ -0.47
ZNF558-201ENST00000301475 PLA2G12BQ9BX93 195 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms