RNA–Protein interactions for RNA: ENST00000262768.11

TIMP2-201, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP2, Length 3,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-201ENST00000262768 B4DLN1 442 aa16.93■□□□□ 0.3
TIMP2-201ENST00000262768 PABPC4Q13310 644 aaKnown RBP eCLIP16.93■□□□□ 0.3
TIMP2-201ENST00000262768 C16orf86Q6ZW13 317 aa16.93■□□□□ 0.3
TIMP2-201ENST00000262768 CAPZA3Q96KX2 299 aa16.93■□□□□ 0.3
TIMP2-201ENST00000262768 NLRC4Q9NPP4 1024 aa16.93■□□□□ 0.3
TIMP2-201ENST00000262768 COL14A1Q05707 1796 aaKnown RBP16.93■□□□□ 0.3
TIMP2-201ENST00000262768 STXBP3O00186 592 aa16.93■□□□□ 0.3
TIMP2-201ENST00000262768 GTPBP6O43824 516 aaPredicted RBP16.93■□□□□ 0.3
TIMP2-201ENST00000262768 CHMP4BP1P59074 171 aa16.93■□□□□ 0.3
TIMP2-201ENST00000262768 ERCC6LQ2NKX8 1250 aa16.93■□□□□ 0.3
TIMP2-201ENST00000262768 PRMT6Q96LA8 375 aaPredicted RBP16.93■□□□□ 0.3
TIMP2-201ENST00000262768 SH2D3AQ9BRG2 576 aa16.93■□□□□ 0.3
TIMP2-201ENST00000262768 LZTS2Q9BRK4 669 aa16.93■□□□□ 0.3
TIMP2-201ENST00000262768 IKBKBO14920 756 aa16.93■□□□□ 0.3
TIMP2-201ENST00000262768 RRP9O43818 475 aaKnown RBP16.93■□□□□ 0.3
TIMP2-201ENST00000262768 SHISA4Q96DD7 197 aa16.93■□□□□ 0.3
TIMP2-201ENST00000262768 PPP1R13BQ96KQ4 1090 aa16.93■□□□□ 0.3
TIMP2-201ENST00000262768 GSDMAQ96QA5 445 aa16.93■□□□□ 0.3
TIMP2-201ENST00000262768 PAXBP1Q9Y5B6 917 aa16.93■□□□□ 0.3
TIMP2-201ENST00000262768 SFI1A8K8P3 1242 aa16.92■□□□□ 0.3
TIMP2-201ENST00000262768 F5H6K3 240 aa16.92■□□□□ 0.3
TIMP2-201ENST00000262768 CCP110O43303 1012 aa16.92■□□□□ 0.3
TIMP2-201ENST00000262768 LONP1P36776 959 aaKnown RBP16.92■□□□□ 0.3
TIMP2-201ENST00000262768 KLRC3Q07444 240 aa16.92■□□□□ 0.3
TIMP2-201ENST00000262768 CDC37Q16543 378 aaPredicted RBP16.92■□□□□ 0.3
TIMP2-201ENST00000262768 PODNQ7Z5L7 613 aa16.92■□□□□ 0.3
TIMP2-201ENST00000262768 NIM1KQ8IY84 436 aa16.92■□□□□ 0.3
TIMP2-201ENST00000262768 RDH13Q8NBN7 331 aa16.92■□□□□ 0.3
TIMP2-201ENST00000262768 CTAGE1Q96RT6 745 aa16.92■□□□□ 0.3
TIMP2-201ENST00000262768 LUC7L2Q9Y383 392 aaKnown RBP16.92■□□□□ 0.3
TIMP2-201ENST00000262768 PKD1L3Q7Z443 1732 aa16.92■□□□□ 0.3
TIMP2-201ENST00000262768 MACROD2A1Z1Q3 448 aa16.92■□□□□ 0.3
TIMP2-201ENST00000262768 RHBDL3P58872 404 aa16.92■□□□□ 0.3
TIMP2-201ENST00000262768 NSMFQ6X4W1 530 aa16.92■□□□□ 0.3
TIMP2-201ENST00000262768 TPH2Q8IWU9 490 aa16.92■□□□□ 0.3
TIMP2-201ENST00000262768 CCDC175P0C221 793 aa16.92■□□□□ 0.3
TIMP2-201ENST00000262768 NCAPHQ15003 741 aa16.92■□□□□ 0.3
TIMP2-201ENST00000262768 QRICH1Q2TAL8 776 aa16.92■□□□□ 0.3
TIMP2-201ENST00000262768 SLIT2O94813 1529 aa16.92■□□□□ 0.3
TIMP2-201ENST00000262768 AKR1B10O60218 316 aa16.91■□□□□ 0.3
TIMP2-201ENST00000262768 DCAF17Q5H9S7 520 aaPredicted RBP16.91■□□□□ 0.3
TIMP2-201ENST00000262768 SARM1Q6SZW1 724 aa16.91■□□□□ 0.3
TIMP2-201ENST00000262768 EPC1Q9H2F5 836 aa16.91■□□□□ 0.3
TIMP2-201ENST00000262768 TUBE1Q9UJT0 475 aa16.91■□□□□ 0.3
TIMP2-201ENST00000262768 FBXO11Q86XK2 927 aa16.91■□□□□ 0.3
TIMP2-201ENST00000262768 ACRBPQ8NEB7 543 aa16.91■□□□□ 0.3
TIMP2-201ENST00000262768 FLAD1Q8NFF5 587 aa16.91■□□□□ 0.3
TIMP2-201ENST00000262768 TSG101Q99816 390 aa16.91■□□□□ 0.3
TIMP2-201ENST00000262768 PLEKHA4Q9H4M7 779 aa16.91■□□□□ 0.3
TIMP2-201ENST00000262768 IMPACTQ9P2X3 320 aa16.91■□□□□ 0.3
TIMP2-201ENST00000262768 DOT1LQ8TEK3 1739 aa16.91■□□□□ 0.3
TIMP2-201ENST00000262768 MYCLP12524 364 aaPredicted RBP16.91■□□□□ 0.3
TIMP2-201ENST00000262768 PPP4CP60510 307 aa16.91■□□□□ 0.3
TIMP2-201ENST00000262768 TOGARAM2Q6ZUX3 1019 aa16.91■□□□□ 0.3
TIMP2-201ENST00000262768 ANKRD13CQ8N6S4 541 aa16.91■□□□□ 0.3
TIMP2-201ENST00000262768 TTLL6Q8N841 843 aa16.91■□□□□ 0.3
TIMP2-201ENST00000262768 ENOX1Q8TC92 643 aaKnown RBP16.91■□□□□ 0.3
TIMP2-201ENST00000262768 CC2D2BQ6DHV5 1058 aa16.9■□□□□ 0.3
TIMP2-201ENST00000262768 VSTM4Q8IW00 320 aa16.9■□□□□ 0.3
TIMP2-201ENST00000262768 PYM1Q9BRP8 204 aaKnown RBP16.9■□□□□ 0.3
TIMP2-201ENST00000262768 PPP2R2CQ9Y2T4 447 aa16.9■□□□□ 0.3
TIMP2-201ENST00000262768 NUP98P52948 1817 aa16.9■□□□□ 0.3
TIMP2-201ENST00000262768 SLU7O95391 586 aaKnown RBP16.9■□□□□ 0.3
TIMP2-201ENST00000262768 FUT2Q10981 343 aa16.9■□□□□ 0.3
TIMP2-201ENST00000262768 KRT31Q15323 416 aa16.9■□□□□ 0.3
TIMP2-201ENST00000262768 ASPRV1Q53RT3 343 aa16.9■□□□□ 0.3
TIMP2-201ENST00000262768 SIPA1L3O60292 1781 aaPredicted RBP16.9■□□□□ 0.3
TIMP2-201ENST00000262768 E9PMD0 336 aa16.9■□□□□ 0.3
TIMP2-201ENST00000262768 ECE1P42892 770 aa16.9■□□□□ 0.3
TIMP2-201ENST00000262768 BAG6P46379 1132 aa16.9■□□□□ 0.3
TIMP2-201ENST00000262768 TRAPPC10P48553 1259 aa16.9■□□□□ 0.3
TIMP2-201ENST00000262768 CCZ1BP86790 482 aa16.9■□□□□ 0.3
TIMP2-201ENST00000262768 CCZ1P86791 482 aaPredicted RBP16.9■□□□□ 0.3
TIMP2-201ENST00000262768 USP54Q70EL1 1684 aa16.89■□□□□ 0.29
TIMP2-201ENST00000262768 ALAS1P13196 640 aa16.89■□□□□ 0.29
TIMP2-201ENST00000262768 TMEM39BQ9GZU3 492 aa16.89■□□□□ 0.29
TIMP2-201ENST00000262768 BAZ2AQ9UIF9 1905 aaKnown RBP16.89■□□□□ 0.29
TIMP2-201ENST00000262768 MYH2Q9UKX2 1941 aa16.89■□□□□ 0.29
TIMP2-201ENST00000262768 PSDA5PKW4 1024 aaPredicted RBP16.89■□□□□ 0.29
TIMP2-201ENST00000262768 SLC37A4O43826 429 aa16.89■□□□□ 0.29
TIMP2-201ENST00000262768 TTLL12Q14166 644 aaPredicted RBP16.89■□□□□ 0.29
TIMP2-201ENST00000262768 FAM83BQ5T0W9 1011 aa16.89■□□□□ 0.29
TIMP2-201ENST00000262768 GPBP1Q86WP2 473 aa16.89■□□□□ 0.29
TIMP2-201ENST00000262768 CERS3Q8IU89 383 aa16.89■□□□□ 0.29
TIMP2-201ENST00000262768 MTA3Q9BTC8 594 aa16.89■□□□□ 0.29
TIMP2-201ENST00000262768 JADE2Q9NQC1 790 aa16.89■□□□□ 0.29
TIMP2-201ENST00000262768 TFR2Q9UP52 801 aa16.89■□□□□ 0.29
TIMP2-201ENST00000262768 A0A0U1RQG5 324 aaPredicted RBP16.89■□□□□ 0.29
TIMP2-201ENST00000262768 POLR3GO15318 223 aaPredicted RBP16.89■□□□□ 0.29
TIMP2-201ENST00000262768 RHOXF2BP0C7M4 288 aa16.89■□□□□ 0.29
TIMP2-201ENST00000262768 COPB1P53618 953 aaKnown RBP16.89■□□□□ 0.29
TIMP2-201ENST00000262768 SPAG1Q07617 926 aa16.89■□□□□ 0.29
TIMP2-201ENST00000262768 ZNF397Q8NF99 534 aaPredicted RBP16.89■□□□□ 0.29
TIMP2-201ENST00000262768 RHOXF2Q9BQY4 288 aa16.89■□□□□ 0.29
TIMP2-201ENST00000262768 FZD1Q9UP38 647 aa16.89■□□□□ 0.29
TIMP2-201ENST00000262768 PALM3A6NDB9 673 aaPredicted RBP16.88■□□□□ 0.29
TIMP2-201ENST00000262768 ARHGAP6O43182 974 aa16.88■□□□□ 0.29
TIMP2-201ENST00000262768 TBCAO75347 108 aaKnown RBP16.88■□□□□ 0.29
TIMP2-201ENST00000262768 IL1R1P14778 569 aa16.88■□□□□ 0.29
TIMP2-201ENST00000262768 USP8P40818 1118 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms