RNA–Protein interactions for RNA: ENST00000279052.10

ERGIC3-201, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 2,846 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-201ENST00000279052 IFT43Q96FT9 208 aa11.71□□□□□ -0.53
ERGIC3-201ENST00000279052 FTOQ9C0B1 505 aaKnown RBP eCLIP11.71□□□□□ -0.53
ERGIC3-201ENST00000279052 FAM192AQ9GZU8 254 aa11.71□□□□□ -0.53
ERGIC3-201ENST00000279052 CHMP2BQ9UQN3 213 aa11.71□□□□□ -0.53
ERGIC3-201ENST00000279052 CD109Q6YHK3 1445 aa11.71□□□□□ -0.53
ERGIC3-201ENST00000279052 TULP4Q9NRJ4 1543 aa11.71□□□□□ -0.54
ERGIC3-201ENST00000279052 IFIT2P09913 472 aaKnown RBP11.71□□□□□ -0.54
ERGIC3-201ENST00000279052 GPSM2P81274 684 aa11.71□□□□□ -0.54
ERGIC3-201ENST00000279052 POU5F1Q01860 360 aaKnown RBP11.71□□□□□ -0.54
ERGIC3-201ENST00000279052 FAM117BQ6P1L5 589 aa11.71□□□□□ -0.54
ERGIC3-201ENST00000279052 TMEM154Q6P9G4 183 aa11.71□□□□□ -0.54
ERGIC3-201ENST00000279052 ESX1Q8N693 406 aa11.71□□□□□ -0.54
ERGIC3-201ENST00000279052 CCDC148Q8NFR7 591 aa11.71□□□□□ -0.54
ERGIC3-201ENST00000279052 NDST4Q9H3R1 872 aa11.71□□□□□ -0.54
ERGIC3-201ENST00000279052 FAM184BQ9ULE4 1060 aa11.71□□□□□ -0.54
ERGIC3-201ENST00000279052 MLH3Q9UHC1 1453 aa11.7□□□□□ -0.54
ERGIC3-201ENST00000279052 PFKFB2O60825 505 aa11.7□□□□□ -0.54
ERGIC3-201ENST00000279052 PPP1R37O75864 691 aa11.7□□□□□ -0.54
ERGIC3-201ENST00000279052 FOSBP53539 338 aa11.7□□□□□ -0.54
ERGIC3-201ENST00000279052 SUZ12Q15022 739 aaKnown RBP11.7□□□□□ -0.54
ERGIC3-201ENST00000279052 SEPT7Q16181 437 aaKnown RBP11.7□□□□□ -0.54
ERGIC3-201ENST00000279052 TBC1D9BQ66K14 1250 aa11.7□□□□□ -0.54
ERGIC3-201ENST00000279052 CCDC63Q8NA47 563 aa11.7□□□□□ -0.54
ERGIC3-201ENST00000279052 PFDN4Q9NQP4 134 aa11.7□□□□□ -0.54
ERGIC3-201ENST00000279052 ABCF3Q9NUQ8 709 aa11.7□□□□□ -0.54
ERGIC3-201ENST00000279052 ATAD3AQ9NVI7 634 aa11.7□□□□□ -0.54
ERGIC3-201ENST00000279052 HYPKQ9NX55 129 aa11.7□□□□□ -0.54
ERGIC3-201ENST00000279052 CFAP45Q9UL16 551 aa11.7□□□□□ -0.54
ERGIC3-201ENST00000279052 CFAP73A6NFT4 308 aa11.7□□□□□ -0.54
ERGIC3-201ENST00000279052 TTC34A8MYJ7 566 aa11.7□□□□□ -0.54
ERGIC3-201ENST00000279052 MAP3K12Q12852 859 aa11.7□□□□□ -0.54
ERGIC3-201ENST00000279052 TTC6Q86TZ1 520 aa11.7□□□□□ -0.54
ERGIC3-201ENST00000279052 AS3MTQ9HBK9 375 aa11.7□□□□□ -0.54
ERGIC3-201ENST00000279052 ABCC3O15438 1527 aa11.7□□□□□ -0.54
ERGIC3-201ENST00000279052 A0A1W2PP64 1363 aa11.7□□□□□ -0.54
ERGIC3-201ENST00000279052 EIF4E1BA6NMX2 242 aaKnown RBP11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 KRT14P02533 472 aa11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 ATP2A2P16615 1042 aaKnown RBP11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 ERCC5P28715 1186 aaPredicted RBP11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 BYSLQ13895 437 aaKnown RBP11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 ZNF268Q14587 947 aaPredicted RBP11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 SPRED3Q2MJR0 410 aa11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 TRIM68Q6AZZ1 485 aa11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 DQX1Q8TE96 717 aaKnown RBP11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 ATRIPQ8WXE1 791 aa11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 NCSTNQ92542 709 aa11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 GPR101Q96P66 508 aaPredicted RBP11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 DHX36Q9H2U1 1008 aaKnown RBP11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 NOB1Q9ULX3 412 aaKnown RBP11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 ALDH2P05091 517 aa11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 TUFMP49411 452 aaKnown RBP11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 AKAP17AQ02040 695 aaKnown RBP11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 IFI16Q16666 785 aaKnown RBP11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 CFAP100Q494V2 611 aa11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 CABP7Q86V35 215 aa11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 PNMA8AQ86V59 439 aaPredicted RBP11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 AZIN2Q96A70 460 aa11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 CYFIP2Q96F07 1278 aa11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 EPSTI1Q96J88 318 aa11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 HIC2Q96JB3 615 aa11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 PLEKHF1Q96S99 279 aa11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 XPO4Q9C0E2 1151 aaKnown RBP11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 TRIM35Q9UPQ4 493 aa11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 KAT6BQ8WYB5 2073 aa11.69□□□□□ -0.54
ERGIC3-201ENST00000279052 hCG_2014768A0A024R1R8 64 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 ZBED4O75132 1171 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 PORP16435 677 aaPredicted RBP11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 CYP4A11Q02928 519 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 KCTD16Q68DU8 428 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 KDM7AQ6ZMT4 941 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 RNF10Q8N5U6 811 aaKnown RBP11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 CDK5RAP3Q96JB5 506 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 RPS6KC1Q96S38 1066 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 KIAA1522Q9P206 1035 aaPredicted RBP11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 STAG3Q9UJ98 1225 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 FRMPD1Q5SYB0 1578 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 HECW2Q9P2P5 1572 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 MINK1Q8N4C8 1332 aaPredicted RBP11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 ADGRB2O60241 1585 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 ANKRD62A6NC57 917 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 PCK1P35558 622 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 RFC5P40937 340 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 IDI1Q13907 227 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 SHROOM1Q2M3G4 852 aaPredicted RBP11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 OR52E8Q6IFG1 317 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 RAB11FIP4Q86YS3 637 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 TRPC4APQ8TEL6 797 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 IFT81Q8WYA0 676 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 ABTB1Q969K4 478 aaPredicted RBP11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 CATSPER2Q96P56 530 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 SIKE1Q9BRV8 207 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 CCDC162PA2VCL2 907 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 TEX28O15482 410 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 DIAPH1O60610 1272 aaKnown RBP11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 GSTA1P08263 222 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 GSTT2P0CG29 244 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 GSTT2BP0CG30 244 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 KRT9P35527 623 aa11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 MSLNQ13421 630 aaPredicted RBP11.68□□□□□ -0.54
ERGIC3-201ENST00000279052 TRIM29Q14134 588 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms