RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 PRR29P0C7W0 189 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 PLCG2P16885 1265 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 MCM3P25205 808 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 EEF1GP26641 437 aaKnown RBP11.36□□□□□ -0.59
CPNE9-201ENST00000273027 GYG1P46976 350 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 ZNF157P51786 506 aaPredicted RBP11.36□□□□□ -0.59
CPNE9-201ENST00000273027 GNG11P61952 73 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 MECOMQ03112 1051 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 PAK1Q13153 545 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 PTGDRQ13258 359 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 BRD3Q15059 726 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 E2F4Q16254 413 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 TSR1Q2NL82 804 aaKnown RBP11.36□□□□□ -0.59
CPNE9-201ENST00000273027 COBLL1Q53SF7 1204 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 WWC2Q6AWC2 1192 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 CYP26C1Q6V0L0 522 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 C3orf67Q6ZVT6 689 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 FAM114A1Q8IWE2 563 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 SLF2Q8IX21 1173 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 C2orf69Q8N8R5 385 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 IGSF22Q8N9C0 903 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 SUPT20HQ8NEM7 779 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 OXER1Q8TDS5 423 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 GOLGA1Q92805 767 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 NUP58Q9BVL2 599 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 GBP3Q9H0R5 595 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 VPS33BQ9H267 617 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 SAGE1Q9NXZ1 904 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 PCDHA4Q9UN74 947 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 ATP6V0A2Q9Y487 856 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 V9GYY5 206 aaPredicted RBP11.36□□□□□ -0.59
CPNE9-201ENST00000273027 BICDL2A1A5D9 508 aa11.35□□□□□ -0.59
CPNE9-201ENST00000273027 TMEM232C9JQI7 657 aa11.35□□□□□ -0.59
CPNE9-201ENST00000273027 MFAP3LO75121 409 aa11.35□□□□□ -0.59
CPNE9-201ENST00000273027 ZRANB2O95218 330 aaKnown RBP eCLIP11.35□□□□□ -0.59
CPNE9-201ENST00000273027 AMPD3Q01432 767 aa11.35□□□□□ -0.59
CPNE9-201ENST00000273027 GPS2Q13227 327 aa11.35□□□□□ -0.59
CPNE9-201ENST00000273027 GRM4Q14833 912 aa11.35□□□□□ -0.59
CPNE9-201ENST00000273027 NPY5RQ15761 445 aa11.35□□□□□ -0.59
CPNE9-201ENST00000273027 ERCC6LQ2NKX8 1250 aa11.35□□□□□ -0.59
CPNE9-201ENST00000273027 ARHGAP29Q52LW3 1261 aa11.35□□□□□ -0.59
CPNE9-201ENST00000273027 C12orf60Q5U649 245 aa11.35□□□□□ -0.59
CPNE9-201ENST00000273027 FOXR2Q6PJQ5 311 aa11.35□□□□□ -0.59
CPNE9-201ENST00000273027 RSRC2Q7L4I2 434 aaKnown RBP11.35□□□□□ -0.59
CPNE9-201ENST00000273027 APTXQ7Z2E3 356 aaKnown RBP11.35□□□□□ -0.59
CPNE9-201ENST00000273027 KRT26Q7Z3Y9 468 aa11.35□□□□□ -0.59
CPNE9-201ENST00000273027 CTU1Q7Z7A3 348 aaKnown RBP11.35□□□□□ -0.59
CPNE9-201ENST00000273027 ADGRA1Q86SQ6 560 aa11.35□□□□□ -0.59
CPNE9-201ENST00000273027 CCDC82Q8N4S0 544 aa11.35□□□□□ -0.59
CPNE9-201ENST00000273027 HNRNPLLQ8WVV9 542 aaKnown RBP11.35□□□□□ -0.59
CPNE9-201ENST00000273027 PKNOX2Q96KN3 472 aa11.35□□□□□ -0.59
CPNE9-201ENST00000273027 THAP9Q9H5L6 903 aa11.35□□□□□ -0.59
CPNE9-201ENST00000273027 GBA2Q9HCG7 927 aaPredicted RBP11.35□□□□□ -0.59
CPNE9-201ENST00000273027 SAMSN1Q9NSI8 373 aaKnown RBP11.35□□□□□ -0.59
CPNE9-201ENST00000273027 COL1A1P02452 1464 aaPredicted RBP11.35□□□□□ -0.59
CPNE9-201ENST00000273027 NAV1Q8NEY1 1877 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 CCDC194A0A1B0GVG4 234 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 CCDC151A5D8V7 595 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 SPDYE4A6NLX3 237 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 SLC26A4O43511 780 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 ERLIN1O75477 346 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 AFMP43652 599 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 GRIN1Q05586 938 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 PPP2R3AQ06190 1150 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 WHAMMP3Q1A5X7 153 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 SPECC1Q5M775 1068 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 PDXDC2PQ6P474 469 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 DPP8Q6V1X1 898 aaPredicted RBP11.34□□□□□ -0.59
CPNE9-201ENST00000273027 DTHD1Q6ZMT9 781 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 SAMD7Q7Z3H4 446 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 KRT25Q7Z3Z0 450 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 SRGAP1Q7Z6B7 1085 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 MICALL2Q8IY33 904 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 SRBD1Q8N5C6 995 aaKnown RBP11.34□□□□□ -0.59
CPNE9-201ENST00000273027 EHBP1Q8NDI1 1231 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 DHTKD1Q96HY7 919 aaPredicted RBP11.34□□□□□ -0.59
CPNE9-201ENST00000273027 EPSTI1Q96J88 318 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 RPGRIP1Q96KN7 1286 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 CSRNP1Q96S65 589 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 LRRC27Q9C0I9 530 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 ARFGAP3Q9NP61 516 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 ZNHIT6Q9NWK9 470 aaKnown RBP11.34□□□□□ -0.59
CPNE9-201ENST00000273027 CDC23Q9UJX2 597 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 TAOK2Q9UL54 1235 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 ADGRG1Q9Y653 693 aa11.34□□□□□ -0.59
CPNE9-201ENST00000273027 MYH1P12882 1939 aa11.33□□□□□ -0.6
CPNE9-201ENST00000273027 ESYT2A0FGR8 921 aa11.33□□□□□ -0.6
CPNE9-201ENST00000273027 N4BP3O15049 544 aa11.33□□□□□ -0.6
CPNE9-201ENST00000273027 RHOBTB3O94955 611 aa11.33□□□□□ -0.6
CPNE9-201ENST00000273027 PLEKHA8P1O95397 391 aa11.33□□□□□ -0.6
CPNE9-201ENST00000273027 FGFR1OPO95684 399 aaKnown RBP11.33□□□□□ -0.6
CPNE9-201ENST00000273027 RPN1P04843 607 aaKnown RBP11.33□□□□□ -0.6
CPNE9-201ENST00000273027 GNA11P29992 359 aa11.33□□□□□ -0.6
CPNE9-201ENST00000273027 DNM2P50570 870 aa11.33□□□□□ -0.6
CPNE9-201ENST00000273027 CLCN6P51797 869 aa11.33□□□□□ -0.6
CPNE9-201ENST00000273027 DYNLL1P63167 89 aaKnown RBP11.33□□□□□ -0.6
CPNE9-201ENST00000273027 TERF2Q15554 542 aa11.33□□□□□ -0.6
CPNE9-201ENST00000273027 ZNF174Q15697 407 aa11.33□□□□□ -0.6
CPNE9-201ENST00000273027 TBC1D10BQ4KMP7 808 aaPredicted RBP11.33□□□□□ -0.6
CPNE9-201ENST00000273027 RBM26Q5T8P6 1007 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms