RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 TSC22D3Q99576 134 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 hCG_1984214I3L0E3 225 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 KRT10P13645 584 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 NOP14P78316 857 aaKnown RBP12.29□□□□□ -0.44
GCN1-201ENST00000300648 DHTKD1Q96HY7 919 aaPredicted RBP12.29□□□□□ -0.44
GCN1-201ENST00000300648 CCDC138Q96M89 665 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 FAM207AQ9NSI2 230 aaPredicted RBP12.29□□□□□ -0.44
GCN1-201ENST00000300648 GPC4O75487 556 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 ZMYM6O95789 1325 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 ATP10DQ9P241 1426 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.29□□□□□ -0.44
GCN1-201ENST00000300648 COL4A3BPQ9Y5P4 624 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 FAM83GA6ND36 823 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 GPAA1O43292 621 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 IGSF3O75054 1194 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 H2AFZP0C0S5 128 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 IFT88Q13099 833 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 KRT40Q6A162 431 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 H2AFVQ71UI9 128 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 TDRD7Q8NHU6 1098 aaKnown RBP12.29□□□□□ -0.44
GCN1-201ENST00000300648 ARHGAP10A1A4S6 786 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 HNRNPCL1O60812 293 aaKnown RBP12.29□□□□□ -0.44
GCN1-201ENST00000300648 TMC4Q7Z404 712 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 CABP7Q86V35 215 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 DZIP3Q86Y13 1208 aaKnown RBP12.29□□□□□ -0.44
GCN1-201ENST00000300648 TEX11Q8IYF3 940 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 TEX12Q9BXU0 123 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 IRS4O14654 1257 aaPredicted RBP12.29□□□□□ -0.44
GCN1-201ENST00000300648 MAPK13O15264 365 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 IRX5P78411 483 aaPredicted RBP12.29□□□□□ -0.44
GCN1-201ENST00000300648 C6orf118Q5T5N4 469 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 PIP4K2CQ8TBX8 421 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 ACTN1P12814 892 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 ZBTB12Q9Y330 459 aaPredicted RBP12.29□□□□□ -0.44
GCN1-201ENST00000300648 MAGI2Q86UL8 1455 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 MED23Q9ULK4 1368 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 ARHGEF9O43307 516 aa12.29□□□□□ -0.44
GCN1-201ENST00000300648 RNASE9P60153 205 aaKnown RBP12.29□□□□□ -0.44
GCN1-201ENST00000300648 DMP1Q13316 513 aaPredicted RBP12.29□□□□□ -0.44
GCN1-201ENST00000300648 SCHIP1Q9P0W5 487 aaPredicted RBP12.29□□□□□ -0.44
GCN1-201ENST00000300648 TMEM232C9JQI7 657 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 PPP1R12AO14974 1030 aaPredicted RBP12.28□□□□□ -0.44
GCN1-201ENST00000300648 SYF2O95926 243 aaKnown RBP12.28□□□□□ -0.44
GCN1-201ENST00000300648 SLC1A4P43007 532 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 CCT5P48643 541 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 CDR2Q01850 454 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 TEKT2Q9UIF3 430 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 BBS5Q8N3I7 341 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 PRPF38AQ8NAV1 312 aaKnown RBP12.28□□□□□ -0.44
GCN1-201ENST00000300648 KIF2CQ99661 725 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 METTL22Q9BUU2 404 aaPredicted RBP12.28□□□□□ -0.44
GCN1-201ENST00000300648 PYGLP06737 847 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 PCYT1AP49585 367 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 BFSP1Q12934 665 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 KLHL29Q96CT2 875 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 NUB1Q9Y5A7 615 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 DDAH1O94760 285 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 ATP1A2P50993 1020 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 TTLL7Q6ZT98 887 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 CATSPER1Q8NEC5 780 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 GIPC2Q8TF65 315 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.28□□□□□ -0.442e-8■■■■■ 81.4
GCN1-201ENST00000300648 IFNB1P01574 187 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 OCA2Q04671 838 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 TTC16Q8NEE8 873 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 MRPL46Q9H2W6 279 aaKnown RBP12.28□□□□□ -0.44
GCN1-201ENST00000300648 ZNF233A6NK53 670 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 ZBTB24O43167 697 aaPredicted RBP12.28□□□□□ -0.44
GCN1-201ENST00000300648 CAV1Q03135 178 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 CDC37Q16543 378 aaPredicted RBP12.28□□□□□ -0.44
GCN1-201ENST00000300648 C8orf58Q8NAV2 365 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 DONSONQ9NYP3 566 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 STOML1Q9UBI4 398 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 TTC37Q6PGP7 1564 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 CDC37L1Q7L3B6 337 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 U2AF1L4Q8WU68 220 aaKnown RBP12.28□□□□□ -0.44
GCN1-201ENST00000300648 PPP1R13BQ96KQ4 1090 aa12.28□□□□□ -0.44
GCN1-201ENST00000300648 PA2G4Q9UQ80 394 aaKnown RBP12.28□□□□□ -0.44
GCN1-201ENST00000300648 TNNC2P02585 160 aa12.27□□□□□ -0.44
GCN1-201ENST00000300648 SERPINB10P48595 397 aa12.27□□□□□ -0.44
GCN1-201ENST00000300648 IGBP1P78318 339 aa12.27□□□□□ -0.44
GCN1-201ENST00000300648 MAP3K10Q02779 954 aa12.27□□□□□ -0.44
GCN1-201ENST00000300648 DRP2Q13474 957 aa12.27□□□□□ -0.44
GCN1-201ENST00000300648 PSMD7P51665 324 aa12.27□□□□□ -0.44
GCN1-201ENST00000300648 GNPTABQ3T906 1256 aa12.27□□□□□ -0.44
GCN1-201ENST00000300648 KLC3Q6P597 504 aa12.27□□□□□ -0.44
GCN1-201ENST00000300648 POLR3CQ9BUI4 534 aaPredicted RBP12.27□□□□□ -0.44
GCN1-201ENST00000300648 ANAPC5Q9UJX4 755 aa12.27□□□□□ -0.44
GCN1-201ENST00000300648 USTQ9Y2C2 406 aa12.27□□□□□ -0.44
GCN1-201ENST00000300648 ZBTB7BO15156 539 aaPredicted RBP12.27□□□□□ -0.45
GCN1-201ENST00000300648 CD19P15391 556 aa12.27□□□□□ -0.45
GCN1-201ENST00000300648 HDAC4P56524 1084 aa12.27□□□□□ -0.45
GCN1-201ENST00000300648 N4BP2L2Q92802 583 aaPredicted RBP12.27□□□□□ -0.45
GCN1-201ENST00000300648 MRRFQ96E11 262 aaKnown RBP12.27□□□□□ -0.45
GCN1-201ENST00000300648 POLE3Q9NRF9 147 aa12.27□□□□□ -0.45
GCN1-201ENST00000300648 CTNND1O60716 968 aaKnown RBP12.27□□□□□ -0.45
GCN1-201ENST00000300648 TNNI1P19237 187 aa12.27□□□□□ -0.45
GCN1-201ENST00000300648 EIF4A2Q14240 407 aaKnown RBP12.27□□□□□ -0.45
GCN1-201ENST00000300648 NLRX1Q86UT6 975 aa12.27□□□□□ -0.45
GCN1-201ENST00000300648 CHUKO15111 745 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms