RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 SAP30BPQ9UHR5 308 aaKnown RBP18.87■□□□□ 0.61
CHRNE-201ENST00000293780 FLT1P17948 1338 aa18.87■□□□□ 0.61
CHRNE-201ENST00000293780 PSMD14O00487 310 aa18.86■□□□□ 0.61
CHRNE-201ENST00000293780 SRGNP10124 158 aa18.86■□□□□ 0.61
CHRNE-201ENST00000293780 TUBB4BP68371 445 aa18.86■□□□□ 0.61
CHRNE-201ENST00000293780 TSR1Q2NL82 804 aaKnown RBP18.86■□□□□ 0.61
CHRNE-201ENST00000293780 CABP7Q86V35 215 aa18.86■□□□□ 0.61
CHRNE-201ENST00000293780 ZNF444Q8N0Y2 327 aaPredicted RBP18.86■□□□□ 0.61
CHRNE-201ENST00000293780 DAGLBQ8NCG7 672 aa18.86■□□□□ 0.61
CHRNE-201ENST00000293780 SETDB2Q96T68 719 aa18.86■□□□□ 0.61
CHRNE-201ENST00000293780 TTYH3Q9C0H2 523 aa18.86■□□□□ 0.61
CHRNE-201ENST00000293780 LACRTQ9GZZ8 138 aa18.86■□□□□ 0.61
CHRNE-201ENST00000293780 EXOC1Q9NV70 894 aa18.86■□□□□ 0.61
CHRNE-201ENST00000293780 CCDC88AQ3V6T2 1871 aa18.86■□□□□ 0.61
CHRNE-201ENST00000293780 IRS2Q9Y4H2 1338 aa18.86■□□□□ 0.61
CHRNE-201ENST00000293780 TM4SF1P30408 202 aa18.86■□□□□ 0.61
CHRNE-201ENST00000293780 GNAQP50148 359 aa18.86■□□□□ 0.61
CHRNE-201ENST00000293780 DNM2P50570 870 aa18.86■□□□□ 0.61
CHRNE-201ENST00000293780 PDE4DQ08499 809 aa18.86■□□□□ 0.61
CHRNE-201ENST00000293780 LETM2Q2VYF4 491 aa18.86■□□□□ 0.61
CHRNE-201ENST00000293780 CCDC178Q5BJE1 867 aa18.86■□□□□ 0.61
CHRNE-201ENST00000293780 MEX3CQ5U5Q3 659 aaKnown RBP18.86■□□□□ 0.61
CHRNE-201ENST00000293780 CCDC148Q8NFR7 591 aa18.86■□□□□ 0.61
CHRNE-201ENST00000293780 EXOC4Q96A65 974 aa18.86■□□□□ 0.61
CHRNE-201ENST00000293780 CAPZA3Q96KX2 299 aa18.86■□□□□ 0.61
CHRNE-201ENST00000293780 DUSP10Q9Y6W6 482 aa18.86■□□□□ 0.61
CHRNE-201ENST00000293780 PALM3A6NDB9 673 aaPredicted RBP18.85■□□□□ 0.61
CHRNE-201ENST00000293780 LRRIQ3A6PVS8 624 aaPredicted RBP18.85■□□□□ 0.61
CHRNE-201ENST00000293780 VGLL3A8MV65 326 aa18.85■□□□□ 0.61
CHRNE-201ENST00000293780 CCNT1O60563 726 aaKnown RBP18.85■□□□□ 0.61
CHRNE-201ENST00000293780 LDHBP07195 334 aaKnown RBP18.85■□□□□ 0.61
CHRNE-201ENST00000293780 TRIM21P19474 475 aaKnown RBP18.85■□□□□ 0.61
CHRNE-201ENST00000293780 TBC1D8BQ0IIM8 1120 aa18.85■□□□□ 0.61
CHRNE-201ENST00000293780 MAPKAPK5Q8IW41 473 aa18.85■□□□□ 0.61
CHRNE-201ENST00000293780 GPR101Q96P66 508 aaPredicted RBP18.85■□□□□ 0.61
CHRNE-201ENST00000293780 FAN1Q9Y2M0 1017 aa18.85■□□□□ 0.61
CHRNE-201ENST00000293780 COL5A3P25940 1745 aaPredicted RBP18.85■□□□□ 0.61
CHRNE-201ENST00000293780 TULP2O00295 520 aa18.85■□□□□ 0.61
CHRNE-201ENST00000293780 SPTY2D1Q68D10 685 aaPredicted RBP18.85■□□□□ 0.61
CHRNE-201ENST00000293780 KIAA1328Q86T90 577 aa18.85■□□□□ 0.61
CHRNE-201ENST00000293780 P2RX5Q93086 422 aa18.85■□□□□ 0.61
CHRNE-201ENST00000293780 DHTKD1Q96HY7 919 aaPredicted RBP18.85■□□□□ 0.61
CHRNE-201ENST00000293780 CNOT6LQ96LI5 555 aaKnown RBP18.85■□□□□ 0.61
CHRNE-201ENST00000293780 TRIM9Q9C026 710 aa18.85■□□□□ 0.61
CHRNE-201ENST00000293780 KLRF2D3W0D1 207 aa18.84■□□□□ 0.61
CHRNE-201ENST00000293780 TECP42680 631 aa18.84■□□□□ 0.61
CHRNE-201ENST00000293780 MEA1Q16626 185 aa18.84■□□□□ 0.61
CHRNE-201ENST00000293780 JAKMIP2Q96AA8 810 aa18.84■□□□□ 0.61
CHRNE-201ENST00000293780 NHEJ1Q9H9Q4 299 aaPredicted RBP18.84■□□□□ 0.61
CHRNE-201ENST00000293780 SAR1BQ9Y6B6 198 aa18.84■□□□□ 0.61
CHRNE-201ENST00000293780 PHACTR2O75167 634 aa18.84■□□□□ 0.61
CHRNE-201ENST00000293780 MYL1P05976 194 aa18.84■□□□□ 0.61
CHRNE-201ENST00000293780 CCNE1P24864 410 aa18.84■□□□□ 0.61
CHRNE-201ENST00000293780 NAPAP54920 295 aa18.84■□□□□ 0.61
CHRNE-201ENST00000293780 ASIC1P78348 528 aa18.84■□□□□ 0.61
CHRNE-201ENST00000293780 CYP27A1Q02318 531 aa18.84■□□□□ 0.61
CHRNE-201ENST00000293780 FAM98CQ17RN3 349 aaKnown RBP18.84■□□□□ 0.61
CHRNE-201ENST00000293780 PCMTD1Q96MG8 357 aaPredicted RBP18.84■□□□□ 0.61
CHRNE-201ENST00000293780 VAT1LQ9HCJ6 419 aa18.84■□□□□ 0.61
CHRNE-201ENST00000293780 TCP11L1Q9NUJ3 509 aa18.84■□□□□ 0.61
CHRNE-201ENST00000293780 USP21Q9UK80 565 aa18.84■□□□□ 0.61
CHRNE-201ENST00000293780 OR52Z1P0C646 297 aa18.83■□□□□ 0.61
CHRNE-201ENST00000293780 RASA1P20936 1047 aa18.83■□□□□ 0.61
CHRNE-201ENST00000293780 PRPHP41219 470 aa18.83■□□□□ 0.61
CHRNE-201ENST00000293780 ZSCAN26Q16670 478 aa18.83■□□□□ 0.61
CHRNE-201ENST00000293780 FNBP4Q8N3X1 1017 aaPredicted RBP18.83■□□□□ 0.61
CHRNE-201ENST00000293780 NYXQ9GZU5 481 aa18.83■□□□□ 0.61
CHRNE-201ENST00000293780 SMCO2A6NFE2 343 aa18.83■□□□□ 0.6
CHRNE-201ENST00000293780 ZNF185O15231 689 aa18.83■□□□□ 0.6
CHRNE-201ENST00000293780 CAPN2P17655 700 aa18.83■□□□□ 0.6
CHRNE-201ENST00000293780 MTIF2P46199 727 aaKnown RBP18.83■□□□□ 0.6
CHRNE-201ENST00000293780 USP14P54578 494 aa18.83■□□□□ 0.6
CHRNE-201ENST00000293780 MIIPQ5JXC2 388 aa18.83■□□□□ 0.6
CHRNE-201ENST00000293780 GALNT17Q6IS24 598 aa18.83■□□□□ 0.6
CHRNE-201ENST00000293780 WDR93Q6P2C0 686 aa18.83■□□□□ 0.6
CHRNE-201ENST00000293780 USP17L2Q6R6M4 530 aa18.83■□□□□ 0.6
CHRNE-201ENST00000293780 CCDC102AQ96A19 550 aa18.83■□□□□ 0.6
CHRNE-201ENST00000293780 ZMYND12Q9H0C1 365 aa18.83■□□□□ 0.6
CHRNE-201ENST00000293780 PSD3Q9NYI0 1048 aa18.83■□□□□ 0.6
CHRNE-201ENST00000293780 ANKIB1Q9P2G1 1089 aa18.83■□□□□ 0.6
CHRNE-201ENST00000293780 NARFQ9UHQ1 456 aa18.83■□□□□ 0.6
CHRNE-201ENST00000293780 LAD1O00515 517 aa18.82■□□□□ 0.6
CHRNE-201ENST00000293780 ZMYND10O75800 440 aa18.82■□□□□ 0.6
CHRNE-201ENST00000293780 EIF3JO75822 258 aaKnown RBP18.82■□□□□ 0.6
CHRNE-201ENST00000293780 KRT83P78385 493 aa18.82■□□□□ 0.6
CHRNE-201ENST00000293780 PAPD7Q5XG87 772 aaKnown RBP18.82■□□□□ 0.6
CHRNE-201ENST00000293780 NOC3LQ8WTT2 800 aaKnown RBP18.82■□□□□ 0.6
CHRNE-201ENST00000293780 NOC4LQ9BVI4 516 aaKnown RBP18.82■□□□□ 0.6
CHRNE-201ENST00000293780 GBP3Q9H0R5 595 aa18.82■□□□□ 0.6
CHRNE-201ENST00000293780 PLEKP08567 350 aaPredicted RBP18.82■□□□□ 0.6
CHRNE-201ENST00000293780 AMIGO3Q86WK7 504 aa18.82■□□□□ 0.6
CHRNE-201ENST00000293780 C7orf25Q9BPX7 421 aa18.82■□□□□ 0.6
CHRNE-201ENST00000293780 MMTAG2Q9BU76 263 aaKnown RBP18.82■□□□□ 0.6
CHRNE-201ENST00000293780 CYLC1P35663 651 aaPredicted RBP18.81■□□□□ 0.6
CHRNE-201ENST00000293780 VPS72Q15906 364 aa18.81■□□□□ 0.6
CHRNE-201ENST00000293780 GPIHBP1Q8IV16 184 aa18.81■□□□□ 0.6
CHRNE-201ENST00000293780 KIAA0895Q8NCT3 520 aa18.81■□□□□ 0.6
CHRNE-201ENST00000293780 SLC39A2Q9NP94 309 aa18.81■□□□□ 0.6
CHRNE-201ENST00000293780 ZNHIT6Q9NWK9 470 aaKnown RBP18.81■□□□□ 0.6
CHRNE-201ENST00000293780 ROBO3Q96MS0 1386 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms