RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 PRR12Q9ULL5 1215 aa12.5□□□□□ -0.41
GGPS1-201ENST00000282841 GREB1LQ9C091 1923 aaPredicted RBP12.5□□□□□ -0.41
GGPS1-201ENST00000282841 EDIL3O43854 480 aa12.49□□□□□ -0.41
GGPS1-201ENST00000282841 ZNF165P49910 485 aa12.49□□□□□ -0.41
GGPS1-201ENST00000282841 SYDE2Q5VT97 1194 aa12.49□□□□□ -0.41
GGPS1-201ENST00000282841 POTEDQ86YR6 584 aa12.49□□□□□ -0.41
GGPS1-201ENST00000282841 ZHX1Q9UKY1 873 aaPredicted RBP12.49□□□□□ -0.41
GGPS1-201ENST00000282841 CEP131Q9UPN4 1083 aa12.49□□□□□ -0.41
GGPS1-201ENST00000282841 SLC37A4O43826 429 aa12.49□□□□□ -0.41
GGPS1-201ENST00000282841 GNA11P29992 359 aa12.49□□□□□ -0.41
GGPS1-201ENST00000282841 UBXN2AP68543 259 aa12.49□□□□□ -0.41
GGPS1-201ENST00000282841 ATP2C1P98194 919 aaPredicted RBP12.49□□□□□ -0.41
GGPS1-201ENST00000282841 NONOQ15233 471 aaKnown RBP eCLIP12.49□□□□□ -0.41
GGPS1-201ENST00000282841 HSP90AA4PQ58FG1 418 aa12.49□□□□□ -0.41
GGPS1-201ENST00000282841 SLC30A10Q6XR72 485 aa12.49□□□□□ -0.41
GGPS1-201ENST00000282841 RBM43Q6ZSC3 357 aaKnown RBP12.49□□□□□ -0.41
GGPS1-201ENST00000282841 C4orf32Q8N8J7 132 aa12.49□□□□□ -0.41
GGPS1-201ENST00000282841 DCAF4Q8WV16 495 aa12.49□□□□□ -0.41
GGPS1-201ENST00000282841 WRNIP1Q96S55 665 aa12.49□□□□□ -0.41
GGPS1-201ENST00000282841 KIAA1468Q9P260 1216 aa12.49□□□□□ -0.41
GGPS1-201ENST00000282841 BCCIPQ9P287 314 aaKnown RBP eCLIP12.49□□□□□ -0.41
GGPS1-201ENST00000282841 TMX2Q9Y320 296 aa12.49□□□□□ -0.41
GGPS1-201ENST00000282841 ADM5C9JUS6 153 aa12.48□□□□□ -0.41
GGPS1-201ENST00000282841 KARSQ15046 597 aaKnown RBP12.48□□□□□ -0.41
GGPS1-201ENST00000282841 FKBP1CQ5VVH2 108 aa12.48□□□□□ -0.41
GGPS1-201ENST00000282841 COBLO75128 1261 aa12.48□□□□□ -0.41
GGPS1-201ENST00000282841 TXKP42681 527 aa12.48□□□□□ -0.41
GGPS1-201ENST00000282841 SPP2Q13103 211 aa12.48□□□□□ -0.41
GGPS1-201ENST00000282841 MTMR2Q13614 643 aa12.48□□□□□ -0.41
GGPS1-201ENST00000282841 KRBA2Q6ZNG9 492 aa12.48□□□□□ -0.41
GGPS1-201ENST00000282841 FCHSD1Q86WN1 690 aa12.48□□□□□ -0.41
GGPS1-201ENST00000282841 CPXCR1Q8N123 301 aa12.48□□□□□ -0.41
GGPS1-201ENST00000282841 GPC2Q8N158 579 aa12.48□□□□□ -0.41
GGPS1-201ENST00000282841 BLZF1Q9H2G9 400 aa12.48□□□□□ -0.41
GGPS1-201ENST00000282841 FAM13BQ9NYF5 915 aa12.48□□□□□ -0.41
GGPS1-201ENST00000282841 TECP42680 631 aa12.48□□□□□ -0.41
GGPS1-201ENST00000282841 STAT2P52630 851 aa12.48□□□□□ -0.41
GGPS1-201ENST00000282841 TNFAIP1Q13829 316 aa12.48□□□□□ -0.41
GGPS1-201ENST00000282841 GPR162Q16538 588 aa12.48□□□□□ -0.41
GGPS1-201ENST00000282841 MOB2Q70IA6 237 aa12.48□□□□□ -0.41
GGPS1-201ENST00000282841 GMCL1P1Q8NEA9 526 aa12.48□□□□□ -0.41
GGPS1-201ENST00000282841 CCDC12Q8WUD4 166 aaPredicted RBP12.48□□□□□ -0.41
GGPS1-201ENST00000282841 HOMER2Q9NSB8 354 aa12.48□□□□□ -0.41
GGPS1-201ENST00000282841 PCDHA5Q9Y5H7 936 aa12.48□□□□□ -0.41
GGPS1-201ENST00000282841 PEX10O60683 326 aa12.47□□□□□ -0.41
GGPS1-201ENST00000282841 ASNSP08243 561 aa12.47□□□□□ -0.41
GGPS1-201ENST00000282841 DHX8Q14562 1220 aaKnown RBP12.47□□□□□ -0.41
GGPS1-201ENST00000282841 NEK8Q86SG6 692 aa12.47□□□□□ -0.41
GGPS1-201ENST00000282841 RASSF8Q8NHQ8 419 aa12.47□□□□□ -0.41
GGPS1-201ENST00000282841 ANP32BQ92688 251 aaKnown RBP12.47□□□□□ -0.41
GGPS1-201ENST00000282841 GMCL1Q96IK5 515 aa12.47□□□□□ -0.41
GGPS1-201ENST00000282841 FBXO11Q86XK2 927 aa12.47□□□□□ -0.41
GGPS1-201ENST00000282841 DAGLBQ8NCG7 672 aa12.47□□□□□ -0.41
GGPS1-201ENST00000282841 RGS22Q8NE09 1264 aa12.47□□□□□ -0.41
GGPS1-201ENST00000282841 ADCY5O95622 1261 aa12.46□□□□□ -0.41
GGPS1-201ENST00000282841 SMARCA1P28370 1054 aa12.46□□□□□ -0.41
GGPS1-201ENST00000282841 SPC24Q8NBT2 197 aa12.46□□□□□ -0.41
GGPS1-201ENST00000282841 FAM200AQ8TCP9 573 aa12.46□□□□□ -0.41
GGPS1-201ENST00000282841 CUL5Q93034 780 aa12.46□□□□□ -0.41
GGPS1-201ENST00000282841 MTMR8Q96EF0 704 aa12.46□□□□□ -0.41
GGPS1-201ENST00000282841 WNK4Q96J92 1243 aa12.46□□□□□ -0.41
GGPS1-201ENST00000282841 AGBL1Q96MI9 1066 aa12.46□□□□□ -0.41
GGPS1-201ENST00000282841 TANGO6Q9C0B7 1094 aa12.46□□□□□ -0.41
GGPS1-201ENST00000282841 VCPKMTQ9H867 229 aa12.46□□□□□ -0.41
GGPS1-201ENST00000282841 GOPCQ9HD26 462 aa12.46□□□□□ -0.41
GGPS1-201ENST00000282841 OPLAHO14841 1288 aa12.46□□□□□ -0.42
GGPS1-201ENST00000282841 TBC1D12O60347 775 aa12.46□□□□□ -0.42
GGPS1-201ENST00000282841 CFBP00751 764 aa12.46□□□□□ -0.42
GGPS1-201ENST00000282841 FMR1Q06787 632 aaKnown RBP eCLIP12.46□□□□□ -0.42
GGPS1-201ENST00000282841 PTPN21Q16825 1174 aa12.46□□□□□ -0.42
GGPS1-201ENST00000282841 KRT25Q7Z3Z0 450 aa12.46□□□□□ -0.42
GGPS1-201ENST00000282841 SMYD4Q8IYR2 804 aaPredicted RBP12.46□□□□□ -0.42
GGPS1-201ENST00000282841 AOPEPQ8N6M6 819 aa12.46□□□□□ -0.42
GGPS1-201ENST00000282841 LRRC15Q8TF66 581 aa12.46□□□□□ -0.42
GGPS1-201ENST00000282841 RIC8AQ9NPQ8 531 aa12.46□□□□□ -0.42
GGPS1-201ENST00000282841 ZHX2Q9Y6X8 837 aa12.46□□□□□ -0.42
GGPS1-201ENST00000282841 ACTN4O43707 911 aaKnown RBP12.45□□□□□ -0.42
GGPS1-201ENST00000282841 NEMFO60524 1076 aa12.45□□□□□ -0.42
GGPS1-201ENST00000282841 BMP6P22004 513 aa12.45□□□□□ -0.42
GGPS1-201ENST00000282841 DTHD1Q6ZMT9 781 aa12.45□□□□□ -0.42
GGPS1-201ENST00000282841 CYP2W1Q8TAV3 490 aa12.45□□□□□ -0.42
GGPS1-201ENST00000282841 AMNQ9BXJ7 453 aa12.45□□□□□ -0.42
GGPS1-201ENST00000282841 ARFGEF1Q9Y6D6 1849 aa12.45□□□□□ -0.42
GGPS1-201ENST00000282841 POTEMA6NI47 508 aa12.45□□□□□ -0.42
GGPS1-201ENST00000282841 MEIS2O14770 477 aa12.45□□□□□ -0.42
GGPS1-201ENST00000282841 CDK11BP21127 795 aaKnown RBP12.45□□□□□ -0.42
GGPS1-201ENST00000282841 STX1AQ16623 288 aa12.45□□□□□ -0.42
GGPS1-201ENST00000282841 EAPPQ56P03 285 aaPredicted RBP12.45□□□□□ -0.42
GGPS1-201ENST00000282841 CTAGE5O15320 804 aa12.44□□□□□ -0.42
GGPS1-201ENST00000282841 TRAPPC10P48553 1259 aa12.44□□□□□ -0.42
GGPS1-201ENST00000282841 MRPL12P52815 198 aaKnown RBP12.44□□□□□ -0.42
GGPS1-201ENST00000282841 HMGCS2P54868 508 aa12.44□□□□□ -0.42
GGPS1-201ENST00000282841 SBF1O95248 1867 aa12.44□□□□□ -0.42
GGPS1-201ENST00000282841 COL2A1P02458 1487 aaPredicted RBP12.44□□□□□ -0.42
GGPS1-201ENST00000282841 MDM2Q00987 491 aaPredicted RBP12.44□□□□□ -0.42
GGPS1-201ENST00000282841 POSTNQ15063 836 aa12.44□□□□□ -0.42
GGPS1-201ENST00000282841 GALNT17Q6IS24 598 aa12.44□□□□□ -0.42
GGPS1-201ENST00000282841 FERMT2Q96AC1 680 aa12.44□□□□□ -0.42
GGPS1-201ENST00000282841 MTRQ99707 1265 aa12.44□□□□□ -0.42
GGPS1-201ENST00000282841 PDCL3Q9H2J4 239 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms