RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 CHMP4BP1P59074 171 aa22.57■■□□□ 1.2
HPS6-201ENST00000299238 RBL2Q08999 1139 aa22.57■■□□□ 1.2
HPS6-201ENST00000299238 CASP8Q14790 479 aa22.57■■□□□ 1.2
HPS6-201ENST00000299238 MAPKAPK5Q8IW41 473 aa22.57■■□□□ 1.2
HPS6-201ENST00000299238 SEPT12Q8IYM1 358 aa22.57■■□□□ 1.2
HPS6-201ENST00000299238 ANKS1AQ92625 1134 aa22.57■■□□□ 1.2
HPS6-201ENST00000299238 PANX2Q96RD6 677 aa22.57■■□□□ 1.2
HPS6-201ENST00000299238 MTMR7Q9Y216 660 aa22.57■■□□□ 1.2
HPS6-201ENST00000299238 CCT6AP40227 531 aaKnown RBP22.57■■□□□ 1.2
HPS6-201ENST00000299238 GRM4Q14833 912 aa22.57■■□□□ 1.2
HPS6-201ENST00000299238 STAG2Q8N3U4 1231 aa22.57■■□□□ 1.2
HPS6-201ENST00000299238 C4orf32Q8N8J7 132 aa22.57■■□□□ 1.2
HPS6-201ENST00000299238 IGSF22Q8N9C0 903 aa22.57■■□□□ 1.2
HPS6-201ENST00000299238 CD209Q9NNX6 404 aa22.57■■□□□ 1.2
HPS6-201ENST00000299238 SAP30BPQ9UHR5 308 aaKnown RBP22.57■■□□□ 1.2
HPS6-201ENST00000299238 CTNND2Q9UQB3 1225 aa22.57■■□□□ 1.2
HPS6-201ENST00000299238 AKR1B15C9JRZ8 316 aaPredicted RBP22.56■■□□□ 1.2
HPS6-201ENST00000299238 TSPY3P0CV98 308 aa22.56■■□□□ 1.2
HPS6-201ENST00000299238 TSPY8P0CW00 308 aa22.56■■□□□ 1.2
HPS6-201ENST00000299238 HSP90B2PQ58FF3 399 aa22.56■■□□□ 1.2
HPS6-201ENST00000299238 LRCH2Q5VUJ6 765 aa22.56■■□□□ 1.2
HPS6-201ENST00000299238 HNRNPLLQ8WVV9 542 aaKnown RBP22.56■■□□□ 1.2
HPS6-201ENST00000299238 GPKOWQ92917 476 aaPredicted RBP eCLIP22.56■■□□□ 1.2
HPS6-201ENST00000299238 RABEP2Q9H5N1 569 aa22.56■■□□□ 1.2
HPS6-201ENST00000299238 LZTFL1Q9NQ48 299 aa22.56■■□□□ 1.2
HPS6-201ENST00000299238 FAM205AQ6ZU69 1335 aa22.56■■□□□ 1.2
HPS6-201ENST00000299238 SERPINB2P05120 415 aa22.56■■□□□ 1.2
HPS6-201ENST00000299238 BTDP43251 543 aa22.56■■□□□ 1.2
HPS6-201ENST00000299238 RASGRP4Q8TDF6 673 aa22.56■■□□□ 1.2
HPS6-201ENST00000299238 MAPK8IP1Q9UQF2 711 aa22.56■■□□□ 1.2
HPS6-201ENST00000299238 ATP2B4P23634 1241 aa22.55■■□□□ 1.2
HPS6-201ENST00000299238 FAM71BQ8TC56 605 aa22.55■■□□□ 1.2
HPS6-201ENST00000299238 GGA1Q9UJY5 639 aa22.55■■□□□ 1.2
HPS6-201ENST00000299238 LRRIQ3A6PVS8 624 aaPredicted RBP22.55■■□□□ 1.2
HPS6-201ENST00000299238 ONECUT3O60422 494 aaPredicted RBP22.55■■□□□ 1.2
HPS6-201ENST00000299238 RHOXF2BP0C7M4 288 aa22.55■■□□□ 1.2
HPS6-201ENST00000299238 CALML3P27482 149 aa22.55■■□□□ 1.2
HPS6-201ENST00000299238 BLIDQ8IZY5 108 aa22.55■■□□□ 1.2
HPS6-201ENST00000299238 CCDC12Q8WUD4 166 aaPredicted RBP22.55■■□□□ 1.2
HPS6-201ENST00000299238 CTAGE1Q96RT6 745 aa22.55■■□□□ 1.2
HPS6-201ENST00000299238 RHOXF2Q9BQY4 288 aa22.55■■□□□ 1.2
HPS6-201ENST00000299238 MAD2L2Q9UI95 211 aa22.55■■□□□ 1.2
HPS6-201ENST00000299238 CCT5P48643 541 aa22.54■■□□□ 1.2
HPS6-201ENST00000299238 VSNL1P62760 191 aa22.54■■□□□ 1.2
HPS6-201ENST00000299238 CCDC178Q5BJE1 867 aa22.54■■□□□ 1.2
HPS6-201ENST00000299238 ARL6IP4Q66PJ3 421 aaKnown RBP22.54■■□□□ 1.2
HPS6-201ENST00000299238 RAD9BQ6WBX8 426 aa22.54■■□□□ 1.2
HPS6-201ENST00000299238 RBM17Q96I25 401 aaKnown RBP22.54■■□□□ 1.2
HPS6-201ENST00000299238 SNED1Q8TER0 1413 aa22.54■■□□□ 1.2
HPS6-201ENST00000299238 GTPBP6O43824 516 aaPredicted RBP22.54■■□□□ 1.2
HPS6-201ENST00000299238 IL1R1P14778 569 aa22.54■■□□□ 1.2
HPS6-201ENST00000299238 ZNF444Q8N0Y2 327 aaPredicted RBP22.54■■□□□ 1.2
HPS6-201ENST00000299238 SH3GLB2Q9NR46 395 aa22.54■■□□□ 1.2
HPS6-201ENST00000299238 TCP11L1Q9NUJ3 509 aa22.54■■□□□ 1.2
HPS6-201ENST00000299238 MYH1P12882 1939 aa22.53■■□□□ 1.2
HPS6-201ENST00000299238 IRF6O14896 467 aa22.53■■□□□ 1.2
HPS6-201ENST00000299238 RASA1P20936 1047 aa22.53■■□□□ 1.2
HPS6-201ENST00000299238 SLC35G1Q2M3R5 365 aa22.53■■□□□ 1.2
HPS6-201ENST00000299238 TYW1BQ6NUM6 668 aa22.53■■□□□ 1.2
HPS6-201ENST00000299238 PYM1Q9BRP8 204 aaKnown RBP22.53■■□□□ 1.2
HPS6-201ENST00000299238 M0R2N6 131 aa22.53■■□□□ 1.2
HPS6-201ENST00000299238 RNF40O75150 1001 aa22.53■■□□□ 1.2
HPS6-201ENST00000299238 ECM2O94769 699 aaPredicted RBP22.53■■□□□ 1.2
HPS6-201ENST00000299238 CASP14P31944 242 aa22.53■■□□□ 1.2
HPS6-201ENST00000299238 MAP9Q49MG5 647 aa22.53■■□□□ 1.2
HPS6-201ENST00000299238 PCDHA4Q9UN74 947 aa22.53■■□□□ 1.2
HPS6-201ENST00000299238 GNAQP50148 359 aa22.52■■□□□ 1.2
HPS6-201ENST00000299238 RRAGBQ5VZM2 374 aa22.52■■□□□ 1.2
HPS6-201ENST00000299238 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.52■■□□□ 1.2
HPS6-201ENST00000299238 PPFIBP1Q86W92 1011 aa22.52■■□□□ 1.2
HPS6-201ENST00000299238 RAB21Q9UL25 225 aa22.52■■□□□ 1.2
HPS6-201ENST00000299238 STX8Q9UNK0 236 aa22.52■■□□□ 1.2
HPS6-201ENST00000299238 FAM169AQ9Y6X4 670 aa22.52■■□□□ 1.2
HPS6-201ENST00000299238 LTBP1Q14766 1721 aa22.52■■□□□ 1.2
HPS6-201ENST00000299238 LONP1P36776 959 aaKnown RBP22.52■■□□□ 1.2
HPS6-201ENST00000299238 TEX11Q8IYF3 940 aa22.52■■□□□ 1.2
HPS6-201ENST00000299238 LRRC37AA6NMS7 1700 aa22.52■■□□□ 1.2
HPS6-201ENST00000299238 GPR75-ASB3A0A0A6YYF3 556 aa22.51■■□□□ 1.19
HPS6-201ENST00000299238 MFAP3LO75121 409 aa22.51■■□□□ 1.19
HPS6-201ENST00000299238 SRGAP1Q7Z6B7 1085 aa22.51■■□□□ 1.19
HPS6-201ENST00000299238 TMEM47Q9BQJ4 181 aa22.51■■□□□ 1.19
HPS6-201ENST00000299238 LIMA1Q9UHB6 759 aaKnown RBP22.51■■□□□ 1.19
HPS6-201ENST00000299238 RWDD2AQ9UIY3 292 aa22.51■■□□□ 1.19
HPS6-201ENST00000299238 FOCADQ5VW36 1801 aa22.51■■□□□ 1.19
HPS6-201ENST00000299238 LRRC10BA6NIK2 292 aa22.51■■□□□ 1.19
HPS6-201ENST00000299238 FXR1P51114 621 aaKnown RBP eCLIP22.51■■□□□ 1.19
HPS6-201ENST00000299238 GBP6Q6ZN66 633 aa22.51■■□□□ 1.19
HPS6-201ENST00000299238 RIN2Q8WYP3 895 aaPredicted RBP22.51■■□□□ 1.19
HPS6-201ENST00000299238 NAA15Q9BXJ9 866 aaKnown RBP22.51■■□□□ 1.19
HPS6-201ENST00000299238 EHD4Q9H223 541 aa22.51■■□□□ 1.19
HPS6-201ENST00000299238 VPS16Q9H269 839 aa22.51■■□□□ 1.19
HPS6-201ENST00000299238 ADGRG1Q9Y653 693 aa22.51■■□□□ 1.19
HPS6-201ENST00000299238 CYTH3O43739 400 aa22.5■■□□□ 1.19
HPS6-201ENST00000299238 GYPCP04921 128 aa22.5■■□□□ 1.19
HPS6-201ENST00000299238 KRT31Q15323 416 aa22.5■■□□□ 1.19
HPS6-201ENST00000299238 FILIP1LQ4L180 1135 aa22.5■■□□□ 1.19
HPS6-201ENST00000299238 TRPC5Q9UL62 973 aaPredicted RBP22.5■■□□□ 1.19
HPS6-201ENST00000299238 FLT1P17948 1338 aa22.5■■□□□ 1.19
HPS6-201ENST00000299238 ITIH6Q6UXX5 1313 aa22.5■■□□□ 1.19
HPS6-201ENST00000299238 CCDC175P0C221 793 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms