RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 CCDC175P0C221 793 aa8.15□□□□□ -1.1
SPARCL1-201ENST00000282470 PPP1R2P41236 205 aa8.15□□□□□ -1.1
SPARCL1-201ENST00000282470 CLK2P49760 499 aaKnown RBP8.15□□□□□ -1.1
SPARCL1-201ENST00000282470 PICALMQ13492 652 aa8.15□□□□□ -1.1
SPARCL1-201ENST00000282470 LETM2Q2VYF4 491 aa8.15□□□□□ -1.1
SPARCL1-201ENST00000282470 APOBEC3HQ6NTF7 200 aaKnown RBP8.15□□□□□ -1.1
SPARCL1-201ENST00000282470 CDC42EP5Q6NZY7 148 aa8.15□□□□□ -1.1
SPARCL1-201ENST00000282470 DPP8Q6V1X1 898 aaPredicted RBP8.15□□□□□ -1.1
SPARCL1-201ENST00000282470 COL23A1Q86Y22 540 aaPredicted RBP8.15□□□□□ -1.1
SPARCL1-201ENST00000282470 ZNF397Q8NF99 534 aaPredicted RBP8.15□□□□□ -1.1
SPARCL1-201ENST00000282470 FLAD1Q8NFF5 587 aa8.15□□□□□ -1.1
SPARCL1-201ENST00000282470 NOC3LQ8WTT2 800 aaKnown RBP8.15□□□□□ -1.1
SPARCL1-201ENST00000282470 MTMR8Q96EF0 704 aa8.15□□□□□ -1.1
SPARCL1-201ENST00000282470 DHTKD1Q96HY7 919 aaPredicted RBP8.15□□□□□ -1.1
SPARCL1-201ENST00000282470 MMTAG2Q9BU76 263 aaKnown RBP8.15□□□□□ -1.1
SPARCL1-201ENST00000282470 TRIM9Q9C026 710 aa8.15□□□□□ -1.1
SPARCL1-201ENST00000282470 PNMA6FA0A0J9YX94 578 aa8.15□□□□□ -1.11
SPARCL1-201ENST00000282470 A0A1W2PQC6 194 aa8.15□□□□□ -1.11
SPARCL1-201ENST00000282470 EDIL3O43854 480 aa8.15□□□□□ -1.11
SPARCL1-201ENST00000282470 FXR1P51114 621 aaKnown RBP eCLIP8.15□□□□□ -1.11
SPARCL1-201ENST00000282470 ADCY7P51828 1080 aa8.15□□□□□ -1.11
SPARCL1-201ENST00000282470 STIM1Q13586 685 aa8.15□□□□□ -1.11
SPARCL1-201ENST00000282470 GPATCH4Q5T3I0 446 aaKnown RBP8.15□□□□□ -1.11
SPARCL1-201ENST00000282470 TTI2Q6NXR4 508 aa8.15□□□□□ -1.11
SPARCL1-201ENST00000282470 TEKT1Q969V4 418 aa8.15□□□□□ -1.11
SPARCL1-201ENST00000282470 KIFC2Q96AC6 838 aa8.15□□□□□ -1.11
SPARCL1-201ENST00000282470 MASTLQ96GX5 879 aa8.15□□□□□ -1.11
SPARCL1-201ENST00000282470 ZDHHC15Q96MV8 337 aa8.15□□□□□ -1.11
SPARCL1-201ENST00000282470 UBA5Q9GZZ9 404 aa8.15□□□□□ -1.11
SPARCL1-201ENST00000282470 RIC8AQ9NPQ8 531 aa8.15□□□□□ -1.11
SPARCL1-201ENST00000282470 USP40Q9NVE5 1235 aa8.15□□□□□ -1.11
SPARCL1-201ENST00000282470 ADGRG1Q9Y653 693 aa8.15□□□□□ -1.11
SPARCL1-201ENST00000282470 FRMPD2Q68DX3 1309 aaPredicted RBP8.15□□□□□ -1.11
SPARCL1-201ENST00000282470 TNS1Q9HBL0 1735 aaKnown RBP8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 PSMA7O14818 248 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 N4BP3O15049 544 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 HOXA7P31268 230 aaPredicted RBP8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 CASP14P31944 242 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 CCT6AP40227 531 aaKnown RBP8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 PPP4R3AQ6IN85 833 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 CNNM4Q6P4Q7 775 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 PODNQ7Z5L7 613 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 POTEDQ86YR6 584 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 LRRC47Q8N1G4 583 aaKnown RBP8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 RASSF8Q8NHQ8 419 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 JMJD4Q9H9V9 463 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 BIN2Q9UBW5 565 aaPredicted RBP8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 STK17AQ9UEE5 414 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 SCN9AQ15858 1988 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 SOWAHDA6NJG2 315 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 LGALS16A8MUM7 142 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 NPM3O75607 178 aaKnown RBP8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 HLA-DOAP06340 250 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 TPM1P09493 284 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 PMS1P54277 932 aaKnown RBP8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 MAP3K9P80192 1104 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 HDLBPQ00341 1268 aaKnown RBP8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 AMPD3Q01432 767 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 PDIA5Q14554 519 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 MTF1Q14872 753 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 ELF2Q15723 593 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 RAD9BQ6WBX8 426 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 TMTC1Q8IUR5 882 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 ZNF507Q8TCN5 953 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 CCDC17Q96LX7 622 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 MRPL44Q9H9J2 332 aaKnown RBP8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 ABHD10Q9NUJ1 306 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 PSME4Q14997 1843 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 MYH7BA7E2Y1 1941 aa8.14□□□□□ -1.11
SPARCL1-201ENST00000282470 COL2A1P02458 1487 aaPredicted RBP8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 PPP1R11O60927 126 aaPredicted RBP8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 H2AFXP16104 143 aaPredicted RBP8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 CALCRLQ16602 461 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 ADGRF4Q8IZF3 695 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 WDR24Q96S15 920 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 VAT1LQ9HCJ6 419 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 TMEM260Q9NX78 707 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 TAB2Q9NYJ8 693 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 BICDL2A1A5D9 508 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 TRIM49BA6NDI0 452 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 COBLO75128 1261 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 TADA3O75528 432 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 CASQ1P31415 396 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 TECP42680 631 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 CRKP46108 304 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 GRB10Q13322 594 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 DOK7Q18PE1 504 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 JAKMIP3Q5VZ66 844 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 LRRN4CLQ8ND94 238 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 MKL1Q969V6 931 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 CCDC47Q96A33 483 aaKnown RBP8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 CALML4Q96GE6 196 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 DESI2Q9BSY9 194 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 MXD3Q9BW11 206 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 IDI2Q9BXS1 227 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 VPS16Q9H269 839 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 DHX36Q9H2U1 1008 aaKnown RBP8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 MRFAP1Q9Y605 127 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 EFCAB8A8MWE9 144 aa8.13□□□□□ -1.11
SPARCL1-201ENST00000282470 F8W031 263 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms