RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 UTP14CQ5TAP6 766 aaKnown RBP17.03■□□□□ 0.32
TIMP3-201ENST00000266085 LRCH2Q5VUJ6 765 aa17.03■□□□□ 0.32
TIMP3-201ENST00000266085 METTL13Q8N6R0 699 aa17.03■□□□□ 0.32
TIMP3-201ENST00000266085 MAGEF1Q9HAY2 307 aa17.03■□□□□ 0.32
TIMP3-201ENST00000266085 DCP1AQ9NPI6 582 aaPredicted RBP17.03■□□□□ 0.32
TIMP3-201ENST00000266085 CD19P15391 556 aa17.03■□□□□ 0.32
TIMP3-201ENST00000266085 NT5C2P49902 561 aa17.03■□□□□ 0.32
TIMP3-201ENST00000266085 STAT2P52630 851 aa17.03■□□□□ 0.32
TIMP3-201ENST00000266085 SLC44A5Q8NCS7 719 aa17.03■□□□□ 0.32
TIMP3-201ENST00000266085 PAIP2Q9BPZ3 127 aaKnown RBP17.03■□□□□ 0.32
TIMP3-201ENST00000266085 SUGCTQ9HAC7 445 aa17.03■□□□□ 0.32
TIMP3-201ENST00000266085 GJB4Q9NTQ9 266 aa17.03■□□□□ 0.32
TIMP3-201ENST00000266085 TRPC6Q9Y210 931 aa17.03■□□□□ 0.32
TIMP3-201ENST00000266085 PLEKHA8P1O95397 391 aa17.03■□□□□ 0.32
TIMP3-201ENST00000266085 ARHGAP44Q17R89 818 aa17.03■□□□□ 0.32
TIMP3-201ENST00000266085 TYW1BQ6NUM6 668 aa17.03■□□□□ 0.32
TIMP3-201ENST00000266085 HDXQ7Z353 690 aa17.03■□□□□ 0.32
TIMP3-201ENST00000266085 UBL4BQ8N7F7 174 aa17.03■□□□□ 0.32
TIMP3-201ENST00000266085 SLC5A4Q9NY91 659 aa17.03■□□□□ 0.32
TIMP3-201ENST00000266085 STAMBPO95630 424 aa17.03■□□□□ 0.32
TIMP3-201ENST00000266085 CUEDC2Q9H467 287 aa17.03■□□□□ 0.32
TIMP3-201ENST00000266085 GH2P01242 217 aa17.02■□□□□ 0.32
TIMP3-201ENST00000266085 STAT1P42224 750 aa17.02■□□□□ 0.32
TIMP3-201ENST00000266085 USP14P54578 494 aa17.02■□□□□ 0.32
TIMP3-201ENST00000266085 TOB2Q14106 344 aaPredicted RBP17.02■□□□□ 0.32
TIMP3-201ENST00000266085 ZBTB9Q96C00 473 aa17.02■□□□□ 0.32
TIMP3-201ENST00000266085 NSRP1Q9H0G5 558 aaKnown RBP17.02■□□□□ 0.32
TIMP3-201ENST00000266085 KRT19P08727 400 aa17.02■□□□□ 0.32
TIMP3-201ENST00000266085 CAPN2P17655 700 aa17.02■□□□□ 0.32
TIMP3-201ENST00000266085 EN1Q05925 392 aaPredicted RBP17.02■□□□□ 0.32
TIMP3-201ENST00000266085 AK8Q96MA6 479 aa17.02■□□□□ 0.32
TIMP3-201ENST00000266085 TIGD1Q96MW7 591 aa17.02■□□□□ 0.32
TIMP3-201ENST00000266085 MAK16Q9BXY0 300 aaKnown RBP17.02■□□□□ 0.32
TIMP3-201ENST00000266085 TRERF1Q96PN7 1200 aa17.02■□□□□ 0.31
TIMP3-201ENST00000266085 TERF1P54274 439 aa17.01■□□□□ 0.31
TIMP3-201ENST00000266085 LRMPQ12912 555 aa17.01■□□□□ 0.31
TIMP3-201ENST00000266085 KCTD2Q14681 263 aa17.01■□□□□ 0.31
TIMP3-201ENST00000266085 GOLGA5Q8TBA6 731 aa17.01■□□□□ 0.31
TIMP3-201ENST00000266085 SREK1Q8WXA9 508 aaKnown RBP17.01■□□□□ 0.31
TIMP3-201ENST00000266085 DIP2AQ14689 1571 aa17.01■□□□□ 0.31
TIMP3-201ENST00000266085 ACTN4O43707 911 aaKnown RBP17.01■□□□□ 0.31
TIMP3-201ENST00000266085 GCFC2P16383 781 aaKnown RBP17.01■□□□□ 0.31
TIMP3-201ENST00000266085 ATP2A2P16615 1042 aaKnown RBP17.01■□□□□ 0.31
TIMP3-201ENST00000266085 SYDE2Q5VT97 1194 aa17.01■□□□□ 0.31
TIMP3-201ENST00000266085 RABGAP1Q9Y3P9 1069 aa17.01■□□□□ 0.31
TIMP3-201ENST00000266085 SPATA31A6Q5VVP1 1343 aa17.01■□□□□ 0.31
TIMP3-201ENST00000266085 SMIM23A6NLE4 172 aa17.01■□□□□ 0.31
TIMP3-201ENST00000266085 hCG_1984214I3L0E3 225 aa17.01■□□□□ 0.31
TIMP3-201ENST00000266085 RESTQ13127 1097 aa17.01■□□□□ 0.31
TIMP3-201ENST00000266085 ZNF34Q8IZ26 560 aa17.01■□□□□ 0.31
TIMP3-201ENST00000266085 ZNF713Q8N859 430 aaPredicted RBP17.01■□□□□ 0.31
TIMP3-201ENST00000266085 AGTPBP1Q9UPW5 1226 aa17.01■□□□□ 0.31
TIMP3-201ENST00000266085 FAM196BA6NMK8 535 aa17.01■□□□□ 0.31
TIMP3-201ENST00000266085 CEP104O60308 925 aa17.01■□□□□ 0.31
TIMP3-201ENST00000266085 TAF12Q16514 161 aa17.01■□□□□ 0.31
TIMP3-201ENST00000266085 LARP4BQ92615 738 aaKnown RBP17.01■□□□□ 0.31
TIMP3-201ENST00000266085 PSMB7Q99436 277 aa17.01■□□□□ 0.31
TIMP3-201ENST00000266085 PCDHB6Q9Y5E3 794 aa17.01■□□□□ 0.31
TIMP3-201ENST00000266085 K7ENM7 598 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 GPSM2P81274 684 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 AOC3Q16853 763 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 DCUN1D2Q6PH85 259 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 TMEM179Q6ZVK1 233 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 PLA2G12BQ9BX93 195 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 TECPR2O15040 1411 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 NEDD4P46934 1319 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 ECE2O60344 883 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 CAMTA2O94983 1202 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 ERCC5P28715 1186 aaPredicted RBP17■□□□□ 0.31
TIMP3-201ENST00000266085 TMED8Q6PL24 325 aaPredicted RBP17■□□□□ 0.31
TIMP3-201ENST00000266085 GJA10Q969M2 543 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 BEGAINQ9BUH8 593 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 METTL14Q9HCE5 456 aaKnown RBP17■□□□□ 0.31
TIMP3-201ENST00000266085 VPS18Q9P253 973 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 TXNDC16Q9P2K2 825 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 ASNSP08243 561 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 RC3H1Q5TC82 1133 aaKnown RBP17■□□□□ 0.31
TIMP3-201ENST00000266085 ZNF365Q70YC5 407 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 CYB5R4Q7L1T6 521 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 SPC25Q9HBM1 224 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 A0A087WWV3 80 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 GSG1L2A8MUP6 293 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 RPS6KA1Q15418 735 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 ODR4Q5SWX8 454 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 TMEM47Q9BQJ4 181 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 ZNF577Q9BSK1 485 aa17■□□□□ 0.31
TIMP3-201ENST00000266085 SLFN14P0C7P3 912 aa16.99■□□□□ 0.31
TIMP3-201ENST00000266085 SNX16P57768 344 aa16.99■□□□□ 0.31
TIMP3-201ENST00000266085 DNAJC21Q5F1R6 531 aaKnown RBP16.99■□□□□ 0.31
TIMP3-201ENST00000266085 TMTC3Q6ZXV5 915 aa16.99■□□□□ 0.31
TIMP3-201ENST00000266085 PEX26Q7Z412 305 aa16.99■□□□□ 0.31
TIMP3-201ENST00000266085 LSM14BQ9BX40 385 aaKnown RBP16.99■□□□□ 0.31
TIMP3-201ENST00000266085 CPVLQ9H3G5 476 aa16.99■□□□□ 0.31
TIMP3-201ENST00000266085 TSKSQ9UJT2 592 aa16.99■□□□□ 0.31
TIMP3-201ENST00000266085 ADAM9Q13443 819 aa16.99■□□□□ 0.31
TIMP3-201ENST00000266085 ITPK1Q13572 414 aa16.99■□□□□ 0.31
TIMP3-201ENST00000266085 CDC37Q16543 378 aaPredicted RBP16.99■□□□□ 0.31
TIMP3-201ENST00000266085 UBE2SQ16763 222 aa16.99■□□□□ 0.31
TIMP3-201ENST00000266085 FAM47CQ5HY64 1035 aa16.99■□□□□ 0.31
TIMP3-201ENST00000266085 SYCE1Q8N0S2 351 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms