RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 AGBL1Q96MI9 1066 aa10.76□□□□□ -0.69
HMGN1-201ENST00000288344 TEX13BQ9BXU2 312 aa10.76□□□□□ -0.69
HMGN1-201ENST00000288344 UNC93B1Q9H1C4 597 aa10.76□□□□□ -0.69
HMGN1-201ENST00000288344 RAVER2Q9HCJ3 691 aaKnown RBP10.76□□□□□ -0.69
HMGN1-201ENST00000288344 TOMM22Q9NS69 142 aa10.76□□□□□ -0.69
HMGN1-201ENST00000288344 DIS3Q9Y2L1 958 aaKnown RBP10.76□□□□□ -0.69
HMGN1-201ENST00000288344 ASTN1O14525 1302 aa10.75□□□□□ -0.69
HMGN1-201ENST00000288344 HMGCRP04035 888 aa10.75□□□□□ -0.69
HMGN1-201ENST00000288344 CCL5P13501 91 aa10.75□□□□□ -0.69
HMGN1-201ENST00000288344 HSPA4P34932 840 aa10.75□□□□□ -0.69
HMGN1-201ENST00000288344 SLC16A2P36021 539 aa10.75□□□□□ -0.69
HMGN1-201ENST00000288344 RGS2P41220 211 aa10.75□□□□□ -0.69
HMGN1-201ENST00000288344 CACNB2Q08289 660 aaPredicted RBP10.75□□□□□ -0.69
HMGN1-201ENST00000288344 ADCK5Q3MIX3 580 aa10.75□□□□□ -0.69
HMGN1-201ENST00000288344 OLFML2BQ68BL8 750 aa10.75□□□□□ -0.69
HMGN1-201ENST00000288344 MAMDC4Q6UXC1 1216 aa10.75□□□□□ -0.69
HMGN1-201ENST00000288344 CHST3Q7LGC8 479 aa10.75□□□□□ -0.69
HMGN1-201ENST00000288344 STAG2Q8N3U4 1231 aa10.75□□□□□ -0.69
HMGN1-201ENST00000288344 CLEC4DQ8WXI8 215 aa10.75□□□□□ -0.69
HMGN1-201ENST00000288344 APBA2Q99767 749 aa10.75□□□□□ -0.69
HMGN1-201ENST00000288344 LY9Q9HBG7 655 aa10.75□□□□□ -0.69
HMGN1-201ENST00000288344 MAD2L2Q9UI95 211 aa10.75□□□□□ -0.69
HMGN1-201ENST00000288344 BAZ2BQ9UIF8 2168 aaKnown RBP10.75□□□□□ -0.69
HMGN1-201ENST00000288344 LCTP09848 1927 aa10.75□□□□□ -0.69
HMGN1-201ENST00000288344 RPTORQ8N122 1335 aa10.74□□□□□ -0.69
HMGN1-201ENST00000288344 CYTH3O43739 400 aa10.74□□□□□ -0.69
HMGN1-201ENST00000288344 ZBED4O75132 1171 aa10.74□□□□□ -0.69
HMGN1-201ENST00000288344 SGPL1O95470 568 aa10.74□□□□□ -0.69
HMGN1-201ENST00000288344 ICAM1P05362 532 aa10.74□□□□□ -0.69
HMGN1-201ENST00000288344 COPB2P35606 906 aa10.74□□□□□ -0.69
HMGN1-201ENST00000288344 SNAP25P60880 206 aa10.74□□□□□ -0.69
HMGN1-201ENST00000288344 GPATCH4Q5T3I0 446 aaKnown RBP10.74□□□□□ -0.69
HMGN1-201ENST00000288344 SYDE2Q5VT97 1194 aa10.74□□□□□ -0.69
HMGN1-201ENST00000288344 SNRNP48Q6IEG0 339 aaKnown RBP10.74□□□□□ -0.69
HMGN1-201ENST00000288344 KIAA1211Q6ZU35 1233 aa10.74□□□□□ -0.69
HMGN1-201ENST00000288344 NCAPG2Q86XI2 1143 aa10.74□□□□□ -0.69
HMGN1-201ENST00000288344 TRMT44Q8IYL2 757 aaKnown RBP10.74□□□□□ -0.69
HMGN1-201ENST00000288344 FBXL16Q8N461 479 aa10.74□□□□□ -0.69
HMGN1-201ENST00000288344 FAM133AQ8N9E0 248 aa10.74□□□□□ -0.69
HMGN1-201ENST00000288344 CHST13Q8NET6 341 aa10.74□□□□□ -0.69
HMGN1-201ENST00000288344 IL17RAQ96F46 866 aa10.74□□□□□ -0.69
HMGN1-201ENST00000288344 MAML3Q96JK9 1138 aa10.74□□□□□ -0.69
HMGN1-201ENST00000288344 MAP3K14Q99558 947 aa10.74□□□□□ -0.69
HMGN1-201ENST00000288344 USP26Q9BXU7 913 aa10.74□□□□□ -0.69
HMGN1-201ENST00000288344 KATNBL1Q9H079 304 aa10.74□□□□□ -0.69
HMGN1-201ENST00000288344 CPVLQ9H3G5 476 aa10.74□□□□□ -0.69
HMGN1-201ENST00000288344 RIOX1Q9H6W3 641 aa10.74□□□□□ -0.69
HMGN1-201ENST00000288344 ANO2Q9NQ90 1003 aa10.74□□□□□ -0.69
HMGN1-201ENST00000288344 FRMPD2Q68DX3 1309 aaPredicted RBP10.73□□□□□ -0.69
HMGN1-201ENST00000288344 PLXNA1Q9UIW2 1896 aa10.73□□□□□ -0.69
HMGN1-201ENST00000288344 RAD21O60216 631 aa10.73□□□□□ -0.69
HMGN1-201ENST00000288344 SNAI1O95863 264 aaPredicted RBP10.73□□□□□ -0.69
HMGN1-201ENST00000288344 GOLGA8HP0CJ92 632 aa10.73□□□□□ -0.69
HMGN1-201ENST00000288344 FCER1AP12319 257 aa10.73□□□□□ -0.69
HMGN1-201ENST00000288344 TAL1P17542 331 aaPredicted RBP10.73□□□□□ -0.69
HMGN1-201ENST00000288344 LIFRP42702 1097 aa10.73□□□□□ -0.69
HMGN1-201ENST00000288344 GHRHRQ02643 423 aa10.73□□□□□ -0.69
HMGN1-201ENST00000288344 TKFCQ3LXA3 575 aa10.73□□□□□ -0.69
HMGN1-201ENST00000288344 MUM1L1Q5H9M0 696 aa10.73□□□□□ -0.69
HMGN1-201ENST00000288344 SGMS1Q86VZ5 419 aa10.73□□□□□ -0.69
HMGN1-201ENST00000288344 CPXCR1Q8N123 301 aa10.73□□□□□ -0.69
HMGN1-201ENST00000288344 PTCD2Q8WV60 388 aaKnown RBP10.73□□□□□ -0.69
HMGN1-201ENST00000288344 CHMP4CQ96CF2 233 aa10.73□□□□□ -0.69
HMGN1-201ENST00000288344 AGXT2Q9BYV1 514 aa10.73□□□□□ -0.69
HMGN1-201ENST00000288344 UBA5Q9GZZ9 404 aa10.73□□□□□ -0.69
HMGN1-201ENST00000288344 JMJD4Q9H9V9 463 aa10.73□□□□□ -0.69
HMGN1-201ENST00000288344 GPCPD1Q9NPB8 672 aa10.73□□□□□ -0.69
HMGN1-201ENST00000288344 A1CFQ9NQ94 594 aaKnown RBP10.73□□□□□ -0.69
HMGN1-201ENST00000288344 OGDHLQ9ULD0 1010 aa10.73□□□□□ -0.69
HMGN1-201ENST00000288344 WDR19Q8NEZ3 1342 aa10.72□□□□□ -0.69
HMGN1-201ENST00000288344 SOWAHBA6NEL2 793 aa10.72□□□□□ -0.69
HMGN1-201ENST00000288344 SH2B2O14492 632 aaPredicted RBP10.72□□□□□ -0.69
HMGN1-201ENST00000288344 OPLAHO14841 1288 aa10.72□□□□□ -0.69
HMGN1-201ENST00000288344 IFIT3O14879 490 aaKnown RBP10.72□□□□□ -0.69
HMGN1-201ENST00000288344 TRIM66O15016 1216 aa10.72□□□□□ -0.69
HMGN1-201ENST00000288344 PPP1R11O60927 126 aaPredicted RBP10.72□□□□□ -0.69
HMGN1-201ENST00000288344 PGK2P07205 417 aa10.72□□□□□ -0.69
HMGN1-201ENST00000288344 CYBAP13498 195 aa10.72□□□□□ -0.69
HMGN1-201ENST00000288344 CAPN2P17655 700 aa10.72□□□□□ -0.69
HMGN1-201ENST00000288344 CCND3P30281 292 aaPredicted RBP10.72□□□□□ -0.69
HMGN1-201ENST00000288344 TRDNQ13061 729 aa10.72□□□□□ -0.69
HMGN1-201ENST00000288344 PLS1Q14651 629 aa10.72□□□□□ -0.69
HMGN1-201ENST00000288344 GRM4Q14833 912 aa10.72□□□□□ -0.69
HMGN1-201ENST00000288344 ASPRV1Q53RT3 343 aa10.72□□□□□ -0.69
HMGN1-201ENST00000288344 IFIT1BQ5T764 474 aaKnown RBP10.72□□□□□ -0.69
HMGN1-201ENST00000288344 ADGRF4Q8IZF3 695 aa10.72□□□□□ -0.69
HMGN1-201ENST00000288344 KRI1Q8N9T8 703 aaKnown RBP10.72□□□□□ -0.69
HMGN1-201ENST00000288344 RGS22Q8NE09 1264 aa10.72□□□□□ -0.69
HMGN1-201ENST00000288344 MORC4Q8TE76 937 aa10.72□□□□□ -0.69
HMGN1-201ENST00000288344 U2AF1L4Q8WU68 220 aaKnown RBP10.72□□□□□ -0.69
HMGN1-201ENST00000288344 DDX12PQ92771 950 aa10.72□□□□□ -0.69
HMGN1-201ENST00000288344 TMEM87BQ96K49 555 aa10.72□□□□□ -0.69
HMGN1-201ENST00000288344 UBAC1Q9BSL1 405 aa10.72□□□□□ -0.69
HMGN1-201ENST00000288344 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.72□□□□□ -0.694e-10■■■■□ 24
HMGN1-201ENST00000288344 RNF208Q9H0X6 261 aa10.72□□□□□ -0.69
HMGN1-201ENST00000288344 SNX14Q9Y5W7 946 aa10.72□□□□□ -0.69
HMGN1-201ENST00000288344 PRC1O43663 620 aa10.71□□□□□ -0.69
HMGN1-201ENST00000288344 EVI5O60447 810 aa10.71□□□□□ -0.69
HMGN1-201ENST00000288344 ZNF865P0CJ78 1059 aaPredicted RBP10.71□□□□□ -0.69
HMGN1-201ENST00000288344 SMARCA1P28370 1054 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 241.8 ms