RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 VPS18Q9P253 973 aa12.44□□□□□ -0.42
USP6NL-201ENST00000277575 RPAP1Q9BWH6 1393 aaPredicted RBP12.44□□□□□ -0.42
USP6NL-201ENST00000277575 ADGRB3O60242 1522 aa12.44□□□□□ -0.42
USP6NL-201ENST00000277575 H0YCG3 227 aa12.44□□□□□ -0.42
USP6NL-201ENST00000277575 DALRD3Q5D0E6 543 aaKnown RBP12.44□□□□□ -0.42
USP6NL-201ENST00000277575 TBC1D9BQ66K14 1250 aa12.44□□□□□ -0.42
USP6NL-201ENST00000277575 GBP6Q6ZN66 633 aa12.44□□□□□ -0.42
USP6NL-201ENST00000277575 KIAA1524Q8TCG1 905 aa12.44□□□□□ -0.42
USP6NL-201ENST00000277575 PGBD1Q96JS3 809 aa12.44□□□□□ -0.42
USP6NL-201ENST00000277575 SPHKAPQ2M3C7 1700 aa12.44□□□□□ -0.42
USP6NL-201ENST00000277575 USP14P54578 494 aa12.44□□□□□ -0.42
USP6NL-201ENST00000277575 ZBTB16Q05516 673 aa12.44□□□□□ -0.42
USP6NL-201ENST00000277575 ARMCX5Q6P1M9 558 aa12.44□□□□□ -0.42
USP6NL-201ENST00000277575 MIGA2Q7L4E1 593 aa12.44□□□□□ -0.42
USP6NL-201ENST00000277575 FBF1Q8TES7 1133 aa12.44□□□□□ -0.42
USP6NL-201ENST00000277575 CD209Q9NNX6 404 aa12.44□□□□□ -0.42
USP6NL-201ENST00000277575 KCNK9Q9NPC2 374 aa12.44□□□□□ -0.42
USP6NL-201ENST00000277575 MYO1AQ9UBC5 1043 aa12.44□□□□□ -0.42
USP6NL-201ENST00000277575 U2AF2P26368 475 aaKnown RBP eCLIP12.43□□□□□ -0.421e-6■■■□□ 17.4
USP6NL-201ENST00000277575 CDC25AP30304 524 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 HACE1Q8IYU2 909 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 LRRIQ4A6NIV6 560 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 hCG_1984214I3L0E3 225 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 STAT2P52630 851 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 CCDC14Q49A88 953 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 GAS2L3Q86XJ1 694 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 SYCE1Q8N0S2 351 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 ZNF713Q8N859 430 aaPredicted RBP12.43□□□□□ -0.42
USP6NL-201ENST00000277575 U2AF1L4Q8WU68 220 aaKnown RBP12.43□□□□□ -0.42
USP6NL-201ENST00000277575 NRBP2Q9NSY0 501 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 RSPH14Q9UHP6 348 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 DAPK3O43293 454 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 NT5C2P49902 561 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 POLGP54098 1239 aaPredicted RBP12.43□□□□□ -0.42
USP6NL-201ENST00000277575 DAAM2Q86T65 1068 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 DESI2Q9BSY9 194 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 RRAGDQ9NQL2 400 aaPredicted RBP12.43□□□□□ -0.42
USP6NL-201ENST00000277575 SLFN14P0C7P3 912 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 C6orf163Q5TEZ5 329 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 KLHL7Q8IXQ5 586 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 TIGD1Q96MW7 591 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 ADPGKQ9BRR6 497 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 ZNF577Q9BSK1 485 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 ST7Q9NRC1 585 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 ASIC3Q9UHC3 531 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 TSKSQ9UJT2 592 aa12.43□□□□□ -0.42
USP6NL-201ENST00000277575 E7EVH7 732 aa12.42□□□□□ -0.42
USP6NL-201ENST00000277575 DLATP10515 647 aaKnown RBP12.42□□□□□ -0.42
USP6NL-201ENST00000277575 P4HA1P13674 534 aa12.42□□□□□ -0.42
USP6NL-201ENST00000277575 ABCB4P21439 1286 aa12.42□□□□□ -0.42
USP6NL-201ENST00000277575 DMP1Q13316 513 aaPredicted RBP12.42□□□□□ -0.42
USP6NL-201ENST00000277575 CFAP221Q4G0U5 840 aa12.42□□□□□ -0.42
USP6NL-201ENST00000277575 CPLX4Q7Z7G2 160 aa12.42□□□□□ -0.42
USP6NL-201ENST00000277575 WDR11Q9BZH6 1224 aa12.42□□□□□ -0.42
USP6NL-201ENST00000277575 CACNB3P54284 484 aa12.42□□□□□ -0.42
USP6NL-201ENST00000277575 ATP6V0A1Q93050 837 aa12.42□□□□□ -0.42
USP6NL-201ENST00000277575 ZFP91Q96JP5 570 aaPredicted RBP12.42□□□□□ -0.42
USP6NL-201ENST00000277575 UTP11Q9Y3A2 253 aaKnown RBP12.42□□□□□ -0.42
USP6NL-201ENST00000277575 OVOS2A0A0G2JMS6 1433 aa12.42□□□□□ -0.42
USP6NL-201ENST00000277575 OVOS2A0A0J9YW53 1432 aa12.42□□□□□ -0.42
USP6NL-201ENST00000277575 OVOS2Q6IE36 1432 aa12.42□□□□□ -0.42
USP6NL-201ENST00000277575 FAM170AA1A519 330 aa12.42□□□□□ -0.42
USP6NL-201ENST00000277575 CCNA1P78396 465 aa12.42□□□□□ -0.42
USP6NL-201ENST00000277575 DPCR1Q3MIW9 517 aa12.42□□□□□ -0.42
USP6NL-201ENST00000277575 PODNQ7Z5L7 613 aa12.42□□□□□ -0.42
USP6NL-201ENST00000277575 IFT20Q8IY31 132 aa12.42□□□□□ -0.42
USP6NL-201ENST00000277575 N4BP1O75113 896 aaKnown RBP12.41□□□□□ -0.42
USP6NL-201ENST00000277575 TMOD1P28289 359 aa12.41□□□□□ -0.42
USP6NL-201ENST00000277575 POLR2FP61218 127 aaKnown RBP12.41□□□□□ -0.42
USP6NL-201ENST00000277575 YWHAEP62258 255 aaKnown RBP12.41□□□□□ -0.42
USP6NL-201ENST00000277575 SYDE2Q5VT97 1194 aa12.41□□□□□ -0.42
USP6NL-201ENST00000277575 PPM1KQ8N3J5 372 aa12.41□□□□□ -0.42
USP6NL-201ENST00000277575 SH3RF3Q8TEJ3 882 aaPredicted RBP12.41□□□□□ -0.42
USP6NL-201ENST00000277575 GJD4Q96KN9 370 aaPredicted RBP12.41□□□□□ -0.42
USP6NL-201ENST00000277575 C1orf112Q9NSG2 853 aa12.41□□□□□ -0.42
USP6NL-201ENST00000277575 C1orf167Q5SNV9 1468 aa12.41□□□□□ -0.42
USP6NL-201ENST00000277575 IVLP07476 585 aa12.41□□□□□ -0.42
USP6NL-201ENST00000277575 CRB1P82279 1406 aa12.41□□□□□ -0.42
USP6NL-201ENST00000277575 BCORL1Q5H9F3 1711 aa12.41□□□□□ -0.42
USP6NL-201ENST00000277575 MED14O60244 1454 aa12.41□□□□□ -0.42
USP6NL-201ENST00000277575 CYP2D6P10635 497 aa12.41□□□□□ -0.42
USP6NL-201ENST00000277575 RESTQ13127 1097 aa12.41□□□□□ -0.42
USP6NL-201ENST00000277575 ELF2Q15723 593 aa12.41□□□□□ -0.42
USP6NL-201ENST00000277575 RNF169Q8NCN4 708 aa12.41□□□□□ -0.42
USP6NL-201ENST00000277575 FAM76AQ8TAV0 307 aa12.41□□□□□ -0.42
USP6NL-201ENST00000277575 STAG1Q8WVM7 1258 aa12.41□□□□□ -0.42
USP6NL-201ENST00000277575 TUBGCP2Q9BSJ2 902 aa12.41□□□□□ -0.42
USP6NL-201ENST00000277575 CNGA1P29973 690 aa12.41□□□□□ -0.42
USP6NL-201ENST00000277575 TMED8Q6PL24 325 aaPredicted RBP12.41□□□□□ -0.42
USP6NL-201ENST00000277575 DPP9Q86TI2 863 aa12.41□□□□□ -0.42
USP6NL-201ENST00000277575 ANKS4BQ8N8V4 417 aa12.41□□□□□ -0.42
USP6NL-201ENST00000277575 IPO4Q8TEX9 1081 aaKnown RBP12.41□□□□□ -0.42
USP6NL-201ENST00000277575 PCDHB6Q9Y5E3 794 aa12.41□□□□□ -0.42
USP6NL-201ENST00000277575 SAR1BQ9Y6B6 198 aa12.41□□□□□ -0.42
USP6NL-201ENST00000277575 HNRNPDLO14979 420 aaKnown RBP12.4□□□□□ -0.42
USP6NL-201ENST00000277575 PLEKHA8P1O95397 391 aa12.4□□□□□ -0.42
USP6NL-201ENST00000277575 GH2P01242 217 aa12.4□□□□□ -0.42
USP6NL-201ENST00000277575 ASNSP08243 561 aa12.4□□□□□ -0.42
USP6NL-201ENST00000277575 COPB1P53618 953 aaKnown RBP12.4□□□□□ -0.42
USP6NL-201ENST00000277575 YARSP54577 528 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms