RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 SCN9AQ15858 1988 aa15.78■□□□□ 0.12
NXF1-201ENST00000294172 PSDA5PKW4 1024 aaPredicted RBP15.77■□□□□ 0.12
NXF1-201ENST00000294172 C21orf2O43822 256 aa15.77■□□□□ 0.12
NXF1-201ENST00000294172 TDP2O95551 362 aa15.77■□□□□ 0.12
NXF1-201ENST00000294172 PRCPP42785 496 aa15.77■□□□□ 0.12
NXF1-201ENST00000294172 HDLBPQ00341 1268 aaKnown RBP15.77■□□□□ 0.12
NXF1-201ENST00000294172 CALCRLQ16602 461 aa15.77■□□□□ 0.12
NXF1-201ENST00000294172 APTXQ7Z2E3 356 aaKnown RBP15.77■□□□□ 0.12
NXF1-201ENST00000294172 C7orf43Q8WVR3 580 aa15.77■□□□□ 0.12
NXF1-201ENST00000294172 IDI2Q9BXS1 227 aa15.77■□□□□ 0.12
NXF1-201ENST00000294172 SERPINA10Q9UK55 444 aa15.77■□□□□ 0.12
NXF1-201ENST00000294172 PPIP5K2O43314 1243 aa15.77■□□□□ 0.11
NXF1-201ENST00000294172 KMT5BQ4FZB7 885 aa15.77■□□□□ 0.11
NXF1-201ENST00000294172 FILIP1LQ4L180 1135 aa15.77■□□□□ 0.11
NXF1-201ENST00000294172 KBTBD4Q9NVX7 518 aa15.77■□□□□ 0.11
NXF1-201ENST00000294172 ZBTB5O15062 677 aa15.76■□□□□ 0.11
NXF1-201ENST00000294172 SLC37A4O43826 429 aa15.76■□□□□ 0.11
NXF1-201ENST00000294172 GDF11O95390 407 aa15.76■□□□□ 0.11
NXF1-201ENST00000294172 CCT6AP40227 531 aaKnown RBP15.76■□□□□ 0.11
NXF1-201ENST00000294172 SLC1A4P43007 532 aa15.76■□□□□ 0.11
NXF1-201ENST00000294172 KCNJ6P48051 423 aa15.76■□□□□ 0.11
NXF1-201ENST00000294172 SEPT2Q15019 361 aa15.76■□□□□ 0.11
NXF1-201ENST00000294172 MTERF4Q7Z6M4 381 aaKnown RBP15.76■□□□□ 0.11
NXF1-201ENST00000294172 CTAGE1Q96RT6 745 aa15.76■□□□□ 0.11
NXF1-201ENST00000294172 ARID3AQ99856 593 aa15.76■□□□□ 0.11
NXF1-201ENST00000294172 BAG1Q99933 345 aaPredicted RBP15.76■□□□□ 0.11
NXF1-201ENST00000294172 RIC8AQ9NPQ8 531 aa15.76■□□□□ 0.11
NXF1-201ENST00000294172 ADD3Q9UEY8 706 aaKnown RBP15.76■□□□□ 0.11
NXF1-201ENST00000294172 PPP4R3BQ5MIZ7 849 aa15.76■□□□□ 0.11
NXF1-201ENST00000294172 TC2NQ8N9U0 490 aa15.76■□□□□ 0.11
NXF1-201ENST00000294172 CPLX3Q8WVH0 158 aa15.76■□□□□ 0.11
NXF1-201ENST00000294172 CUL5Q93034 780 aa15.76■□□□□ 0.11
NXF1-201ENST00000294172 KANSL2Q9H9L4 492 aa15.76■□□□□ 0.11
NXF1-201ENST00000294172 SLFN13Q68D06 897 aa15.75■□□□□ 0.11
NXF1-201ENST00000294172 IGSF22Q8N9C0 903 aa15.75■□□□□ 0.11
NXF1-201ENST00000294172 KIF18AQ8NI77 898 aa15.75■□□□□ 0.11
NXF1-201ENST00000294172 PDGFDQ9GZP0 370 aaPredicted RBP15.75■□□□□ 0.11
NXF1-201ENST00000294172 PSTPIP2Q9H939 334 aa15.75■□□□□ 0.11
NXF1-201ENST00000294172 MRPL12P52815 198 aaKnown RBP15.74■□□□□ 0.11
NXF1-201ENST00000294172 ICA1Q05084 483 aa15.74■□□□□ 0.11
NXF1-201ENST00000294172 KRT31Q15323 416 aa15.74■□□□□ 0.11
NXF1-201ENST00000294172 PPP1R18Q6NYC8 613 aa15.74■□□□□ 0.11
NXF1-201ENST00000294172 TMEM139Q8IV31 216 aa15.74■□□□□ 0.11
NXF1-201ENST00000294172 CALML4Q96GE6 196 aa15.74■□□□□ 0.11
NXF1-201ENST00000294172 PRMT6Q96LA8 375 aaPredicted RBP15.74■□□□□ 0.11
NXF1-201ENST00000294172 MTMR9Q96QG7 549 aa15.74■□□□□ 0.11
NXF1-201ENST00000294172 LRWD1Q9UFC0 647 aa15.74■□□□□ 0.11
NXF1-201ENST00000294172 TRIM49BA6NDI0 452 aa15.74■□□□□ 0.11
NXF1-201ENST00000294172 YDJCA8MPS7 323 aa15.74■□□□□ 0.11
NXF1-201ENST00000294172 KLRC4O43908 158 aa15.74■□□□□ 0.11
NXF1-201ENST00000294172 MYL1P05976 194 aa15.74■□□□□ 0.11
NXF1-201ENST00000294172 ORC2Q13416 577 aaPredicted RBP15.74■□□□□ 0.11
NXF1-201ENST00000294172 KCNB1Q14721 858 aa15.74■□□□□ 0.11
NXF1-201ENST00000294172 PPFIBP1Q86W92 1011 aa15.74■□□□□ 0.11
NXF1-201ENST00000294172 ADSSL1Q8N142 457 aa15.74■□□□□ 0.11
NXF1-201ENST00000294172 CAMKK2Q96RR4 588 aa15.74■□□□□ 0.11
NXF1-201ENST00000294172 MMTAG2Q9BU76 263 aaKnown RBP15.74■□□□□ 0.11
NXF1-201ENST00000294172 VPS16Q9H269 839 aa15.74■□□□□ 0.11
NXF1-201ENST00000294172 CUEDC2Q9H467 287 aa15.74■□□□□ 0.11
NXF1-201ENST00000294172 KIF2AO00139 706 aaPredicted RBP15.73■□□□□ 0.11
NXF1-201ENST00000294172 N4BP3O15049 544 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 ARHGAP6O43182 974 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 EDIL3O43854 480 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 TMEM266Q2M3C6 531 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 ABCB5Q2M3G0 1257 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 SYT10Q6XYQ8 523 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 SUPT20HQ8NEM7 779 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 TAB2Q9NYJ8 693 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 NYAP2Q9P242 653 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 MYH4Q9Y623 1939 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 KCNJ18B7U540 433 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 AKR1B15C9JRZ8 316 aaPredicted RBP15.73■□□□□ 0.11
NXF1-201ENST00000294172 CCP110O43303 1012 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 RHOBTB3O94955 611 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 ASIC1P78348 528 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 RBL2Q08999 1139 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 STIM1Q13586 685 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 KCNJ12Q14500 433 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 QRICH1Q2TAL8 776 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 TCP11X2Q5H9J9 407 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 TATDN1Q6P1N9 297 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 SIAH1Q8IUQ4 282 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 ANKRD20A12PQ8NF67 263 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 MKL1Q969V6 931 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 NUP88Q99567 741 aaPredicted RBP15.73■□□□□ 0.11
NXF1-201ENST00000294172 TRIM9Q9C026 710 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 MAGEF1Q9HAY2 307 aa15.73■□□□□ 0.11
NXF1-201ENST00000294172 TNS1Q9HBL0 1735 aaKnown RBP15.73■□□□□ 0.11
NXF1-201ENST00000294172 POTEMA6NI47 508 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 USP17L15C9J2P7 530 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 USP17L13C9JLJ4 530 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 USP17L11C9JVI0 530 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 USP17L18D6R9N7 530 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 USP17L22D6RA61 530 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 USP17L17D6RBQ6 530 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 USP17L19D6RCP7 530 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 USP17L20D6RJB6 530 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 CTIFO43310 598 aaKnown RBP15.72■□□□□ 0.11
NXF1-201ENST00000294172 MARCH6O60337 910 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 PMS1P54277 932 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms