RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 MAN1B1Q9UKM7 699 aa17.33■□□□□ 0.37
SF3B4-201ENST00000271628 NFKBIEO00221 500 aa17.33■□□□□ 0.36
SF3B4-201ENST00000271628 OR52Z1P0C646 297 aa17.33■□□□□ 0.36
SF3B4-201ENST00000271628 MORC3Q14149 939 aa17.33■□□□□ 0.36
SF3B4-201ENST00000271628 E2F4Q16254 413 aa17.33■□□□□ 0.36
SF3B4-201ENST00000271628 SGIP1Q9BQI5 828 aa17.33■□□□□ 0.36
SF3B4-201ENST00000271628 TMEM60Q9H2L4 133 aa17.33■□□□□ 0.36
SF3B4-201ENST00000271628 BCS1LQ9Y276 419 aa17.33■□□□□ 0.36
SF3B4-201ENST00000271628 PPP1R11O60927 126 aaPredicted RBP17.32■□□□□ 0.36
SF3B4-201ENST00000271628 NDUFB10O96000 172 aa17.32■□□□□ 0.36
SF3B4-201ENST00000271628 PRR29P0C7W0 189 aa17.32■□□□□ 0.36
SF3B4-201ENST00000271628 BMP3P12645 472 aa17.32■□□□□ 0.36
SF3B4-201ENST00000271628 PTGS1P23219 599 aa17.32■□□□□ 0.36
SF3B4-201ENST00000271628 CLK2P49760 499 aaKnown RBP17.32■□□□□ 0.36
SF3B4-201ENST00000271628 MYL5Q02045 173 aa17.32■□□□□ 0.36
SF3B4-201ENST00000271628 CCDC186Q7Z3E2 898 aa17.32■□□□□ 0.36
SF3B4-201ENST00000271628 CCSER1Q9C0I3 900 aa17.32■□□□□ 0.36
SF3B4-201ENST00000271628 PSTPIP2Q9H939 334 aa17.32■□□□□ 0.36
SF3B4-201ENST00000271628 ARFGEF1Q9Y6D6 1849 aa17.32■□□□□ 0.36
SF3B4-201ENST00000271628 UBA7P41226 1012 aa17.32■□□□□ 0.36
SF3B4-201ENST00000271628 RRP1BQ14684 758 aaKnown RBP17.32■□□□□ 0.36
SF3B4-201ENST00000271628 NCAPHQ15003 741 aa17.32■□□□□ 0.36
SF3B4-201ENST00000271628 QRICH1Q2TAL8 776 aa17.32■□□□□ 0.36
SF3B4-201ENST00000271628 MCTP2Q6DN12 878 aa17.32■□□□□ 0.36
SF3B4-201ENST00000271628 AFMP43652 599 aa17.31■□□□□ 0.36
SF3B4-201ENST00000271628 ZNF280AP59817 542 aaPredicted RBP17.31■□□□□ 0.36
SF3B4-201ENST00000271628 JAG1P78504 1218 aa17.31■□□□□ 0.36
SF3B4-201ENST00000271628 GRAMD1CQ8IYS0 662 aa17.31■□□□□ 0.36
SF3B4-201ENST00000271628 NAP1L4Q99733 375 aaKnown RBP17.31■□□□□ 0.36
SF3B4-201ENST00000271628 DISC1Q9NRI5 854 aa17.31■□□□□ 0.36
SF3B4-201ENST00000271628 TMEM260Q9NX78 707 aa17.31■□□□□ 0.36
SF3B4-201ENST00000271628 TMX2Q9Y320 296 aa17.31■□□□□ 0.36
SF3B4-201ENST00000271628 PCDHA1Q9Y5I3 950 aa17.31■□□□□ 0.36
SF3B4-201ENST00000271628 BMP6P22004 513 aa17.3■□□□□ 0.36
SF3B4-201ENST00000271628 MAP3K10Q02779 954 aa17.3■□□□□ 0.36
SF3B4-201ENST00000271628 DPYDQ12882 1025 aa17.3■□□□□ 0.36
SF3B4-201ENST00000271628 TRAF1Q13077 416 aa17.3■□□□□ 0.36
SF3B4-201ENST00000271628 TNFAIP1Q13829 316 aa17.3■□□□□ 0.36
SF3B4-201ENST00000271628 CDC37Q16543 378 aaPredicted RBP17.3■□□□□ 0.36
SF3B4-201ENST00000271628 NBPF9Q3BBW0 867 aa17.3■□□□□ 0.36
SF3B4-201ENST00000271628 BTNL9Q6UXG8 535 aa17.3■□□□□ 0.36
SF3B4-201ENST00000271628 AMNQ9BXJ7 453 aa17.3■□□□□ 0.36
SF3B4-201ENST00000271628 TMEM39BQ9GZU3 492 aa17.3■□□□□ 0.36
SF3B4-201ENST00000271628 GOPCQ9HD26 462 aa17.3■□□□□ 0.36
SF3B4-201ENST00000271628 IKQ13123 557 aaPredicted RBP17.3■□□□□ 0.36
SF3B4-201ENST00000271628 PPP4R3AQ6IN85 833 aa17.3■□□□□ 0.36
SF3B4-201ENST00000271628 PDXDC2PQ6P474 469 aa17.3■□□□□ 0.36
SF3B4-201ENST00000271628 DPF2Q92785 391 aa17.3■□□□□ 0.36
SF3B4-201ENST00000271628 SH2D4AQ9H788 454 aa17.3■□□□□ 0.36
SF3B4-201ENST00000271628 ZBTB21Q9ULJ3 1066 aa17.3■□□□□ 0.36
SF3B4-201ENST00000271628 A0A1W2PRG0 241 aa17.29■□□□□ 0.36
SF3B4-201ENST00000271628 TMEM232C9JQI7 657 aa17.29■□□□□ 0.36
SF3B4-201ENST00000271628 MYL1P05976 194 aa17.29■□□□□ 0.36
SF3B4-201ENST00000271628 STAT6P42226 847 aa17.29■□□□□ 0.36
SF3B4-201ENST00000271628 SYDE2Q5VT97 1194 aa17.29■□□□□ 0.36
SF3B4-201ENST00000271628 RASSF8Q8NHQ8 419 aa17.29■□□□□ 0.36
SF3B4-201ENST00000271628 ERCC5P28715 1186 aaPredicted RBP17.28■□□□□ 0.36
SF3B4-201ENST00000271628 RRAGBQ5VZM2 374 aa17.28■□□□□ 0.36
SF3B4-201ENST00000271628 RAB34Q9BZG1 259 aa17.28■□□□□ 0.36
SF3B4-201ENST00000271628 CUEDC2Q9H467 287 aa17.28■□□□□ 0.36
SF3B4-201ENST00000271628 MAGEF1Q9HAY2 307 aa17.28■□□□□ 0.36
SF3B4-201ENST00000271628 PGAP2Q9UHJ9 254 aa17.28■□□□□ 0.36
SF3B4-201ENST00000271628 GTPBP6O43824 516 aaPredicted RBP17.28■□□□□ 0.36
SF3B4-201ENST00000271628 GCFC2P16383 781 aaKnown RBP17.28■□□□□ 0.36
SF3B4-201ENST00000271628 CDC25AP30304 524 aa17.28■□□□□ 0.36
SF3B4-201ENST00000271628 CAP2P40123 477 aa17.28■□□□□ 0.36
SF3B4-201ENST00000271628 KARSQ15046 597 aaKnown RBP17.28■□□□□ 0.36
SF3B4-201ENST00000271628 CALCRLQ16602 461 aa17.28■□□□□ 0.36
SF3B4-201ENST00000271628 FBXO11Q86XK2 927 aa17.28■□□□□ 0.36
SF3B4-201ENST00000271628 TEX2Q8IWB9 1127 aa17.28■□□□□ 0.36
SF3B4-201ENST00000271628 ENOX1Q8TC92 643 aaKnown RBP17.28■□□□□ 0.36
SF3B4-201ENST00000271628 MTMR9Q96QG7 549 aa17.28■□□□□ 0.36
SF3B4-201ENST00000271628 RMND1Q9NWS8 449 aa17.28■□□□□ 0.36
SF3B4-201ENST00000271628 FZD9O00144 591 aa17.27■□□□□ 0.36
SF3B4-201ENST00000271628 ASNSP08243 561 aa17.27■□□□□ 0.36
SF3B4-201ENST00000271628 STAT2P52630 851 aa17.27■□□□□ 0.36
SF3B4-201ENST00000271628 SEMA3FQ13275 785 aa17.27■□□□□ 0.36
SF3B4-201ENST00000271628 UBE2SQ16763 222 aa17.27■□□□□ 0.36
SF3B4-201ENST00000271628 TMEM266Q2M3C6 531 aa17.27■□□□□ 0.36
SF3B4-201ENST00000271628 NUP88Q99567 741 aaPredicted RBP17.27■□□□□ 0.36
SF3B4-201ENST00000271628 ECE1P42892 770 aa17.27■□□□□ 0.35
SF3B4-201ENST00000271628 AP3B2Q13367 1082 aa17.27■□□□□ 0.35
SF3B4-201ENST00000271628 PDIA5Q14554 519 aa17.27■□□□□ 0.35
SF3B4-201ENST00000271628 MIGA2Q7L4E1 593 aa17.27■□□□□ 0.35
SF3B4-201ENST00000271628 CABP7Q86V35 215 aa17.27■□□□□ 0.35
SF3B4-201ENST00000271628 IGSF22Q8N9C0 903 aa17.27■□□□□ 0.35
SF3B4-201ENST00000271628 NRBP1Q9UHY1 535 aa17.27■□□□□ 0.35
SF3B4-201ENST00000271628 LMOD1P29536 600 aaPredicted RBP17.26■□□□□ 0.35
SF3B4-201ENST00000271628 TECP42680 631 aa17.26■□□□□ 0.35
SF3B4-201ENST00000271628 PTGER2P43116 358 aa17.26■□□□□ 0.35
SF3B4-201ENST00000271628 FXR2P51116 673 aaKnown RBP eCLIP17.26■□□□□ 0.35
SF3B4-201ENST00000271628 USP11P51784 963 aa17.26■□□□□ 0.35
SF3B4-201ENST00000271628 RASA3Q14644 834 aa17.26■□□□□ 0.35
SF3B4-201ENST00000271628 POTEDQ86YR6 584 aa17.26■□□□□ 0.35
SF3B4-201ENST00000271628 CHURC1Q8WUH1 139 aa17.26■□□□□ 0.35
SF3B4-201ENST00000271628 CBFA2T2O43439 604 aa17.25■□□□□ 0.35
SF3B4-201ENST00000271628 TXKP42681 527 aa17.25■□□□□ 0.35
SF3B4-201ENST00000271628 HSD3B7Q9H2F3 369 aa17.25■□□□□ 0.35
SF3B4-201ENST00000271628 VCPKMTQ9H867 229 aa17.25■□□□□ 0.35
SF3B4-201ENST00000271628 IMPACTQ9P2X3 320 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms