RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 UBLCP1Q8WVY7 318 aaPredicted RBP16.53■□□□□ 0.24
SPIDR-201ENST00000297423 NYXQ9GZU5 481 aa16.53■□□□□ 0.24
SPIDR-201ENST00000297423 PAPPAQ13219 1627 aa16.52■□□□□ 0.24
SPIDR-201ENST00000297423 PIK3AP1Q6ZUJ8 805 aa16.52■□□□□ 0.24
SPIDR-201ENST00000297423 KRT27Q7Z3Y8 459 aa16.52■□□□□ 0.24
SPIDR-201ENST00000297423 IFIH1Q9BYX4 1025 aaKnown RBP16.52■□□□□ 0.24
SPIDR-201ENST00000297423 KLC4Q9NSK0 619 aa16.52■□□□□ 0.24
SPIDR-201ENST00000297423 PDE2AO00408 941 aaPredicted RBP16.52■□□□□ 0.23
SPIDR-201ENST00000297423 CLTAP09496 248 aa16.52■□□□□ 0.23
SPIDR-201ENST00000297423 KLK7P49862 253 aa16.52■□□□□ 0.23
SPIDR-201ENST00000297423 CUL4BQ13620 913 aa16.52■□□□□ 0.23
SPIDR-201ENST00000297423 FAM196AQ6ZSG2 479 aa16.52■□□□□ 0.23
SPIDR-201ENST00000297423 SUGP1Q8IWZ8 645 aaKnown RBP16.52■□□□□ 0.23
SPIDR-201ENST00000297423 AGPAT5Q9NUQ2 364 aa16.52■□□□□ 0.23
SPIDR-201ENST00000297423 NRAPQ86VF7 1730 aa16.52■□□□□ 0.23
SPIDR-201ENST00000297423 PDHBP11177 359 aa16.52■□□□□ 0.23
SPIDR-201ENST00000297423 PAX7P23759 505 aa16.52■□□□□ 0.23
SPIDR-201ENST00000297423 PPP1R7Q15435 360 aa16.52■□□□□ 0.23
SPIDR-201ENST00000297423 TCP11Q8WWU5 503 aa16.52■□□□□ 0.23
SPIDR-201ENST00000297423 CCDC51Q96ER9 411 aa16.52■□□□□ 0.23
SPIDR-201ENST00000297423 MS4A14Q96JA4 679 aa16.52■□□□□ 0.23
SPIDR-201ENST00000297423 CHUKO15111 745 aa16.51■□□□□ 0.23
SPIDR-201ENST00000297423 MBD4O95243 580 aa16.51■□□□□ 0.23
SPIDR-201ENST00000297423 PARP1P09874 1014 aaKnown RBP16.51■□□□□ 0.23
SPIDR-201ENST00000297423 TPTE2Q6XPS3 522 aa16.51■□□□□ 0.23
SPIDR-201ENST00000297423 MED15Q96RN5 788 aa16.51■□□□□ 0.23
SPIDR-201ENST00000297423 ZSWIM5Q9P217 1185 aa16.51■□□□□ 0.23
SPIDR-201ENST00000297423 SRP68Q9UHB9 627 aaKnown RBP16.51■□□□□ 0.23
SPIDR-201ENST00000297423 ZNF532Q9HCE3 1301 aa16.51■□□□□ 0.23
SPIDR-201ENST00000297423 MEFVO15553 781 aaPredicted RBP16.51■□□□□ 0.23
SPIDR-201ENST00000297423 ELF1P32519 619 aa16.51■□□□□ 0.23
SPIDR-201ENST00000297423 HDLBPQ00341 1268 aaKnown RBP16.51■□□□□ 0.23
SPIDR-201ENST00000297423 CSGALNACT2Q8N6G5 542 aa16.51■□□□□ 0.23
SPIDR-201ENST00000297423 PRPF38AQ8NAV1 312 aaKnown RBP16.51■□□□□ 0.23
SPIDR-201ENST00000297423 NLRP3Q96P20 1036 aa16.51■□□□□ 0.23
SPIDR-201ENST00000297423 MAP3K14Q99558 947 aa16.51■□□□□ 0.23
SPIDR-201ENST00000297423 FBXO2Q9UK22 296 aaPredicted RBP16.51■□□□□ 0.23
SPIDR-201ENST00000297423 GLI3P10071 1580 aa16.51■□□□□ 0.23
SPIDR-201ENST00000297423 CNTNAP4Q9C0A0 1308 aa16.51■□□□□ 0.23
SPIDR-201ENST00000297423 ZSCAN5CA6NGD5 496 aaPredicted RBP16.51■□□□□ 0.23
SPIDR-201ENST00000297423 TMCO5BA8MYB1 307 aa16.51■□□□□ 0.23
SPIDR-201ENST00000297423 KIF4AO95239 1232 aa16.51■□□□□ 0.23
SPIDR-201ENST00000297423 ZFYP08048 801 aaPredicted RBP16.51■□□□□ 0.23
SPIDR-201ENST00000297423 RC3H1Q5TC82 1133 aaKnown RBP16.51■□□□□ 0.23
SPIDR-201ENST00000297423 KCNV1Q6PIU1 500 aa16.51■□□□□ 0.23
SPIDR-201ENST00000297423 MICAL1Q8TDZ2 1067 aa16.51■□□□□ 0.23
SPIDR-201ENST00000297423 RNPC3Q96LT9 517 aaKnown RBP16.51■□□□□ 0.23
SPIDR-201ENST00000297423 PTGDRQ13258 359 aa16.5■□□□□ 0.23
SPIDR-201ENST00000297423 MAGEB6Q8N7X4 407 aa16.5■□□□□ 0.23
SPIDR-201ENST00000297423 TRIML1Q8N9V2 468 aa16.5■□□□□ 0.23
SPIDR-201ENST00000297423 MROH5Q6ZUA9 1318 aa16.5■□□□□ 0.23
SPIDR-201ENST00000297423 A0A1B0GUA9 196 aa16.5■□□□□ 0.23
SPIDR-201ENST00000297423 SH2B2O14492 632 aaPredicted RBP16.5■□□□□ 0.23
SPIDR-201ENST00000297423 BUB1BO60566 1050 aaPredicted RBP16.5■□□□□ 0.23
SPIDR-201ENST00000297423 PDE8BO95263 885 aa16.5■□□□□ 0.23
SPIDR-201ENST00000297423 NR1D1P20393 614 aa16.5■□□□□ 0.23
SPIDR-201ENST00000297423 CDC25CP30307 473 aa16.5■□□□□ 0.23
SPIDR-201ENST00000297423 SNCBQ16143 134 aa16.5■□□□□ 0.23
SPIDR-201ENST00000297423 KSR1Q8IVT5 923 aa16.5■□□□□ 0.23
SPIDR-201ENST00000297423 CCDC47Q96A33 483 aaKnown RBP16.5■□□□□ 0.23
SPIDR-201ENST00000297423 NOC4LQ9BVI4 516 aaKnown RBP16.5■□□□□ 0.23
SPIDR-201ENST00000297423 NLRC4Q9NPP4 1024 aa16.5■□□□□ 0.23
SPIDR-201ENST00000297423 HAUS2Q9NVX0 235 aa16.5■□□□□ 0.23
SPIDR-201ENST00000297423 SNAP23O00161 211 aa16.5■□□□□ 0.23
SPIDR-201ENST00000297423 TRIM37O94972 964 aa16.5■□□□□ 0.23
SPIDR-201ENST00000297423 MMP1P03956 469 aa16.5■□□□□ 0.23
SPIDR-201ENST00000297423 UBA7P41226 1012 aa16.5■□□□□ 0.23
SPIDR-201ENST00000297423 TOB1P50616 345 aaPredicted RBP16.5■□□□□ 0.23
SPIDR-201ENST00000297423 PUM3Q15397 648 aaKnown RBP16.5■□□□□ 0.23
SPIDR-201ENST00000297423 KRT12Q99456 494 aa16.5■□□□□ 0.23
SPIDR-201ENST00000297423 SELENOSQ9BQE4 189 aa16.5■□□□□ 0.23
SPIDR-201ENST00000297423 NHEJ1Q9H9Q4 299 aaPredicted RBP16.5■□□□□ 0.23
SPIDR-201ENST00000297423 DONSONQ9NYP3 566 aa16.5■□□□□ 0.23
SPIDR-201ENST00000297423 LRP2BPQ9P2M1 347 aa16.5■□□□□ 0.23
SPIDR-201ENST00000297423 NARFQ9UHQ1 456 aa16.5■□□□□ 0.23
SPIDR-201ENST00000297423 RPS6KA5O75582 802 aa16.49■□□□□ 0.23
SPIDR-201ENST00000297423 BIRC2Q13490 618 aa16.49■□□□□ 0.23
SPIDR-201ENST00000297423 ERFEQ4G0M1 354 aa16.49■□□□□ 0.23
SPIDR-201ENST00000297423 TCP11X2Q5H9J9 407 aa16.49■□□□□ 0.23
SPIDR-201ENST00000297423 OR2W6PQ8NHA6 318 aa16.49■□□□□ 0.23
SPIDR-201ENST00000297423 HEXIM1O94992 359 aaKnown RBP16.49■□□□□ 0.23
SPIDR-201ENST00000297423 MAGEA1P43355 309 aa16.49■□□□□ 0.23
SPIDR-201ENST00000297423 SARNPP82979 210 aaKnown RBP16.49■□□□□ 0.23
SPIDR-201ENST00000297423 NAIF1Q69YI7 327 aaPredicted RBP16.49■□□□□ 0.23
SPIDR-201ENST00000297423 WDR93Q6P2C0 686 aa16.49■□□□□ 0.23
SPIDR-201ENST00000297423 TSEN2Q8NCE0 465 aaKnown RBP16.49■□□□□ 0.23
SPIDR-201ENST00000297423 UHMK1Q8TAS1 419 aaKnown RBP16.49■□□□□ 0.23
SPIDR-201ENST00000297423 THOC1Q96FV9 657 aaKnown RBP16.49■□□□□ 0.23
SPIDR-201ENST00000297423 PRKAB2O43741 272 aa16.49■□□□□ 0.23
SPIDR-201ENST00000297423 UQCRFS1P1P0C7P4 283 aa16.49■□□□□ 0.23
SPIDR-201ENST00000297423 AMOTL1Q8IY63 956 aa16.49■□□□□ 0.23
SPIDR-201ENST00000297423 NKX2-3Q8TAU0 364 aa16.49■□□□□ 0.23
SPIDR-201ENST00000297423 TAF4BQ92750 862 aa16.49■□□□□ 0.23
SPIDR-201ENST00000297423 ZIM3Q96PE6 472 aa16.49■□□□□ 0.23
SPIDR-201ENST00000297423 MYO1AQ9UBC5 1043 aa16.49■□□□□ 0.23
SPIDR-201ENST00000297423 PACSIN2Q9UNF0 486 aaPredicted RBP16.49■□□□□ 0.23
SPIDR-201ENST00000297423 PSMA7O14818 248 aa16.48■□□□□ 0.23
SPIDR-201ENST00000297423 PRPF6O94906 941 aaKnown RBP16.48■□□□□ 0.23
SPIDR-201ENST00000297423 HIBCHQ6NVY1 386 aaPredicted RBP16.48■□□□□ 0.23
SPIDR-201ENST00000297423 TMC4Q7Z404 712 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms