RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 ZNF213O14771 459 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 TEX33O43247 280 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 PRDM1O75626 825 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 TFRCP02786 760 aaKnown RBP11.76□□□□□ -0.53
ERCC3-201ENST00000285398 FECHP22830 423 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 BTDP43251 543 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 PLCD1P51178 756 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 TRDNQ13061 729 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 NCAPH2Q6IBW4 605 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 KANK3Q6NY19 840 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 KCNV1Q6PIU1 500 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 PODNQ7Z5L7 613 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 PRPF38AQ8NAV1 312 aaKnown RBP11.76□□□□□ -0.53
ERCC3-201ENST00000285398 TGFBRAP1Q8WUH2 860 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 CAPS2Q9BXY5 557 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 ATXN2Q99700 1313 aaKnown RBP11.76□□□□□ -0.53
ERCC3-201ENST00000285398 DOCK2Q92608 1830 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 CDKL5O76039 1030 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 SLURP2P0DP57 97 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 RRP12Q5JTH9 1297 aaKnown RBP11.76□□□□□ -0.53
ERCC3-201ENST00000285398 SPTY2D1Q68D10 685 aaPredicted RBP11.76□□□□□ -0.53
ERCC3-201ENST00000285398 B4GALNT4Q76KP1 1039 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 RALYLQ86SE5 291 aaKnown RBP11.76□□□□□ -0.53
ERCC3-201ENST00000285398 MAPKAPK5Q8IW41 473 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 STAG1Q8WVM7 1258 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 CABS1Q96KC9 395 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 MED15Q96RN5 788 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 PLCD4Q9BRC7 762 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 TAOK3Q9H2K8 898 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 SAP30BPQ9UHR5 308 aaKnown RBP11.76□□□□□ -0.53
ERCC3-201ENST00000285398 SCAF8Q9UPN6 1271 aaKnown RBP11.76□□□□□ -0.53
ERCC3-201ENST00000285398 ZC3H4Q9UPT8 1303 aaKnown RBP11.76□□□□□ -0.53
ERCC3-201ENST00000285398 DLEC1Q9Y238 1755 aa11.76□□□□□ -0.53
ERCC3-201ENST00000285398 EIF3HO15372 352 aaKnown RBP eCLIP11.75□□□□□ -0.53
ERCC3-201ENST00000285398 PRR29P0C7W0 189 aa11.75□□□□□ -0.53
ERCC3-201ENST00000285398 CASP14P31944 242 aa11.75□□□□□ -0.53
ERCC3-201ENST00000285398 PBX1P40424 430 aa11.75□□□□□ -0.53
ERCC3-201ENST00000285398 RBM5P52756 815 aaKnown RBP eCLIP11.75□□□□□ -0.53
ERCC3-201ENST00000285398 DACT2Q5SW24 774 aa11.75□□□□□ -0.53
ERCC3-201ENST00000285398 APTXQ7Z2E3 356 aaKnown RBP11.75□□□□□ -0.53
ERCC3-201ENST00000285398 SPATS2Q86XZ4 545 aaKnown RBP11.75□□□□□ -0.53
ERCC3-201ENST00000285398 ACRBPQ8NEB7 543 aa11.75□□□□□ -0.53
ERCC3-201ENST00000285398 PRDM16Q9HAZ2 1276 aa11.75□□□□□ -0.53
ERCC3-201ENST00000285398 PDS5AQ29RF7 1337 aaKnown RBP11.75□□□□□ -0.53
ERCC3-201ENST00000285398 FAM205AQ6ZU69 1335 aa11.75□□□□□ -0.53
ERCC3-201ENST00000285398 GOLGA6BA6NDN3 693 aa11.75□□□□□ -0.53
ERCC3-201ENST00000285398 USP17L12C9JPN9 530 aa11.75□□□□□ -0.53
ERCC3-201ENST00000285398 USP17L21D6R901 530 aa11.75□□□□□ -0.53
ERCC3-201ENST00000285398 MYCNP04198 464 aaPredicted RBP11.75□□□□□ -0.53
ERCC3-201ENST00000285398 USP17L8P0C7I0 530 aa11.75□□□□□ -0.53
ERCC3-201ENST00000285398 PICALMQ13492 652 aa11.75□□□□□ -0.53
ERCC3-201ENST00000285398 SPATA1Q5VX52 437 aa11.75□□□□□ -0.53
ERCC3-201ENST00000285398 CC2D2BQ6DHV5 1058 aa11.75□□□□□ -0.53
ERCC3-201ENST00000285398 CPLX2Q6PUV4 134 aaKnown RBP11.75□□□□□ -0.53
ERCC3-201ENST00000285398 CYP26C1Q6V0L0 522 aa11.75□□□□□ -0.53
ERCC3-201ENST00000285398 TRAPPC11Q7Z392 1133 aa11.75□□□□□ -0.53
ERCC3-201ENST00000285398 RIN2Q8WYP3 895 aaPredicted RBP11.75□□□□□ -0.53
ERCC3-201ENST00000285398 SYT17Q9BSW7 474 aa11.75□□□□□ -0.53
ERCC3-201ENST00000285398 ADD3Q9UEY8 706 aaKnown RBP11.75□□□□□ -0.53
ERCC3-201ENST00000285398 DAGLAQ9Y4D2 1042 aa11.75□□□□□ -0.53
ERCC3-201ENST00000285398 ITIH6Q6UXX5 1313 aa11.75□□□□□ -0.53
ERCC3-201ENST00000285398 USP17L3A6NCW0 530 aa11.74□□□□□ -0.53
ERCC3-201ENST00000285398 USP17L4A6NCW7 530 aa11.74□□□□□ -0.53
ERCC3-201ENST00000285398 H0YHG0 523 aa11.74□□□□□ -0.53
ERCC3-201ENST00000285398 PSMD14O00487 310 aa11.74□□□□□ -0.53
ERCC3-201ENST00000285398 KIAA0754O94854 1291 aa11.74□□□□□ -0.53
ERCC3-201ENST00000285398 ARHGAP25P42331 645 aa11.74□□□□□ -0.53
ERCC3-201ENST00000285398 CKAP4Q07065 602 aaKnown RBP11.74□□□□□ -0.53
ERCC3-201ENST00000285398 TRIM29Q14134 588 aa11.74□□□□□ -0.53
ERCC3-201ENST00000285398 USP17L1Q7RTZ2 530 aa11.74□□□□□ -0.53
ERCC3-201ENST00000285398 B4E1Z4 1266 aa11.74□□□□□ -0.53
ERCC3-201ENST00000285398 METAP2P50579 478 aaKnown RBP eCLIP11.74□□□□□ -0.53
ERCC3-201ENST00000285398 GIMAP7Q8NHV1 300 aa11.74□□□□□ -0.53
ERCC3-201ENST00000285398 TBC1D22AQ8WUA7 517 aa11.74□□□□□ -0.53
ERCC3-201ENST00000285398 PSMD1Q99460 953 aa11.74□□□□□ -0.53
ERCC3-201ENST00000285398 DCP1AQ9NPI6 582 aaPredicted RBP11.74□□□□□ -0.53
ERCC3-201ENST00000285398 MCM9Q9NXL9 1143 aa11.74□□□□□ -0.53
ERCC3-201ENST00000285398 GOLGA8KD6RF30 607 aa11.73□□□□□ -0.53
ERCC3-201ENST00000285398 AGPSO00116 658 aa11.73□□□□□ -0.53
ERCC3-201ENST00000285398 IARSP41252 1262 aaKnown RBP11.73□□□□□ -0.53
ERCC3-201ENST00000285398 CCDC70Q6NSX1 233 aa11.73□□□□□ -0.53
ERCC3-201ENST00000285398 ARHGAP27Q6ZUM4 889 aa11.73□□□□□ -0.53
ERCC3-201ENST00000285398 ZKSCAN3Q9BRR0 538 aa11.73□□□□□ -0.53
ERCC3-201ENST00000285398 SELENOOQ9BVL4 669 aa11.73□□□□□ -0.53
ERCC3-201ENST00000285398 ANGEL1Q9UNK9 670 aaKnown RBP11.73□□□□□ -0.53
ERCC3-201ENST00000285398 SAR1BQ9Y6B6 198 aa11.73□□□□□ -0.53
ERCC3-201ENST00000285398 CAPN7Q9Y6W3 813 aa11.73□□□□□ -0.53
ERCC3-201ENST00000285398 POLR2DO15514 142 aaKnown RBP11.73□□□□□ -0.53
ERCC3-201ENST00000285398 GYPCP04921 128 aa11.73□□□□□ -0.53
ERCC3-201ENST00000285398 RDXP35241 583 aaKnown RBP11.73□□□□□ -0.53
ERCC3-201ENST00000285398 STRIP1Q5VSL9 837 aa11.73□□□□□ -0.53
ERCC3-201ENST00000285398 OTUD6BQ8N6M0 293 aa11.73□□□□□ -0.53
ERCC3-201ENST00000285398 SPATA20Q8TB22 786 aa11.73□□□□□ -0.53
ERCC3-201ENST00000285398 JPH2Q9BR39 696 aaPredicted RBP11.73□□□□□ -0.53
ERCC3-201ENST00000285398 NACAP1Q9BZK3 213 aa11.73□□□□□ -0.53
ERCC3-201ENST00000285398 ABHD10Q9NUJ1 306 aa11.73□□□□□ -0.53
ERCC3-201ENST00000285398 FXR1P51114 621 aaKnown RBP eCLIP11.73□□□□□ -0.53
ERCC3-201ENST00000285398 GNGT1P63211 74 aa11.73□□□□□ -0.53
ERCC3-201ENST00000285398 TRIM14Q14142 442 aa11.73□□□□□ -0.53
ERCC3-201ENST00000285398 AMOTL1Q8IY63 956 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms