RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 SNX14Q9Y5W7 946 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 LARGE1O95461 756 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 TFRCP02786 760 aaKnown RBP9.25□□□□□ -0.93
LDB3-201ENST00000263066 TSNAXIP1Q2TAA8 658 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 Q4G0T1 1027 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 BZW1Q7L1Q6 419 aaKnown RBP9.25□□□□□ -0.93
LDB3-201ENST00000263066 HNRNPLLQ8WVV9 542 aaKnown RBP9.25□□□□□ -0.93
LDB3-201ENST00000263066 BORCS6Q96GS4 357 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 MXD3Q9BW11 206 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 HELLSQ9NRZ9 838 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 PAG1Q9NWQ8 432 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 LMCD1Q9NZU5 365 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 SHANK3Q9BYB0 1731 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 RGS12O14924 1447 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 VWA3AA6NCI4 1184 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 AKR1B15C9JRZ8 316 aaPredicted RBP9.25□□□□□ -0.93
LDB3-201ENST00000263066 FSBPO95073 299 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 PCCAP05165 728 aaPredicted RBP9.25□□□□□ -0.93
LDB3-201ENST00000263066 VIMP08670 466 aaKnown RBP9.25□□□□□ -0.93
LDB3-201ENST00000263066 RSRC2Q7L4I2 434 aaKnown RBP9.25□□□□□ -0.93
LDB3-201ENST00000263066 NOA1Q8NC60 698 aaKnown RBP9.25□□□□□ -0.93
LDB3-201ENST00000263066 CUL5Q93034 780 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 FGD4Q96M96 766 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 VCX3BQ9H321 246 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 ARMT1Q9H993 441 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 VCX3AQ9NNX9 186 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 MCM9Q9NXL9 1143 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 SLC4A4Q9Y6R1 1079 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 DCCP43146 1447 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 ROR2Q01974 943 aaKnown RBP9.24□□□□□ -0.93
LDB3-201ENST00000263066 SLMAPQ14BN4 828 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 SEPT7Q16181 437 aaKnown RBP9.24□□□□□ -0.93
LDB3-201ENST00000263066 MUM1Q2TAK8 710 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 INTS5Q6P9B9 1019 aaKnown RBP9.24□□□□□ -0.93
LDB3-201ENST00000263066 NANOGNBQ7Z5D8 188 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 TMEM110Q86TL2 294 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 SIRT2Q8IXJ6 389 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 MORC4Q8TE76 937 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 ZNF473Q8WTR7 871 aaKnown RBP9.24□□□□□ -0.93
LDB3-201ENST00000263066 HVCN1Q96D96 273 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 CCT8L2Q96SF2 557 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 SPON1Q9HCB6 807 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 HPCAL4Q9UM19 191 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 OPLAHO14841 1288 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 COQ9O75208 318 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 LDHBP07195 334 aaKnown RBP9.24□□□□□ -0.93
LDB3-201ENST00000263066 GUCY2FP51841 1108 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 TUBB2AQ13885 445 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 NAA35Q5VZE5 725 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 ZNF804AQ7Z570 1209 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 NLRP14Q86W24 1093 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 MAPKAPK5Q8IW41 473 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 TUBB2BQ9BVA1 445 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 ANKZF1Q9H8Y5 726 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 SAMD15Q9P1V8 674 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 ZFATQ9P243 1243 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 TTF2Q9UNY4 1162 aaKnown RBP9.24□□□□□ -0.93
LDB3-201ENST00000263066 LUC7L2Q9Y383 392 aaKnown RBP9.24□□□□□ -0.93
LDB3-201ENST00000263066 N4BP2Q86UW6 1770 aaPredicted RBP9.24□□□□□ -0.93
LDB3-201ENST00000263066 AHCYL1O43865 530 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 MYL1P05976 194 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 MAGEA8P43361 318 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 IGBP1P78318 339 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 HDLBPQ00341 1268 aaKnown RBP9.24□□□□□ -0.93
LDB3-201ENST00000263066 NMIQ13287 307 aaPredicted RBP9.24□□□□□ -0.93
LDB3-201ENST00000263066 SH2D4BQ5SQS7 431 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 RASEFQ8IZ41 740 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 FUKQ8N0W3 1084 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 TRIM11Q96F44 468 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 SELENOSQ9BQE4 189 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 KIF24Q5T7B8 1368 aa9.24□□□□□ -0.93
LDB3-201ENST00000263066 SOWAHDA6NJG2 315 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 GJA8P48165 433 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 ME3Q16798 604 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 AOC3Q16853 763 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 PRR5LQ6MZQ0 368 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 TRIM65Q6PJ69 517 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 Q6ZUG5 572 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 ANKRD23Q86SG2 305 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 SDR42E1Q8WUS8 393 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 USP28Q96RU2 1077 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 SLF1Q9BQI6 1058 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 CPDO75976 1380 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 TCP10L2B9ZVM9 353 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 PPEF1O14829 653 aaPredicted RBP9.23□□□□□ -0.93
LDB3-201ENST00000263066 STX10O60499 249 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 SUPT3HO75486 399 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 MBD4O95243 580 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 NR1D1P20393 614 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 PDE1CQ14123 709 aaPredicted RBP9.23□□□□□ -0.93
LDB3-201ENST00000263066 C1QTNF12Q5T7M4 302 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 PRAMEF18Q5VWM3 479 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 SLC51AQ86UW1 340 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 DHX40Q8IX18 779 aaKnown RBP9.23□□□□□ -0.93
LDB3-201ENST00000263066 RNF10Q8N5U6 811 aaKnown RBP9.23□□□□□ -0.93
LDB3-201ENST00000263066 FLAD1Q8NFF5 587 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 UBAC1Q9BSL1 405 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 TAOK3Q9H2K8 898 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 UNC45AQ9H3U1 944 aa9.23□□□□□ -0.93
LDB3-201ENST00000263066 SLC39A2Q9NP94 309 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 166.6 ms