RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 USP14P54578 494 aa17.33■□□□□ 0.36
USP43-201ENST00000285199 LY9Q9HBG7 655 aa17.33■□□□□ 0.36
USP43-201ENST00000285199 ASIC3Q9UHC3 531 aa17.33■□□□□ 0.36
USP43-201ENST00000285199 CDC42BPBQ9Y5S2 1711 aa17.33■□□□□ 0.36
USP43-201ENST00000285199 FAM133AQ8N9E0 248 aa17.32■□□□□ 0.36
USP43-201ENST00000285199 P2RX5Q93086 422 aa17.32■□□□□ 0.36
USP43-201ENST00000285199 RNF26Q9BY78 433 aaPredicted RBP17.32■□□□□ 0.36
USP43-201ENST00000285199 CEP83Q9Y592 693 aa17.32■□□□□ 0.36
USP43-201ENST00000285199 CTNND1O60716 968 aaKnown RBP17.32■□□□□ 0.36
USP43-201ENST00000285199 LACTBP83111 547 aaPredicted RBP17.32■□□□□ 0.36
USP43-201ENST00000285199 RPAINQ86UA6 219 aa17.32■□□□□ 0.36
USP43-201ENST00000285199 FOXP4Q8IVH2 680 aaPredicted RBP17.32■□□□□ 0.36
USP43-201ENST00000285199 THOC1Q96FV9 657 aaKnown RBP17.32■□□□□ 0.36
USP43-201ENST00000285199 PCDHA13Q9Y5I0 950 aa17.32■□□□□ 0.36
USP43-201ENST00000285199 EFCAB6Q5THR3 1501 aa17.32■□□□□ 0.36
USP43-201ENST00000285199 RIMBP2O15034 1052 aa17.32■□□□□ 0.36
USP43-201ENST00000285199 FAM13AO94988 1023 aa17.32■□□□□ 0.36
USP43-201ENST00000285199 UAP1Q16222 522 aaPredicted RBP17.32■□□□□ 0.36
USP43-201ENST00000285199 TRIM65Q6PJ69 517 aa17.32■□□□□ 0.36
USP43-201ENST00000285199 ATG9AQ7Z3C6 839 aa17.32■□□□□ 0.36
USP43-201ENST00000285199 REXO1Q8N1G1 1221 aaKnown RBP17.32■□□□□ 0.36
USP43-201ENST00000285199 MS4A14Q96JA4 679 aa17.32■□□□□ 0.36
USP43-201ENST00000285199 RWDD2AQ9UIY3 292 aa17.32■□□□□ 0.36
USP43-201ENST00000285199 DUSP10Q9Y6W6 482 aa17.32■□□□□ 0.36
USP43-201ENST00000285199 RNF17Q9BXT8 1623 aaKnown RBP17.32■□□□□ 0.36
USP43-201ENST00000285199 KLRF2D3W0D1 207 aa17.32■□□□□ 0.36
USP43-201ENST00000285199 H7C1W4 665 aa17.32■□□□□ 0.36
USP43-201ENST00000285199 HIBADHP31937 336 aaKnown RBP17.32■□□□□ 0.36
USP43-201ENST00000285199 KCNQ4P56696 695 aa17.32■□□□□ 0.36
USP43-201ENST00000285199 MXRA7P84157 204 aa17.32■□□□□ 0.36
USP43-201ENST00000285199 TUBE1Q9UJT0 475 aa17.32■□□□□ 0.36
USP43-201ENST00000285199 LRRIQ3A6PVS8 624 aaPredicted RBP17.31■□□□□ 0.36
USP43-201ENST00000285199 CYP27B1O15528 508 aa17.31■□□□□ 0.36
USP43-201ENST00000285199 ZBED6P86452 979 aa17.31■□□□□ 0.36
USP43-201ENST00000285199 HS2ST1Q7LGA3 356 aa17.31■□□□□ 0.36
USP43-201ENST00000285199 VEZTQ9HBM0 779 aa17.31■□□□□ 0.36
USP43-201ENST00000285199 DNAJC17Q9NVM6 304 aaKnown RBP17.31■□□□□ 0.36
USP43-201ENST00000285199 GYPCP04921 128 aa17.31■□□□□ 0.36
USP43-201ENST00000285199 PLCG1P19174 1290 aa17.31■□□□□ 0.36
USP43-201ENST00000285199 SEC24CP53992 1094 aa17.31■□□□□ 0.36
USP43-201ENST00000285199 SESN3P58005 492 aa17.31■□□□□ 0.36
USP43-201ENST00000285199 KCTD19Q17RG1 926 aaPredicted RBP17.31■□□□□ 0.36
USP43-201ENST00000285199 BEND6Q5SZJ8 279 aaPredicted RBP17.31■□□□□ 0.36
USP43-201ENST00000285199 INTS8Q75QN2 995 aaKnown RBP17.31■□□□□ 0.36
USP43-201ENST00000285199 STIM2Q9P246 746 aa17.31■□□□□ 0.36
USP43-201ENST00000285199 TET3O43151 1660 aa17.31■□□□□ 0.36
USP43-201ENST00000285199 PLTPP55058 493 aa17.31■□□□□ 0.36
USP43-201ENST00000285199 GFPT1Q06210 699 aaPredicted RBP17.31■□□□□ 0.36
USP43-201ENST00000285199 GPR108Q9NPR9 543 aa17.31■□□□□ 0.36
USP43-201ENST00000285199 ZBTB1Q9Y2K1 713 aa17.31■□□□□ 0.36
USP43-201ENST00000285199 PTPN22Q9Y2R2 807 aa17.31■□□□□ 0.36
USP43-201ENST00000285199 LAMC1P11047 1609 aa17.3■□□□□ 0.36
USP43-201ENST00000285199 SPHKAPQ2M3C7 1700 aa17.3■□□□□ 0.36
USP43-201ENST00000285199 PCCAP05165 728 aaPredicted RBP17.3■□□□□ 0.36
USP43-201ENST00000285199 LIFRP42702 1097 aa17.3■□□□□ 0.36
USP43-201ENST00000285199 DHX9Q08211 1270 aaKnown RBP17.3■□□□□ 0.36
USP43-201ENST00000285199 HLFQ16534 295 aa17.3■□□□□ 0.36
USP43-201ENST00000285199 TBC1D10BQ4KMP7 808 aaPredicted RBP17.3■□□□□ 0.36
USP43-201ENST00000285199 TAB3Q8N5C8 712 aaPredicted RBP17.3■□□□□ 0.36
USP43-201ENST00000285199 CUL5Q93034 780 aa17.3■□□□□ 0.36
USP43-201ENST00000285199 PCDH11XQ9BZA7 1347 aa17.3■□□□□ 0.36
USP43-201ENST00000285199 PCDH11YQ9BZA8 1340 aa17.3■□□□□ 0.36
USP43-201ENST00000285199 OR52Z1P0C646 297 aa17.3■□□□□ 0.36
USP43-201ENST00000285199 CYP4A11Q02928 519 aa17.3■□□□□ 0.36
USP43-201ENST00000285199 NR1I3Q14994 352 aa17.3■□□□□ 0.36
USP43-201ENST00000285199 SNCBQ16143 134 aa17.3■□□□□ 0.36
USP43-201ENST00000285199 TBC1D1Q86TI0 1168 aaPredicted RBP17.3■□□□□ 0.36
USP43-201ENST00000285199 MYOCDQ8IZQ8 938 aa17.3■□□□□ 0.36
USP43-201ENST00000285199 TTLL11Q8NHH1 800 aa17.3■□□□□ 0.36
USP43-201ENST00000285199 ERMNQ8TAM6 284 aa17.3■□□□□ 0.36
USP43-201ENST00000285199 GJA10Q969M2 543 aa17.3■□□□□ 0.36
USP43-201ENST00000285199 SETDB2Q96T68 719 aa17.3■□□□□ 0.36
USP43-201ENST00000285199 MLXIPLQ9NP71 852 aa17.3■□□□□ 0.36
USP43-201ENST00000285199 FBXO2Q9UK22 296 aaPredicted RBP17.3■□□□□ 0.36
USP43-201ENST00000285199 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.3■□□□□ 0.36
USP43-201ENST00000285199 HPS5Q9UPZ3 1129 aa17.3■□□□□ 0.36
USP43-201ENST00000285199 USP42Q9H9J4 1324 aaKnown RBP17.3■□□□□ 0.36
USP43-201ENST00000285199 CCDC160A6NGH7 325 aa17.3■□□□□ 0.36
USP43-201ENST00000285199 DENND2CQ68D51 928 aa17.3■□□□□ 0.36
USP43-201ENST00000285199 DYNLL2Q96FJ2 89 aa17.3■□□□□ 0.36
USP43-201ENST00000285199 ALDH8A1Q9H2A2 487 aaPredicted RBP17.3■□□□□ 0.36
USP43-201ENST00000285199 KLK7P49862 253 aa17.29■□□□□ 0.36
USP43-201ENST00000285199 SP4Q02446 784 aa17.29■□□□□ 0.36
USP43-201ENST00000285199 EHD4Q9H223 541 aa17.29■□□□□ 0.36
USP43-201ENST00000285199 NKIRAS1Q9NYS0 192 aa17.29■□□□□ 0.36
USP43-201ENST00000285199 ADD3Q9UEY8 706 aaKnown RBP17.29■□□□□ 0.36
USP43-201ENST00000285199 GGT7Q9UJ14 662 aa17.29■□□□□ 0.36
USP43-201ENST00000285199 CPS1P31327 1500 aa17.29■□□□□ 0.36
USP43-201ENST00000285199 ACTN4O43707 911 aaKnown RBP17.29■□□□□ 0.36
USP43-201ENST00000285199 GCNT3O95395 438 aa17.29■□□□□ 0.36
USP43-201ENST00000285199 EEF1GP26641 437 aaKnown RBP17.29■□□□□ 0.36
USP43-201ENST00000285199 TCHHQ07283 1943 aa17.29■□□□□ 0.36
USP43-201ENST00000285199 ILDR1Q86SU0 546 aaPredicted RBP17.29■□□□□ 0.36
USP43-201ENST00000285199 KLHL34Q8N239 644 aa17.29■□□□□ 0.36
USP43-201ENST00000285199 FLOT1O75955 427 aa17.29■□□□□ 0.36
USP43-201ENST00000285199 CHRNDQ07001 517 aa17.29■□□□□ 0.36
USP43-201ENST00000285199 ADAM9Q13443 819 aa17.29■□□□□ 0.36
USP43-201ENST00000285199 A0A1B0GTH6 734 aa17.28■□□□□ 0.36
USP43-201ENST00000285199 MYO1FO00160 1098 aa17.28■□□□□ 0.36
USP43-201ENST00000285199 OTUD6AQ7L8S5 288 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms