RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 ALAS1P13196 640 aa13.01□□□□□ -0.33
XRCC4-201ENST00000282268 MCM7P33993 719 aa13.01□□□□□ -0.33
XRCC4-201ENST00000282268 SH3D19Q5HYK7 790 aa13.01□□□□□ -0.33
XRCC4-201ENST00000282268 TTC38Q5R3I4 469 aa13.01□□□□□ -0.33
XRCC4-201ENST00000282268 CST9Q5W186 159 aa13.01□□□□□ -0.33
XRCC4-201ENST00000282268 KRT25Q7Z3Z0 450 aa13.01□□□□□ -0.33
XRCC4-201ENST00000282268 LINC00301Q8NCQ3 95 aa13.01□□□□□ -0.33
XRCC4-201ENST00000282268 RCOR1Q9UKL0 485 aa13.01□□□□□ -0.33
XRCC4-201ENST00000282268 MRVI1Q9Y6F6 885 aa13.01□□□□□ -0.33
XRCC4-201ENST00000282268 PAPPA2Q9BXP8 1791 aa13□□□□□ -0.33
XRCC4-201ENST00000282268 A0A0G2JLL6 359 aaPredicted RBP13□□□□□ -0.33
XRCC4-201ENST00000282268 CFBP00751 764 aa13□□□□□ -0.33
XRCC4-201ENST00000282268 HOXA13P31271 388 aaPredicted RBP13□□□□□ -0.33
XRCC4-201ENST00000282268 DSG3P32926 999 aa13□□□□□ -0.33
XRCC4-201ENST00000282268 NASPP49321 788 aaPredicted RBP13□□□□□ -0.33
XRCC4-201ENST00000282268 UBE2HP62256 183 aa13□□□□□ -0.33
XRCC4-201ENST00000282268 PLS1Q14651 629 aa13□□□□□ -0.33
XRCC4-201ENST00000282268 COG2Q14746 738 aa13□□□□□ -0.33
XRCC4-201ENST00000282268 NONOQ15233 471 aaKnown RBP eCLIP13□□□□□ -0.33
XRCC4-201ENST00000282268 PRRT2Q7Z6L0 340 aaPredicted RBP13□□□□□ -0.33
XRCC4-201ENST00000282268 TBC1D5Q92609 795 aa13□□□□□ -0.33
XRCC4-201ENST00000282268 POLR3EQ9NVU0 708 aa13□□□□□ -0.33
XRCC4-201ENST00000282268 VWA5AO00534 786 aa12.99□□□□□ -0.33
XRCC4-201ENST00000282268 CXCL11O14625 94 aa12.99□□□□□ -0.33
XRCC4-201ENST00000282268 PEX10O60683 326 aa12.99□□□□□ -0.33
XRCC4-201ENST00000282268 YEATS4O95619 227 aa12.99□□□□□ -0.33
XRCC4-201ENST00000282268 ICAM1P05362 532 aa12.99□□□□□ -0.33
XRCC4-201ENST00000282268 LETM2Q2VYF4 491 aa12.99□□□□□ -0.33
XRCC4-201ENST00000282268 FCHSD1Q86WN1 690 aa12.99□□□□□ -0.33
XRCC4-201ENST00000282268 FAM177A1Q8N128 213 aaPredicted RBP12.99□□□□□ -0.33
XRCC4-201ENST00000282268 TBCKQ8TEA7 893 aa12.99□□□□□ -0.33
XRCC4-201ENST00000282268 SLC38A10Q9HBR0 1119 aa12.99□□□□□ -0.33
XRCC4-201ENST00000282268 PCDHA7Q9UN72 937 aa12.99□□□□□ -0.33
XRCC4-201ENST00000282268 MRPL11Q9Y3B7 192 aaKnown RBP12.99□□□□□ -0.33
XRCC4-201ENST00000282268 TCHHQ07283 1943 aa12.99□□□□□ -0.33
XRCC4-201ENST00000282268 MYH15Q9Y2K3 1946 aa12.99□□□□□ -0.33
XRCC4-201ENST00000282268 ZNF536O15090 1300 aa12.99□□□□□ -0.33
XRCC4-201ENST00000282268 ELP1O95163 1332 aa12.99□□□□□ -0.33
XRCC4-201ENST00000282268 ABCB11O95342 1321 aa12.99□□□□□ -0.33
XRCC4-201ENST00000282268 HUNKP57058 714 aa12.99□□□□□ -0.33
XRCC4-201ENST00000282268 FKBP1BP68106 108 aa12.99□□□□□ -0.33
XRCC4-201ENST00000282268 IRX3P78415 501 aaPredicted RBP12.99□□□□□ -0.33
XRCC4-201ENST00000282268 SNAPC2Q13487 334 aa12.99□□□□□ -0.33
XRCC4-201ENST00000282268 SLC39A14Q15043 492 aa12.99□□□□□ -0.33
XRCC4-201ENST00000282268 PTPAQ15257 358 aa12.99□□□□□ -0.33
XRCC4-201ENST00000282268 SKOR2Q2VWA4 1001 aaPredicted RBP12.99□□□□□ -0.33
XRCC4-201ENST00000282268 CAVIN1Q6NZI2 390 aaKnown RBP12.99□□□□□ -0.33
XRCC4-201ENST00000282268 KCNG4Q8TDN1 519 aa12.99□□□□□ -0.33
XRCC4-201ENST00000282268 KCNH4Q9UQ05 1017 aa12.99□□□□□ -0.33
XRCC4-201ENST00000282268 MEIS2O14770 477 aa12.98□□□□□ -0.33
XRCC4-201ENST00000282268 OPLAHO14841 1288 aa12.98□□□□□ -0.33
XRCC4-201ENST00000282268 CCNT1O60563 726 aaKnown RBP12.98□□□□□ -0.33
XRCC4-201ENST00000282268 TRAF1Q13077 416 aa12.98□□□□□ -0.33
XRCC4-201ENST00000282268 MUM1L1Q5H9M0 696 aa12.98□□□□□ -0.33
XRCC4-201ENST00000282268 SNRNP48Q6IEG0 339 aaKnown RBP12.98□□□□□ -0.33
XRCC4-201ENST00000282268 CCAR1Q8IX12 1150 aaKnown RBP12.98□□□□□ -0.33
XRCC4-201ENST00000282268 PROCA1Q8NCQ7 364 aaPredicted RBP12.98□□□□□ -0.33
XRCC4-201ENST00000282268 CLIC6Q96NY7 704 aa12.98□□□□□ -0.33
XRCC4-201ENST00000282268 P2RX7Q99572 595 aaKnown RBP12.98□□□□□ -0.33
XRCC4-201ENST00000282268 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.98□□□□□ -0.33
XRCC4-201ENST00000282268 CEP131Q9UPN4 1083 aa12.98□□□□□ -0.33
XRCC4-201ENST00000282268 SPDYE16A6NNV3 312 aaPredicted RBP12.97□□□□□ -0.33
XRCC4-201ENST00000282268 GCOM1H8Y6P7 765 aaPredicted RBP12.97□□□□□ -0.33
XRCC4-201ENST00000282268 POLR2MP0CAP2 368 aa12.97□□□□□ -0.33
XRCC4-201ENST00000282268 LIG1P18858 919 aa12.97□□□□□ -0.33
XRCC4-201ENST00000282268 CLK2P49760 499 aaKnown RBP12.97□□□□□ -0.33
XRCC4-201ENST00000282268 TMEM132BQ14DG7 1078 aa12.97□□□□□ -0.33
XRCC4-201ENST00000282268 SPECC1Q5M775 1068 aa12.97□□□□□ -0.33
XRCC4-201ENST00000282268 FASTKD5Q7L8L6 764 aaKnown RBP12.97□□□□□ -0.33
XRCC4-201ENST00000282268 PAGR1Q9BTK6 254 aa12.97□□□□□ -0.33
XRCC4-201ENST00000282268 GLT8D2Q9H1C3 349 aa12.97□□□□□ -0.33
XRCC4-201ENST00000282268 ASCC2Q9H1I8 757 aaPredicted RBP12.97□□□□□ -0.33
XRCC4-201ENST00000282268 HOXC10Q9NYD6 342 aa12.97□□□□□ -0.33
XRCC4-201ENST00000282268 AGTPBP1Q9UPW5 1226 aa12.97□□□□□ -0.33
XRCC4-201ENST00000282268 SPDYE3A6NKU9 549 aa12.96□□□□□ -0.33
XRCC4-201ENST00000282268 NFIBO00712 420 aa12.96□□□□□ -0.33
XRCC4-201ENST00000282268 KIF3CO14782 793 aa12.96□□□□□ -0.33
XRCC4-201ENST00000282268 MBD3O95983 291 aa12.96□□□□□ -0.33
XRCC4-201ENST00000282268 OSBPP22059 807 aa12.96□□□□□ -0.33
XRCC4-201ENST00000282268 TRAPPC10P48553 1259 aa12.96□□□□□ -0.33
XRCC4-201ENST00000282268 UBXN2AP68543 259 aa12.96□□□□□ -0.33
XRCC4-201ENST00000282268 PTGDRQ13258 359 aa12.96□□□□□ -0.33
XRCC4-201ENST00000282268 NEK8Q86SG6 692 aa12.96□□□□□ -0.33
XRCC4-201ENST00000282268 JMYQ8N9B5 988 aa12.96□□□□□ -0.33
XRCC4-201ENST00000282268 FSIP1Q8NA03 581 aa12.96□□□□□ -0.33
XRCC4-201ENST00000282268 TRERF1Q96PN7 1200 aa12.96□□□□□ -0.33
XRCC4-201ENST00000282268 UIMC1Q96RL1 719 aa12.96□□□□□ -0.33
XRCC4-201ENST00000282268 ANP32EQ9BTT0 268 aa12.96□□□□□ -0.33
XRCC4-201ENST00000282268 ANO3Q9BYT9 981 aa12.96□□□□□ -0.33
XRCC4-201ENST00000282268 CCL15-CCL14A0A0B4J2E2 113 aa12.96□□□□□ -0.34
XRCC4-201ENST00000282268 ZNF157P51786 506 aaPredicted RBP12.96□□□□□ -0.34
XRCC4-201ENST00000282268 GRIN1Q05586 938 aa12.96□□□□□ -0.34
XRCC4-201ENST00000282268 MOGSQ13724 837 aa12.96□□□□□ -0.34
XRCC4-201ENST00000282268 CCL15Q16663 113 aa12.96□□□□□ -0.34
XRCC4-201ENST00000282268 KLHL40Q2TBA0 621 aa12.96□□□□□ -0.34
XRCC4-201ENST00000282268 SPRYD7Q5W111 196 aa12.96□□□□□ -0.34
XRCC4-201ENST00000282268 GPAT2Q6NUI2 795 aa12.96□□□□□ -0.34
XRCC4-201ENST00000282268 NSMFQ6X4W1 530 aa12.96□□□□□ -0.34
XRCC4-201ENST00000282268 REPS2Q8NFH8 660 aa12.96□□□□□ -0.34
XRCC4-201ENST00000282268 GOLPH3LQ9H4A5 285 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms