RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 SNRPB2P08579 225 aaKnown RBP3.22□□□□□ -1.89
CHD1-201ENST00000284049 PABPC1P11940 636 aaKnown RBP3.22□□□□□ -1.89
CHD1-201ENST00000284049 ITGA4P13612 1032 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 GRIA4P48058 902 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 SIK1P57059 783 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 LSM11P83369 360 aaKnown RBP eCLIP3.22□□□□□ -1.89
CHD1-201ENST00000284049 GTF2H3Q13889 308 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 UNC5AQ6ZN44 842 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 C2orf69Q8N8R5 385 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 ZNF512BQ96KM6 892 aaPredicted RBP3.22□□□□□ -1.89
CHD1-201ENST00000284049 CCDC74BQ96LY2 380 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 MENTQ9BUN1 341 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 CSADQ9Y600 493 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 ATP10BO94823 1461 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 EXOC5O00471 708 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 ZIC2O95409 532 aaPredicted RBP3.22□□□□□ -1.89
CHD1-201ENST00000284049 SRGAP2CP0DJJ0 459 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 TECP42680 631 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 RPS26P11Q5JNZ5 115 aaPredicted RBP3.22□□□□□ -1.89
CHD1-201ENST00000284049 MRM1Q6IN84 353 aaKnown RBP3.22□□□□□ -1.89
CHD1-201ENST00000284049 GDF6Q6KF10 455 aaPredicted RBP3.22□□□□□ -1.89
CHD1-201ENST00000284049 PGBD2Q6P3X8 592 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 CASC1Q6TDU7 716 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 WDR48Q8TAF3 677 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 LRRC3Q9BY71 257 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 FAM126AQ9BYI3 521 aaPredicted RBP3.22□□□□□ -1.89
CHD1-201ENST00000284049 RUBCNLQ9H714 662 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 C11orf16Q9NQ32 467 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 TTLL3Q9Y4R7 772 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 ERCC6L2Q5T890 1561 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 KDM6BO15054 1643 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 RHPN2P1A8MT19 583 aa3.21□□□□□ -1.89
CHD1-201ENST00000284049 ASLP04424 464 aa3.21□□□□□ -1.89
CHD1-201ENST00000284049 ARNTP27540 789 aa3.21□□□□□ -1.89
CHD1-201ENST00000284049 CLIP1P30622 1438 aa3.21□□□□□ -1.89
CHD1-201ENST00000284049 SEPHS1P49903 392 aa3.21□□□□□ -1.89
CHD1-201ENST00000284049 DNM2P50570 870 aa3.21□□□□□ -1.89
CHD1-201ENST00000284049 PCBP1Q15365 356 aaKnown RBP eCLIP3.21□□□□□ -1.89
CHD1-201ENST00000284049 UVSSAQ2YD98 709 aa3.21□□□□□ -1.89
CHD1-201ENST00000284049 ZKSCAN2Q63HK3 967 aa3.21□□□□□ -1.89
CHD1-201ENST00000284049 RNF180Q86T96 592 aa3.21□□□□□ -1.89
CHD1-201ENST00000284049 ZNF527Q8NB42 609 aa3.21□□□□□ -1.89
CHD1-201ENST00000284049 CASS4Q9NQ75 786 aa3.21□□□□□ -1.89
CHD1-201ENST00000284049 PHTF1Q9UMS5 762 aa3.21□□□□□ -1.89
CHD1-201ENST00000284049 AKT3Q9Y243 479 aa3.21□□□□□ -1.89
CHD1-201ENST00000284049 MROH2AA6NES4 1674 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 ABCC1P33527 1531 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 GPR39O43194 453 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 KRT20P35900 424 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 ATP6V1E1P36543 226 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 SCARF1Q14162 830 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 TMEM95Q3KNT9 176 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 XKR5Q6UX68 686 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 KIAA1211Q6ZU35 1233 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 XAGE3Q8WTP9 111 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 BSNDQ8WZ55 320 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 KCNMB2Q9Y691 235 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 CDC42BPAQ5VT25 1732 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 RFPL3O75679 317 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 IFIT1P09914 478 aaKnown RBP3.21□□□□□ -1.9
CHD1-201ENST00000284049 POLD1P28340 1107 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 CLNS1AP54105 237 aaKnown RBP3.21□□□□□ -1.9
CHD1-201ENST00000284049 HMGN5P82970 282 aaKnown RBP3.21□□□□□ -1.9
CHD1-201ENST00000284049 OVOS1Q6IE37 1185 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 RASSF3Q86WH2 238 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 BOCQ9BWV1 1114 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 ANO9A1A5B4 782 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 B4DLN1 442 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 ADCY3O60266 1144 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 ZKSCAN1P17029 563 aaPredicted RBP3.21□□□□□ -1.9
CHD1-201ENST00000284049 CASP7P55210 303 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 KCNC4Q03721 635 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 CLEC16AQ2KHT3 1053 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 LYSMD3Q7Z3D4 306 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 CCDC91Q7Z6B0 441 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 CISD2Q8N5K1 135 aaKnown RBP3.21□□□□□ -1.9
CHD1-201ENST00000284049 ZNF669Q96BR6 464 aaPredicted RBP3.21□□□□□ -1.9
CHD1-201ENST00000284049 EXOC2Q96KP1 924 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 SEC62Q99442 399 aaKnown RBP3.21□□□□□ -1.9
CHD1-201ENST00000284049 RNF112Q9ULX5 631 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 SIK3Q9Y2K2 1263 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 TRAF6Q9Y4K3 522 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 ROCK1Q13464 1354 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 ENC1O14682 589 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 GABRDO14764 452 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 CRTAMO95727 393 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 SLC5A1P13866 664 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 NME2P22392 152 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 ADD2P35612 726 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 IGFALSP35858 605 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 SESN3P58005 492 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 TNFAIP2Q03169 654 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 PSMD6Q15008 389 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 POU4F3Q15319 338 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 ANKRD18AQ8IVF6 992 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 NSUN6Q8TEA1 469 aaKnown RBP3.21□□□□□ -1.9
CHD1-201ENST00000284049 CERS4Q9HA82 394 aa3.21□□□□□ -1.9
CHD1-201ENST00000284049 KLHL33A6NCF5 533 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 MYO1BO43795 1136 aa3.2□□□□□ -1.9
CHD1-201ENST00000284049 OFD1O75665 1012 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms