RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 NEMFO60524 1076 aa25.05■■□□□ 1.6
CCDC7-201ENST00000277657 SLFN14P0C7P3 912 aa25.05■■□□□ 1.6
CCDC7-201ENST00000277657 POSTNQ15063 836 aa25.05■■□□□ 1.6
CCDC7-201ENST00000277657 ZRSR1Q15695 479 aaKnown RBP25.05■■□□□ 1.6
CCDC7-201ENST00000277657 CEP57L1Q8IYX8 460 aa25.05■■□□□ 1.6
CCDC7-201ENST00000277657 EPS15P42566 896 aa25.04■■□□□ 1.6
CCDC7-201ENST00000277657 SNAP25P60880 206 aa25.04■■□□□ 1.6
CCDC7-201ENST00000277657 DPCR1Q3MIW9 517 aa25.04■■□□□ 1.6
CCDC7-201ENST00000277657 PYM1Q9BRP8 204 aaKnown RBP25.04■■□□□ 1.6
CCDC7-201ENST00000277657 OR52Z1P0C646 297 aa25.04■■□□□ 1.6
CCDC7-201ENST00000277657 HIRAP54198 1017 aaPredicted RBP25.04■■□□□ 1.6
CCDC7-201ENST00000277657 NT5DC1Q5TFE4 455 aa25.04■■□□□ 1.6
CCDC7-201ENST00000277657 DCAF15Q66K64 600 aa25.04■■□□□ 1.6
CCDC7-201ENST00000277657 CCDC84Q86UT8 332 aaPredicted RBP25.04■■□□□ 1.6
CCDC7-201ENST00000277657 CHURC1Q8WUH1 139 aa25.04■■□□□ 1.6
CCDC7-201ENST00000277657 DHX58Q96C10 678 aa25.04■■□□□ 1.6
CCDC7-201ENST00000277657 NAT10Q9H0A0 1025 aaKnown RBP25.04■■□□□ 1.6
CCDC7-201ENST00000277657 PCDHA5Q9Y5H7 936 aa25.04■■□□□ 1.6
CCDC7-201ENST00000277657 E2F4Q16254 413 aa25.03■■□□□ 1.6
CCDC7-201ENST00000277657 SH3RF1Q7Z6J0 888 aa25.03■■□□□ 1.6
CCDC7-201ENST00000277657 HOOK2Q96ED9 719 aa25.03■■□□□ 1.6
CCDC7-201ENST00000277657 BPIFA3Q9BQP9 254 aa25.03■■□□□ 1.6
CCDC7-201ENST00000277657 ZNF341Q9BYN7 854 aa25.03■■□□□ 1.6
CCDC7-201ENST00000277657 ZNF112Q9UJU3 913 aa25.03■■□□□ 1.6
CCDC7-201ENST00000277657 BIN1O00499 593 aa25.02■■□□□ 1.6
CCDC7-201ENST00000277657 AP5Z1O43299 807 aa25.02■■□□□ 1.6
CCDC7-201ENST00000277657 FAM160B2Q86V87 743 aa25.02■■□□□ 1.6
CCDC7-201ENST00000277657 MEIS2O14770 477 aa25.02■■□□□ 1.6
CCDC7-201ENST00000277657 ADCY5O95622 1261 aa25.02■■□□□ 1.6
CCDC7-201ENST00000277657 YBX3P16989 372 aaKnown RBP eCLIP25.02■■□□□ 1.6
CCDC7-201ENST00000277657 SARSP49591 514 aaKnown RBP25.02■■□□□ 1.6
CCDC7-201ENST00000277657 ZYXQ15942 572 aaKnown RBP25.02■■□□□ 1.6
CCDC7-201ENST00000277657 PPP4R3AQ6IN85 833 aa25.02■■□□□ 1.6
CCDC7-201ENST00000277657 SPATA20Q8TB22 786 aa25.02■■□□□ 1.6
CCDC7-201ENST00000277657 CCDC34Q96HJ3 373 aa25.02■■□□□ 1.6
CCDC7-201ENST00000277657 KIAA1683Q9H0B3 1180 aa25.02■■□□□ 1.6
CCDC7-201ENST00000277657 GGA3Q9NZ52 723 aa25.02■■□□□ 1.6
CCDC7-201ENST00000277657 FEM1BQ9UK73 627 aa25.02■■□□□ 1.6
CCDC7-201ENST00000277657 PPP2R3BQ9Y5P8 575 aa25.02■■□□□ 1.6
CCDC7-201ENST00000277657 MYH7BA7E2Y1 1941 aa25.01■■□□□ 1.59
CCDC7-201ENST00000277657 DOCK1Q14185 1865 aa25.01■■□□□ 1.59
CCDC7-201ENST00000277657 USP17L15C9J2P7 530 aa25.01■■□□□ 1.59
CCDC7-201ENST00000277657 USP17L13C9JLJ4 530 aa25.01■■□□□ 1.59
CCDC7-201ENST00000277657 USP17L11C9JVI0 530 aa25.01■■□□□ 1.59
CCDC7-201ENST00000277657 USP17L18D6R9N7 530 aa25.01■■□□□ 1.59
CCDC7-201ENST00000277657 USP17L22D6RA61 530 aa25.01■■□□□ 1.59
CCDC7-201ENST00000277657 USP17L17D6RBQ6 530 aa25.01■■□□□ 1.59
CCDC7-201ENST00000277657 USP17L19D6RCP7 530 aa25.01■■□□□ 1.59
CCDC7-201ENST00000277657 USP17L20D6RJB6 530 aa25.01■■□□□ 1.59
CCDC7-201ENST00000277657 PRR29P0C7W0 189 aa25.01■■□□□ 1.59
CCDC7-201ENST00000277657 USP17L24Q0WX57 530 aa25.01■■□□□ 1.59
CCDC7-201ENST00000277657 TRAF1Q13077 416 aa25.01■■□□□ 1.59
CCDC7-201ENST00000277657 MCTP2Q6DN12 878 aa25.01■■□□□ 1.59
CCDC7-201ENST00000277657 USP17L6PQ6QN14 398 aa25.01■■□□□ 1.59
CCDC7-201ENST00000277657 DHX40Q8IX18 779 aaKnown RBP25.01■■□□□ 1.59
CCDC7-201ENST00000277657 IQUBQ8NA54 791 aa25.01■■□□□ 1.59
CCDC7-201ENST00000277657 AK8Q96MA6 479 aa25.01■■□□□ 1.59
CCDC7-201ENST00000277657 MTMR9Q96QG7 549 aa25.01■■□□□ 1.59
CCDC7-201ENST00000277657 RANBP17Q9H2T7 1088 aaKnown RBP25.01■■□□□ 1.59
CCDC7-201ENST00000277657 TXLNAP40222 546 aa25■■□□□ 1.59
CCDC7-201ENST00000277657 AP3B2Q13367 1082 aa25■■□□□ 1.59
CCDC7-201ENST00000277657 USH1GQ495M9 461 aa25■■□□□ 1.59
CCDC7-201ENST00000277657 POTEDQ86YR6 584 aa25■■□□□ 1.59
CCDC7-201ENST00000277657 TEX2Q8IWB9 1127 aa25■■□□□ 1.59
CCDC7-201ENST00000277657 RNF181Q9P0P0 153 aa25■■□□□ 1.59
CCDC7-201ENST00000277657 DDNO94850 711 aaPredicted RBP25■■□□□ 1.59
CCDC7-201ENST00000277657 TDP2O95551 362 aa25■■□□□ 1.59
CCDC7-201ENST00000277657 INPP5BP32019 993 aa25■■□□□ 1.59
CCDC7-201ENST00000277657 LPAR1Q92633 364 aa25■■□□□ 1.59
CCDC7-201ENST00000277657 PAGE5Q96GU1 130 aa25■■□□□ 1.59
CCDC7-201ENST00000277657 FEZ1Q99689 392 aa25■■□□□ 1.59
CCDC7-201ENST00000277657 CCSER1Q9C0I3 900 aa25■■□□□ 1.59
CCDC7-201ENST00000277657 OPLAHO14841 1288 aa24.99■■□□□ 1.59
CCDC7-201ENST00000277657 GRAMD1CQ8IYS0 662 aa24.99■■□□□ 1.59
CCDC7-201ENST00000277657 TRIM44Q96DX7 344 aaPredicted RBP24.99■■□□□ 1.59
CCDC7-201ENST00000277657 SLC37A4O43826 429 aa24.98■■□□□ 1.59
CCDC7-201ENST00000277657 GCFC2P16383 781 aaKnown RBP24.98■■□□□ 1.59
CCDC7-201ENST00000277657 PDXDC2PQ6P474 469 aa24.98■■□□□ 1.59
CCDC7-201ENST00000277657 PITPNM2Q9BZ72 1349 aa24.98■■□□□ 1.59
CCDC7-201ENST00000277657 CDC25AP30304 524 aa24.98■■□□□ 1.59
CCDC7-201ENST00000277657 CALCRLQ16602 461 aa24.98■■□□□ 1.59
CCDC7-201ENST00000277657 SMARCE1Q969G3 411 aa24.98■■□□□ 1.59
CCDC7-201ENST00000277657 KIFC2Q96AC6 838 aa24.98■■□□□ 1.59
CCDC7-201ENST00000277657 NAP1L4Q99733 375 aaKnown RBP24.98■■□□□ 1.59
CCDC7-201ENST00000277657 ANO3Q9BYT9 981 aa24.98■■□□□ 1.59
CCDC7-201ENST00000277657 GOLGA6L19H0YKK7 550 aa24.97■■□□□ 1.59
CCDC7-201ENST00000277657 WDR46O15213 610 aaKnown RBP24.97■■□□□ 1.59
CCDC7-201ENST00000277657 USP11P51784 963 aa24.97■■□□□ 1.59
CCDC7-201ENST00000277657 PRAMEF18Q5VWM3 479 aa24.97■■□□□ 1.59
CCDC7-201ENST00000277657 SCYL3Q8IZE3 742 aa24.97■■□□□ 1.59
CCDC7-201ENST00000277657 IGSF22Q8N9C0 903 aa24.97■■□□□ 1.59
CCDC7-201ENST00000277657 TRIML1Q8N9V2 468 aa24.97■■□□□ 1.59
CCDC7-201ENST00000277657 CRYGNQ8WXF5 182 aa24.97■■□□□ 1.59
CCDC7-201ENST00000277657 P2RX7Q99572 595 aaKnown RBP24.97■■□□□ 1.59
CCDC7-201ENST00000277657 DISC1Q9NRI5 854 aa24.97■■□□□ 1.59
CCDC7-201ENST00000277657 MAN1B1Q9UKM7 699 aa24.97■■□□□ 1.59
CCDC7-201ENST00000277657 PP2D1A8MPX8 630 aa24.96■■□□□ 1.59
CCDC7-201ENST00000277657 BECN2A8MW95 431 aa24.96■■□□□ 1.59
CCDC7-201ENST00000277657 PIK3CDO00329 1044 aa24.96■■□□□ 1.59
CCDC7-201ENST00000277657 BMP6P22004 513 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms