RNA–Protein interactions for RNA: ENST00000292729.12

USP41-201, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP41, Length 920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-201ENST00000292729 DYNC1LI2O43237 492 aaPredicted RBP12.48□□□□□ -0.41
USP41-201ENST00000292729 NDUFB10O96000 172 aa12.48□□□□□ -0.41
USP41-201ENST00000292729 ADD2P35612 726 aa12.48□□□□□ -0.41
USP41-201ENST00000292729 TAP1Q03518 808 aa12.48□□□□□ -0.41
USP41-201ENST00000292729 KIFC2Q96AC6 838 aa12.48□□□□□ -0.41
USP41-201ENST00000292729 DNAJC2Q99543 621 aaKnown RBP12.48□□□□□ -0.41
USP41-201ENST00000292729 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.48□□□□□ -0.41
USP41-201ENST00000292729 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.48□□□□□ -0.41
USP41-201ENST00000292729 KCNH6Q9H252 994 aa12.48□□□□□ -0.41
USP41-201ENST00000292729 ALDH8A1Q9H2A2 487 aaPredicted RBP12.48□□□□□ -0.41
USP41-201ENST00000292729 C1orf115Q9H7X2 142 aa12.48□□□□□ -0.41
USP41-201ENST00000292729 ACAD9Q9H845 621 aa12.48□□□□□ -0.41
USP41-201ENST00000292729 ARPP21Q9UBL0 812 aaPredicted RBP12.48□□□□□ -0.41
USP41-201ENST00000292729 SYNPO2Q9UMS6 1093 aa12.48□□□□□ -0.41
USP41-201ENST00000292729 PTPRSQ13332 1948 aa12.47□□□□□ -0.41
USP41-201ENST00000292729 ZNF316A6NFI3 1004 aaPredicted RBP12.47□□□□□ -0.41
USP41-201ENST00000292729 EPOPA6NHQ4 379 aa12.47□□□□□ -0.41
USP41-201ENST00000292729 SMPD1P17405 629 aa12.47□□□□□ -0.41
USP41-201ENST00000292729 GRB10Q13322 594 aa12.47□□□□□ -0.41
USP41-201ENST00000292729 KRT40Q6A162 431 aa12.47□□□□□ -0.41
USP41-201ENST00000292729 CTR9Q6PD62 1173 aa12.47□□□□□ -0.41
USP41-201ENST00000292729 DEFB128Q7Z7B8 93 aa12.47□□□□□ -0.41
USP41-201ENST00000292729 HERC6Q8IVU3 1022 aa12.47□□□□□ -0.41
USP41-201ENST00000292729 CLASRPQ8N2M8 674 aaKnown RBP12.47□□□□□ -0.41
USP41-201ENST00000292729 POLR3EQ9NVU0 708 aa12.47□□□□□ -0.41
USP41-201ENST00000292729 EXOC6BQ9Y2D4 811 aa12.47□□□□□ -0.41
USP41-201ENST00000292729 TNKSO95271 1327 aa12.46□□□□□ -0.41
USP41-201ENST00000292729 PITPNM1O00562 1244 aa12.46□□□□□ -0.41
USP41-201ENST00000292729 BAIAP3O94812 1187 aa12.46□□□□□ -0.41
USP41-201ENST00000292729 ALADP13716 330 aa12.46□□□□□ -0.41
USP41-201ENST00000292729 MRE11P49959 708 aa12.46□□□□□ -0.41
USP41-201ENST00000292729 PSMC6P62333 389 aa12.46□□□□□ -0.41
USP41-201ENST00000292729 CNTN2Q02246 1040 aa12.46□□□□□ -0.41
USP41-201ENST00000292729 UBE3CQ15386 1083 aa12.46□□□□□ -0.41
USP41-201ENST00000292729 TKFCQ3LXA3 575 aa12.46□□□□□ -0.41
USP41-201ENST00000292729 RPAP2Q8IXW5 612 aaPredicted RBP12.46□□□□□ -0.41
USP41-201ENST00000292729 MKL1Q969V6 931 aa12.46□□□□□ -0.41
USP41-201ENST00000292729 MKNK2Q9HBH9 465 aa12.46□□□□□ -0.41
USP41-201ENST00000292729 PAG1Q9NWQ8 432 aa12.46□□□□□ -0.41
USP41-201ENST00000292729 COG6Q9Y2V7 657 aa12.46□□□□□ -0.41
USP41-201ENST00000292729 SLC4A4Q9Y6R1 1079 aa12.46□□□□□ -0.41
USP41-201ENST00000292729 TRIP12Q14669 1992 aaPredicted RBP12.46□□□□□ -0.41
USP41-201ENST00000292729 SCN10AQ9Y5Y9 1956 aa12.46□□□□□ -0.41
USP41-201ENST00000292729 SIP14410 1827 aa12.46□□□□□ -0.42
USP41-201ENST00000292729 TET1Q8NFU7 2136 aa12.46□□□□□ -0.42
USP41-201ENST00000292729 SOWAHBA6NEL2 793 aa12.45□□□□□ -0.42
USP41-201ENST00000292729 LPXNO60711 386 aa12.45□□□□□ -0.42
USP41-201ENST00000292729 RASA1P20936 1047 aa12.45□□□□□ -0.42
USP41-201ENST00000292729 CSPP1Q1MSJ5 1256 aa12.45□□□□□ -0.42
USP41-201ENST00000292729 SBK1Q52WX2 424 aa12.45□□□□□ -0.42
USP41-201ENST00000292729 TAPT1Q6NXT6 567 aa12.45□□□□□ -0.42
USP41-201ENST00000292729 CEP85Q6P2H3 762 aa12.45□□□□□ -0.42
USP41-201ENST00000292729 FAM178BQ8IXR5 827 aa12.45□□□□□ -0.42
USP41-201ENST00000292729 GJD3Q8N144 294 aa12.45□□□□□ -0.42
USP41-201ENST00000292729 RETREG2Q8NC44 543 aa12.45□□□□□ -0.42
USP41-201ENST00000292729 RHPN1Q8TCX5 695 aa12.45□□□□□ -0.42
USP41-201ENST00000292729 IL1RAPL2Q9NP60 686 aa12.45□□□□□ -0.42
USP41-201ENST00000292729 VTA1Q9NP79 307 aa12.45□□□□□ -0.42
USP41-201ENST00000292729 CD320Q9NPF0 282 aa12.45□□□□□ -0.42
USP41-201ENST00000292729 A1CFQ9NQ94 594 aaKnown RBP12.45□□□□□ -0.42
USP41-201ENST00000292729 TRMT13Q9NUP7 481 aaKnown RBP12.45□□□□□ -0.42
USP41-201ENST00000292729 CLIP2Q9UDT6 1046 aa12.45□□□□□ -0.42
USP41-201ENST00000292729 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.44□□□□□ -0.42
USP41-201ENST00000292729 IFIT2P09913 472 aaKnown RBP12.44□□□□□ -0.42
USP41-201ENST00000292729 CYP2C9P11712 490 aa12.44□□□□□ -0.42
USP41-201ENST00000292729 KCNJ6P48051 423 aa12.44□□□□□ -0.42
USP41-201ENST00000292729 CPT1AP50416 773 aa12.44□□□□□ -0.42
USP41-201ENST00000292729 LEXMQ3ZCV2 418 aa12.44□□□□□ -0.42
USP41-201ENST00000292729 ZSCAN25Q6NSZ9 544 aa12.44□□□□□ -0.42
USP41-201ENST00000292729 FTSJ3Q8IY81 847 aaKnown RBP12.44□□□□□ -0.42
USP41-201ENST00000292729 GMCL1P1Q8NEA9 526 aa12.44□□□□□ -0.42
USP41-201ENST00000292729 SNX27Q96L92 541 aa12.44□□□□□ -0.42
USP41-201ENST00000292729 FTOQ9C0B1 505 aaKnown RBP eCLIP12.44□□□□□ -0.42
USP41-201ENST00000292729 UBE2ZQ9H832 354 aaPredicted RBP12.44□□□□□ -0.42
USP41-201ENST00000292729 ZNF287Q9HBT7 754 aa12.44□□□□□ -0.42
USP41-201ENST00000292729 HOMER2Q9NSB8 354 aa12.44□□□□□ -0.42
USP41-201ENST00000292729 RNF146Q9NTX7 359 aa12.44□□□□□ -0.42
USP41-201ENST00000292729 LCTP09848 1927 aa12.44□□□□□ -0.42
USP41-201ENST00000292729 IGKV6D-41A0A0C4DH26 115 aa12.43□□□□□ -0.42
USP41-201ENST00000292729 ARHGEF15O94989 841 aa12.43□□□□□ -0.42
USP41-201ENST00000292729 IQCF3P0C7M6 154 aa12.43□□□□□ -0.42
USP41-201ENST00000292729 BMP3P12645 472 aa12.43□□□□□ -0.42
USP41-201ENST00000292729 STAT2P52630 851 aa12.43□□□□□ -0.42
USP41-201ENST00000292729 PURAQ00577 322 aaKnown RBP12.43□□□□□ -0.42
USP41-201ENST00000292729 PTPN11Q06124 597 aaPredicted RBP12.43□□□□□ -0.42
USP41-201ENST00000292729 BFSP2Q13515 415 aa12.43□□□□□ -0.42
USP41-201ENST00000292729 LRRFIP1Q32MZ4 808 aaKnown RBP12.43□□□□□ -0.42
USP41-201ENST00000292729 PUS10Q3MIT2 529 aaKnown RBP12.43□□□□□ -0.42
USP41-201ENST00000292729 DUSP28Q4G0W2 176 aa12.43□□□□□ -0.42
USP41-201ENST00000292729 BRDTQ58F21 947 aaPredicted RBP12.43□□□□□ -0.42
USP41-201ENST00000292729 GIMAP6Q6P9H5 292 aa12.43□□□□□ -0.42
USP41-201ENST00000292729 KIAA1211Q6ZU35 1233 aa12.43□□□□□ -0.42
USP41-201ENST00000292729 FAM160B2Q86V87 743 aa12.43□□□□□ -0.42
USP41-201ENST00000292729 ITPRIPQ8IWB1 547 aa12.43□□□□□ -0.42
USP41-201ENST00000292729 MORC4Q8TE76 937 aa12.43□□□□□ -0.42
USP41-201ENST00000292729 CHURC1Q8WUH1 139 aa12.43□□□□□ -0.42
USP41-201ENST00000292729 KIF1BPQ96EK5 621 aa12.43□□□□□ -0.42
USP41-201ENST00000292729 TRERF1Q96PN7 1200 aa12.43□□□□□ -0.42
USP41-201ENST00000292729 MTG1Q9BT17 334 aaPredicted RBP12.43□□□□□ -0.42
USP41-201ENST00000292729 GPHNQ9NQX3 736 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms