RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 FBXO11Q86XK2 927 aa17.67■□□□□ 0.42
LSM6-201ENST00000296581 FAM200AQ8TCP9 573 aa17.67■□□□□ 0.42
LSM6-201ENST00000296581 CHURC1Q8WUH1 139 aa17.67■□□□□ 0.42
LSM6-201ENST00000296581 ADARB2Q9NS39 739 aaKnown RBP17.67■□□□□ 0.42
LSM6-201ENST00000296581 OFD1O75665 1012 aa17.66■□□□□ 0.42
LSM6-201ENST00000296581 LMOD1P29536 600 aaPredicted RBP17.66■□□□□ 0.42
LSM6-201ENST00000296581 STX1AQ16623 288 aa17.66■□□□□ 0.42
LSM6-201ENST00000296581 ANO6Q4KMQ2 910 aa17.66■□□□□ 0.42
LSM6-201ENST00000296581 FAM160B2Q86V87 743 aa17.66■□□□□ 0.42
LSM6-201ENST00000296581 SYMPKQ92797 1274 aaKnown RBP17.66■□□□□ 0.42
LSM6-201ENST00000296581 KIAA1683Q9H0B3 1180 aa17.66■□□□□ 0.42
LSM6-201ENST00000296581 TMEM60Q9H2L4 133 aa17.66■□□□□ 0.42
LSM6-201ENST00000296581 INPP5BP32019 993 aa17.65■□□□□ 0.42
LSM6-201ENST00000296581 LONP1P36776 959 aaKnown RBP17.65■□□□□ 0.42
LSM6-201ENST00000296581 SNAP25P60880 206 aa17.65■□□□□ 0.42
LSM6-201ENST00000296581 ZYXQ15942 572 aaKnown RBP17.65■□□□□ 0.42
LSM6-201ENST00000296581 UBE2SQ16763 222 aa17.65■□□□□ 0.42
LSM6-201ENST00000296581 LETM2Q2VYF4 491 aa17.65■□□□□ 0.42
LSM6-201ENST00000296581 EPSTI1Q96J88 318 aa17.65■□□□□ 0.42
LSM6-201ENST00000296581 FEM1BQ9UK73 627 aa17.65■□□□□ 0.42
LSM6-201ENST00000296581 SSC5DA1L4H1 1573 aa17.65■□□□□ 0.42
LSM6-201ENST00000296581 POLR2DO15514 142 aaKnown RBP17.65■□□□□ 0.42
LSM6-201ENST00000296581 EDIL3O43854 480 aa17.65■□□□□ 0.42
LSM6-201ENST00000296581 SCYL3Q8IZE3 742 aa17.65■□□□□ 0.42
LSM6-201ENST00000296581 CNNM3Q8NE01 707 aa17.65■□□□□ 0.42
LSM6-201ENST00000296581 ANP32BQ92688 251 aaKnown RBP17.65■□□□□ 0.42
LSM6-201ENST00000296581 FEZ1Q99689 392 aa17.65■□□□□ 0.42
LSM6-201ENST00000296581 RANBP17Q9H2T7 1088 aaKnown RBP17.65■□□□□ 0.42
LSM6-201ENST00000296581 TUBE1Q9UJT0 475 aa17.65■□□□□ 0.42
LSM6-201ENST00000296581 MYH7BA7E2Y1 1941 aa17.65■□□□□ 0.42
LSM6-201ENST00000296581 CCNT1O60563 726 aaKnown RBP17.64■□□□□ 0.41
LSM6-201ENST00000296581 TRAF1Q13077 416 aa17.64■□□□□ 0.41
LSM6-201ENST00000296581 LPAR1Q92633 364 aa17.64■□□□□ 0.41
LSM6-201ENST00000296581 ERCC4Q92889 916 aaPredicted RBP17.64■□□□□ 0.41
LSM6-201ENST00000296581 ACTN4O43707 911 aaKnown RBP17.64■□□□□ 0.41
LSM6-201ENST00000296581 MDM2Q00987 491 aaPredicted RBP17.64■□□□□ 0.41
LSM6-201ENST00000296581 DTHD1Q6ZMT9 781 aa17.64■□□□□ 0.41
LSM6-201ENST00000296581 TEX2Q8IWB9 1127 aa17.64■□□□□ 0.41
LSM6-201ENST00000296581 PPP1R9BQ96SB3 815 aa17.64■□□□□ 0.41
LSM6-201ENST00000296581 ANO10Q9NW15 660 aa17.64■□□□□ 0.41
LSM6-201ENST00000296581 A0A087X0B3 334 aa17.63■□□□□ 0.41
LSM6-201ENST00000296581 WDR46O15213 610 aaKnown RBP17.63■□□□□ 0.41
LSM6-201ENST00000296581 NEMFO60524 1076 aa17.63■□□□□ 0.41
LSM6-201ENST00000296581 OR52Z1P0C646 297 aa17.63■□□□□ 0.41
LSM6-201ENST00000296581 DMTNQ08495 405 aa17.63■□□□□ 0.41
LSM6-201ENST00000296581 CCDC173Q0VFZ6 552 aa17.63■□□□□ 0.41
LSM6-201ENST00000296581 PRAMEF18Q5VWM3 479 aa17.63■□□□□ 0.41
LSM6-201ENST00000296581 MCTP2Q6DN12 878 aa17.63■□□□□ 0.41
LSM6-201ENST00000296581 WDR18Q9BV38 432 aa17.63■□□□□ 0.41
LSM6-201ENST00000296581 DNAJC25Q9H1X3 360 aa17.63■□□□□ 0.41
LSM6-201ENST00000296581 SERTAD1Q9UHV2 236 aa17.63■□□□□ 0.41
LSM6-201ENST00000296581 PHIPQ8WWQ0 1821 aa17.63■□□□□ 0.41
LSM6-201ENST00000296581 MEIS2O14770 477 aa17.63■□□□□ 0.41
LSM6-201ENST00000296581 AP3B2Q13367 1082 aa17.63■□□□□ 0.41
LSM6-201ENST00000296581 KANK3Q6NY19 840 aa17.63■□□□□ 0.41
LSM6-201ENST00000296581 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.63■□□□□ 0.41
LSM6-201ENST00000296581 CBX8Q9HC52 389 aa17.63■□□□□ 0.41
LSM6-201ENST00000296581 USP25Q9UHP3 1055 aa17.63■□□□□ 0.41
LSM6-201ENST00000296581 USP17L15C9J2P7 530 aa17.62■□□□□ 0.41
LSM6-201ENST00000296581 USP17L13C9JLJ4 530 aa17.62■□□□□ 0.41
LSM6-201ENST00000296581 USP17L11C9JVI0 530 aa17.62■□□□□ 0.41
LSM6-201ENST00000296581 USP17L18D6R9N7 530 aa17.62■□□□□ 0.41
LSM6-201ENST00000296581 USP17L22D6RA61 530 aa17.62■□□□□ 0.41
LSM6-201ENST00000296581 USP17L17D6RBQ6 530 aa17.62■□□□□ 0.41
LSM6-201ENST00000296581 USP17L19D6RCP7 530 aa17.62■□□□□ 0.41
LSM6-201ENST00000296581 USP17L20D6RJB6 530 aa17.62■□□□□ 0.41
LSM6-201ENST00000296581 USP17L24Q0WX57 530 aa17.62■□□□□ 0.41
LSM6-201ENST00000296581 SUPT20HL1Q3ZLR7 823 aa17.62■□□□□ 0.41
LSM6-201ENST00000296581 PPP4R3AQ6IN85 833 aa17.62■□□□□ 0.41
LSM6-201ENST00000296581 USP17L6PQ6QN14 398 aa17.62■□□□□ 0.41
LSM6-201ENST00000296581 PDILTQ8N807 584 aa17.62■□□□□ 0.41
LSM6-201ENST00000296581 L3MBTL3Q96JM7 780 aaPredicted RBP17.62■□□□□ 0.41
LSM6-201ENST00000296581 WRNIP1Q96S55 665 aa17.62■□□□□ 0.41
LSM6-201ENST00000296581 HOOK1Q9UJC3 728 aaKnown RBP17.62■□□□□ 0.41
LSM6-201ENST00000296581 SMCHD1A6NHR9 2005 aa17.62■□□□□ 0.41
LSM6-201ENST00000296581 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.61■□□□□ 0.41
LSM6-201ENST00000296581 OPLAHO14841 1288 aa17.61■□□□□ 0.41
LSM6-201ENST00000296581 ZNF165P49910 485 aa17.61■□□□□ 0.41
LSM6-201ENST00000296581 USH1GQ495M9 461 aa17.61■□□□□ 0.41
LSM6-201ENST00000296581 C11orf57Q6ZUT1 292 aaPredicted RBP17.61■□□□□ 0.41
LSM6-201ENST00000296581 KIFC2Q96AC6 838 aa17.61■□□□□ 0.41
LSM6-201ENST00000296581 KLRG1Q96E93 195 aa17.61■□□□□ 0.41
LSM6-201ENST00000296581 PDLIM2Q96JY6 352 aa17.61■□□□□ 0.41
LSM6-201ENST00000296581 PYM1Q9BRP8 204 aaKnown RBP17.61■□□□□ 0.41
LSM6-201ENST00000296581 PNOCQ13519 176 aa17.61■□□□□ 0.41
LSM6-201ENST00000296581 NOL9Q5SY16 702 aaKnown RBP17.61■□□□□ 0.41
LSM6-201ENST00000296581 MTERF4Q7Z6M4 381 aaKnown RBP17.61■□□□□ 0.41
LSM6-201ENST00000296581 MTMR9Q96QG7 549 aa17.61■□□□□ 0.41
LSM6-201ENST00000296581 AS3MTQ9HBK9 375 aa17.61■□□□□ 0.41
LSM6-201ENST00000296581 PRDM10Q9NQV6 1147 aa17.61■□□□□ 0.41
LSM6-201ENST00000296581 FBXO28Q9NVF7 368 aa17.61■□□□□ 0.41
LSM6-201ENST00000296581 SLFN14P0C7P3 912 aa17.6■□□□□ 0.41
LSM6-201ENST00000296581 PTPRAP18433 802 aa17.6■□□□□ 0.41
LSM6-201ENST00000296581 USP14P54578 494 aa17.6■□□□□ 0.41
LSM6-201ENST00000296581 NLRP12P59046 1061 aa17.6■□□□□ 0.41
LSM6-201ENST00000296581 POSTNQ15063 836 aa17.6■□□□□ 0.41
LSM6-201ENST00000296581 E2F4Q16254 413 aa17.6■□□□□ 0.41
LSM6-201ENST00000296581 SH3RF1Q7Z6J0 888 aa17.6■□□□□ 0.41
LSM6-201ENST00000296581 ZKSCAN4Q969J2 545 aaPredicted RBP17.6■□□□□ 0.41
LSM6-201ENST00000296581 DHX58Q96C10 678 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms