RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 PPP4R3BQ5MIZ7 849 aa12.53□□□□□ -0.4
RFC4-201ENST00000296273 FAM160B2Q86V87 743 aa12.53□□□□□ -0.4
RFC4-201ENST00000296273 CHD1LQ86WJ1 897 aa12.53□□□□□ -0.4
RFC4-201ENST00000296273 STK11IPQ8N1F8 1099 aa12.53□□□□□ -0.4
RFC4-201ENST00000296273 FAM133AQ8N9E0 248 aa12.53□□□□□ -0.4
RFC4-201ENST00000296273 SLC43A3Q8NBI5 491 aa12.53□□□□□ -0.4
RFC4-201ENST00000296273 CHURC1Q8WUH1 139 aa12.53□□□□□ -0.4
RFC4-201ENST00000296273 OSBP2Q969R2 916 aa12.53□□□□□ -0.4
RFC4-201ENST00000296273 GPATCH3Q96I76 525 aa12.53□□□□□ -0.4
RFC4-201ENST00000296273 PRDM12Q9H4Q4 367 aa12.53□□□□□ -0.4
RFC4-201ENST00000296273 GRXCR1A8MXD5 290 aa12.52□□□□□ -0.41
RFC4-201ENST00000296273 RNF113AO15541 343 aaKnown RBP12.52□□□□□ -0.41
RFC4-201ENST00000296273 GPAA1O43292 621 aa12.52□□□□□ -0.41
RFC4-201ENST00000296273 TSPY3P0CV98 308 aa12.52□□□□□ -0.41
RFC4-201ENST00000296273 TSPY8P0CW00 308 aa12.52□□□□□ -0.41
RFC4-201ENST00000296273 PDE4BQ07343 736 aa12.52□□□□□ -0.41
RFC4-201ENST00000296273 SLFN13Q68D06 897 aa12.52□□□□□ -0.41
RFC4-201ENST00000296273 NOL8Q76FK4 1167 aaKnown RBP12.52□□□□□ -0.41
RFC4-201ENST00000296273 PPM1EQ8WY54 764 aa12.52□□□□□ -0.41
RFC4-201ENST00000296273 ASB2Q96Q27 587 aa12.52□□□□□ -0.41
RFC4-201ENST00000296273 HIPK3Q9H422 1215 aa12.52□□□□□ -0.41
RFC4-201ENST00000296273 SLC28A3Q9HAS3 691 aa12.52□□□□□ -0.41
RFC4-201ENST00000296273 GNEQ9Y223 722 aaKnown RBP12.52□□□□□ -0.41
RFC4-201ENST00000296273 Q9Y3F1 56 aa12.52□□□□□ -0.41
RFC4-201ENST00000296273 PATL2C9JE40 543 aaKnown RBP12.51□□□□□ -0.41
RFC4-201ENST00000296273 TMEM232C9JQI7 657 aa12.51□□□□□ -0.41
RFC4-201ENST00000296273 PLA2G6O60733 806 aa12.51□□□□□ -0.41
RFC4-201ENST00000296273 APPP05067 770 aa12.51□□□□□ -0.41
RFC4-201ENST00000296273 SLC3A2P08195 630 aaKnown RBP12.51□□□□□ -0.41
RFC4-201ENST00000296273 COL9A1P20849 921 aa12.51□□□□□ -0.41
RFC4-201ENST00000296273 CYP2C18P33260 490 aa12.51□□□□□ -0.41
RFC4-201ENST00000296273 MRPS5P82675 430 aaKnown RBP12.51□□□□□ -0.41
RFC4-201ENST00000296273 BEX3Q00994 111 aa12.51□□□□□ -0.41
RFC4-201ENST00000296273 CNTN2Q02246 1040 aa12.51□□□□□ -0.41
RFC4-201ENST00000296273 ITGA7Q13683 1181 aa12.51□□□□□ -0.41
RFC4-201ENST00000296273 FSCN1Q16658 493 aaKnown RBP12.51□□□□□ -0.41
RFC4-201ENST00000296273 TLK2Q86UE8 772 aa12.51□□□□□ -0.41
RFC4-201ENST00000296273 RPUSD2Q8IZ73 545 aaKnown RBP12.51□□□□□ -0.41
RFC4-201ENST00000296273 LRRC47Q8N1G4 583 aaKnown RBP12.51□□□□□ -0.41
RFC4-201ENST00000296273 IL27Q8NEV9 243 aa12.51□□□□□ -0.41
RFC4-201ENST00000296273 NEDD1Q8NHV4 660 aa12.51□□□□□ -0.41
RFC4-201ENST00000296273 ANP32EQ9BTT0 268 aa12.51□□□□□ -0.41
RFC4-201ENST00000296273 NACAP1Q9BZK3 213 aa12.51□□□□□ -0.41
RFC4-201ENST00000296273 AP5M1Q9H0R1 490 aa12.51□□□□□ -0.41
RFC4-201ENST00000296273 TSPYL2Q9H2G4 693 aaPredicted RBP12.51□□□□□ -0.41
RFC4-201ENST00000296273 DCTPP1Q9H773 170 aa12.51□□□□□ -0.41
RFC4-201ENST00000296273 EPB41L4AQ9HCS5 686 aaPredicted RBP12.51□□□□□ -0.41
RFC4-201ENST00000296273 A1CFQ9NQ94 594 aaKnown RBP12.51□□□□□ -0.41
RFC4-201ENST00000296273 HOMER2Q9NSB8 354 aa12.51□□□□□ -0.41
RFC4-201ENST00000296273 MYH4Q9Y623 1939 aa12.5□□□□□ -0.41
RFC4-201ENST00000296273 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.5□□□□□ -0.41
RFC4-201ENST00000296273 PRDM1O75626 825 aa12.5□□□□□ -0.41
RFC4-201ENST00000296273 IGFBP4P22692 258 aa12.5□□□□□ -0.41
RFC4-201ENST00000296273 SLC1A4P43007 532 aa12.5□□□□□ -0.41
RFC4-201ENST00000296273 IQSEC1Q6DN90 963 aa12.5□□□□□ -0.41
RFC4-201ENST00000296273 CXCL17Q6UXB2 119 aa12.5□□□□□ -0.41
RFC4-201ENST00000296273 IFNL3Q8IZI9 196 aa12.5□□□□□ -0.41
RFC4-201ENST00000296273 STAG1Q8WVM7 1258 aa12.5□□□□□ -0.41
RFC4-201ENST00000296273 GMCL1Q96IK5 515 aa12.5□□□□□ -0.41
RFC4-201ENST00000296273 RNF146Q9NTX7 359 aa12.5□□□□□ -0.41
RFC4-201ENST00000296273 ASTN1O14525 1302 aa12.49□□□□□ -0.41
RFC4-201ENST00000296273 ZNF536O15090 1300 aa12.49□□□□□ -0.41
RFC4-201ENST00000296273 SOWAHBA6NEL2 793 aa12.49□□□□□ -0.41
RFC4-201ENST00000296273 PFKMP08237 780 aa12.49□□□□□ -0.41
RFC4-201ENST00000296273 IKQ13123 557 aaPredicted RBP12.49□□□□□ -0.41
RFC4-201ENST00000296273 ADGRE1Q14246 886 aa12.49□□□□□ -0.41
RFC4-201ENST00000296273 TRERF1Q96PN7 1200 aa12.49□□□□□ -0.41
RFC4-201ENST00000296273 NKX2-4Q9H2Z4 354 aa12.49□□□□□ -0.41
RFC4-201ENST00000296273 CXXC1Q9P0U4 656 aaPredicted RBP12.49□□□□□ -0.41
RFC4-201ENST00000296273 DAXXQ9UER7 740 aaPredicted RBP12.49□□□□□ -0.41
RFC4-201ENST00000296273 ISY1Q9ULR0 285 aaKnown RBP12.49□□□□□ -0.41
RFC4-201ENST00000296273 MUC3AQ02505 3323 aa12.48□□□□□ -0.41
RFC4-201ENST00000296273 LOC102724159A0A0B4J2E5 919 aa12.48□□□□□ -0.41
RFC4-201ENST00000296273 DYNC1LI2O43237 492 aaPredicted RBP12.48□□□□□ -0.41
RFC4-201ENST00000296273 SMARCA5O60264 1052 aaPredicted RBP12.48□□□□□ -0.41
RFC4-201ENST00000296273 B4GALT4O60513 344 aa12.48□□□□□ -0.41
RFC4-201ENST00000296273 SUPT20HL2P0C7V6 817 aa12.48□□□□□ -0.41
RFC4-201ENST00000296273 ALAS1P13196 640 aa12.48□□□□□ -0.41
RFC4-201ENST00000296273 SMPD1P17405 629 aa12.48□□□□□ -0.41
RFC4-201ENST00000296273 TFAP4Q01664 338 aa12.48□□□□□ -0.41
RFC4-201ENST00000296273 PWP2Q15269 919 aaKnown RBP12.48□□□□□ -0.41
RFC4-201ENST00000296273 BMP2KLQ5H9B9 411 aa12.48□□□□□ -0.41
RFC4-201ENST00000296273 OTOP2Q7RTS6 562 aa12.48□□□□□ -0.41
RFC4-201ENST00000296273 ADAMTS19Q8TE59 1207 aa12.48□□□□□ -0.41
RFC4-201ENST00000296273 AGBL1Q96MI9 1066 aa12.48□□□□□ -0.41
RFC4-201ENST00000296273 UHRF1Q96T88 793 aaPredicted RBP12.48□□□□□ -0.41
RFC4-201ENST00000296273 NOC4LQ9BVI4 516 aaKnown RBP12.48□□□□□ -0.41
RFC4-201ENST00000296273 NAPBQ9H115 298 aa12.48□□□□□ -0.41
RFC4-201ENST00000296273 VTA1Q9NP79 307 aa12.48□□□□□ -0.41
RFC4-201ENST00000296273 PCDHA11Q9Y5I1 949 aa12.48□□□□□ -0.41
RFC4-201ENST00000296273 SLC4A7Q9Y6M7 1214 aa12.48□□□□□ -0.41
RFC4-201ENST00000296273 GRIN2DO15399 1336 aa12.47□□□□□ -0.41
RFC4-201ENST00000296273 UMODL1Q5DID0 1318 aa12.47□□□□□ -0.41
RFC4-201ENST00000296273 M0R2C6 588 aa12.47□□□□□ -0.41
RFC4-201ENST00000296273 CCL23P55773 120 aa12.47□□□□□ -0.41
RFC4-201ENST00000296273 PPARAQ07869 468 aa12.47□□□□□ -0.41
RFC4-201ENST00000296273 CCDC85BQ15834 202 aaPredicted RBP12.47□□□□□ -0.41
RFC4-201ENST00000296273 AAK1Q2M2I8 961 aa12.47□□□□□ -0.41
RFC4-201ENST00000296273 PPP2R2DQ66LE6 453 aa12.47□□□□□ -0.41
RFC4-201ENST00000296273 RCSD1Q6JBY9 416 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms