RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 PPP2R5EQ16537 467 aa18.5■□□□□ 0.55
CROCCP3-201ENST00000263511 PCDHA7Q9UN72 937 aa18.5■□□□□ 0.55
CROCCP3-201ENST00000263511 ARHGEF5Q12774 1597 aa18.5■□□□□ 0.55
CROCCP3-201ENST00000263511 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.5■□□□□ 0.55
CROCCP3-201ENST00000263511 ZWINTO95229 277 aa18.5■□□□□ 0.55
CROCCP3-201ENST00000263511 PPM1KQ8N3J5 372 aa18.5■□□□□ 0.55
CROCCP3-201ENST00000263511 P3H4Q92791 437 aa18.5■□□□□ 0.55
CROCCP3-201ENST00000263511 SYMPKQ92797 1274 aaKnown RBP18.5■□□□□ 0.55
CROCCP3-201ENST00000263511 HAUS1Q96CS2 278 aa18.5■□□□□ 0.55
CROCCP3-201ENST00000263511 DBNDD1Q9H9R9 158 aa18.5■□□□□ 0.55
CROCCP3-201ENST00000263511 ZNF277Q9NRM2 450 aaPredicted RBP18.5■□□□□ 0.55
CROCCP3-201ENST00000263511 ADD3Q9UEY8 706 aaKnown RBP18.5■□□□□ 0.55
CROCCP3-201ENST00000263511 NEDD9Q14511 834 aa18.5■□□□□ 0.55
CROCCP3-201ENST00000263511 ODR4Q5SWX8 454 aa18.5■□□□□ 0.55
CROCCP3-201ENST00000263511 CUEDC2Q9H467 287 aa18.5■□□□□ 0.55
CROCCP3-201ENST00000263511 SERPINB13Q9UIV8 391 aa18.5■□□□□ 0.55
CROCCP3-201ENST00000263511 IFNB1P01574 187 aa18.5■□□□□ 0.55
CROCCP3-201ENST00000263511 PPP2R5CQ13362 524 aa18.5■□□□□ 0.55
CROCCP3-201ENST00000263511 DHX36Q9H2U1 1008 aaKnown RBP18.5■□□□□ 0.55
CROCCP3-201ENST00000263511 XPOTO43592 962 aaKnown RBP18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 LSG1Q9H089 658 aaKnown RBP18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 RIC8AQ9NPQ8 531 aa18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 KIAA1024Q9UPX6 916 aa18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 ERBB3P21860 1342 aa18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 RIOK3O14730 519 aaKnown RBP18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 ABL1P00519 1130 aa18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 POMGNT1Q8WZA1 660 aa18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 UGGT1Q9NYU2 1555 aa18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 USP6P35125 1406 aa18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 RBM6P78332 1123 aaKnown RBP18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 GRK7Q8WTQ7 553 aa18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 FOXP1Q9H334 677 aaPredicted RBP18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 TMEM63CQ9P1W3 806 aa18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 ANKFY1Q9P2R3 1169 aa18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 PCDHA4Q9UN74 947 aa18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 RGS12O14924 1447 aa18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 ANKARQ7Z5J8 1434 aa18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 hCG_1984214I3L0E3 225 aa18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 SCRN1Q12765 414 aa18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 SPATA1Q5VX52 437 aa18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 DENND2CQ68D51 928 aa18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 NLRP10Q86W26 655 aa18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 ZNF713Q8N859 430 aaPredicted RBP18.49■□□□□ 0.55
CROCCP3-201ENST00000263511 CCDC93Q567U6 631 aa18.48■□□□□ 0.55
CROCCP3-201ENST00000263511 APOA5Q6Q788 366 aa18.48■□□□□ 0.55
CROCCP3-201ENST00000263511 CLIC6Q96NY7 704 aa18.48■□□□□ 0.55
CROCCP3-201ENST00000263511 RPS6KC1Q96S38 1066 aa18.48■□□□□ 0.55
CROCCP3-201ENST00000263511 TACC3Q9Y6A5 838 aa18.48■□□□□ 0.55
CROCCP3-201ENST00000263511 OATP04181 439 aa18.48■□□□□ 0.55
CROCCP3-201ENST00000263511 POLR2FP61218 127 aaKnown RBP18.48■□□□□ 0.55
CROCCP3-201ENST00000263511 RSPH3Q86UC2 560 aa18.48■□□□□ 0.55
CROCCP3-201ENST00000263511 SESTD1Q86VW0 696 aa18.48■□□□□ 0.55
CROCCP3-201ENST00000263511 MYRIPQ8NFW9 859 aa18.48■□□□□ 0.55
CROCCP3-201ENST00000263511 GCFC2P16383 781 aaKnown RBP18.48■□□□□ 0.55
CROCCP3-201ENST00000263511 MAN1A1P33908 653 aa18.48■□□□□ 0.55
CROCCP3-201ENST00000263511 ZNF827Q17R98 1081 aa18.48■□□□□ 0.55
CROCCP3-201ENST00000263511 TTC31Q49AM3 519 aaPredicted RBP18.48■□□□□ 0.55
CROCCP3-201ENST00000263511 SLC7A3Q8WY07 619 aa18.48■□□□□ 0.55
CROCCP3-201ENST00000263511 ZNF577Q9BSK1 485 aa18.48■□□□□ 0.55
CROCCP3-201ENST00000263511 SOS2Q07890 1332 aaPredicted RBP18.48■□□□□ 0.55
CROCCP3-201ENST00000263511 ADD2P35612 726 aa18.48■□□□□ 0.55
CROCCP3-201ENST00000263511 GKAP1Q5VSY0 366 aaPredicted RBP18.48■□□□□ 0.55
CROCCP3-201ENST00000263511 CTAGE3PQ8IX95 158 aa18.48■□□□□ 0.55
CROCCP3-201ENST00000263511 GJA10Q969M2 543 aa18.48■□□□□ 0.55
CROCCP3-201ENST00000263511 TLR7Q9NYK1 1049 aaKnown RBP18.48■□□□□ 0.55
CROCCP3-201ENST00000263511 DYNLL1P63167 89 aaKnown RBP18.47■□□□□ 0.55
CROCCP3-201ENST00000263511 PPFIA1Q13136 1202 aa18.47■□□□□ 0.55
CROCCP3-201ENST00000263511 CEP85LQ5SZL2 805 aa18.47■□□□□ 0.55
CROCCP3-201ENST00000263511 CCDC62Q6P9F0 684 aa18.47■□□□□ 0.55
CROCCP3-201ENST00000263511 SEPT9Q9UHD8 586 aaPredicted RBP18.47■□□□□ 0.55
CROCCP3-201ENST00000263511 HYOU1Q9Y4L1 999 aa18.47■□□□□ 0.55
CROCCP3-201ENST00000263511 HNRNPDLO14979 420 aaKnown RBP18.47■□□□□ 0.55
CROCCP3-201ENST00000263511 ELF2Q15723 593 aa18.47■□□□□ 0.55
CROCCP3-201ENST00000263511 VSIG1Q86XK7 387 aa18.47■□□□□ 0.55
CROCCP3-201ENST00000263511 WDR11Q9BZH6 1224 aa18.47■□□□□ 0.55
CROCCP3-201ENST00000263511 KCNK3O14649 394 aa18.47■□□□□ 0.55
CROCCP3-201ENST00000263511 TLR3O15455 904 aaKnown RBP18.47■□□□□ 0.55
CROCCP3-201ENST00000263511 FMNL1O95466 1100 aaPredicted RBP18.47■□□□□ 0.55
CROCCP3-201ENST00000263511 H2AFZP0C0S5 128 aa18.47■□□□□ 0.55
CROCCP3-201ENST00000263511 H2AFVQ71UI9 128 aa18.47■□□□□ 0.55
CROCCP3-201ENST00000263511 PALM2Q8IXS6 379 aa18.47■□□□□ 0.55
CROCCP3-201ENST00000263511 AK8Q96MA6 479 aa18.47■□□□□ 0.55
CROCCP3-201ENST00000263511 AP5M1Q9H0R1 490 aa18.47■□□□□ 0.55
CROCCP3-201ENST00000263511 RASSF4Q9H2L5 321 aa18.47■□□□□ 0.55
CROCCP3-201ENST00000263511 DDX41Q9UJV9 622 aaKnown RBP18.47■□□□□ 0.55
CROCCP3-201ENST00000263511 KRT71Q3SY84 523 aa18.47■□□□□ 0.55
CROCCP3-201ENST00000263511 C10orf67Q8IYJ2 551 aa18.47■□□□□ 0.55
CROCCP3-201ENST00000263511 BMP3P12645 472 aa18.46■□□□□ 0.55
CROCCP3-201ENST00000263511 BPIFB4P59827 614 aa18.46■□□□□ 0.55
CROCCP3-201ENST00000263511 ATP11AP98196 1134 aa18.46■□□□□ 0.55
CROCCP3-201ENST00000263511 ARMC9Q7Z3E5 817 aa18.46■□□□□ 0.55
CROCCP3-201ENST00000263511 WHAMMP3Q1A5X7 153 aa18.46■□□□□ 0.55
CROCCP3-201ENST00000263511 KCTD1Q719H9 257 aa18.46■□□□□ 0.55
CROCCP3-201ENST00000263511 LARP4BQ92615 738 aaKnown RBP18.46■□□□□ 0.55
CROCCP3-201ENST00000263511 CDHR1Q96JP9 859 aa18.46■□□□□ 0.55
CROCCP3-201ENST00000263511 NUB1Q9Y5A7 615 aa18.46■□□□□ 0.55
CROCCP3-201ENST00000263511 HEG1Q9ULI3 1381 aa18.46■□□□□ 0.55
CROCCP3-201ENST00000263511 A0A1W2PQ27 194 aa18.46■□□□□ 0.55
CROCCP3-201ENST00000263511 A0A1W2PQ64 194 aa18.46■□□□□ 0.55
CROCCP3-201ENST00000263511 A0A1W2PQD8 194 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms