RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 MFSD14BQ5SR56 506 aa25.35■■□□□ 1.65
MCF2L-201ENST00000261963 PRCPP42785 496 aa25.34■■□□□ 1.65
MCF2L-201ENST00000261963 CHMP4BP1P59074 171 aa25.34■■□□□ 1.65
MCF2L-201ENST00000261963 CCDC12Q8WUD4 166 aaPredicted RBP25.34■■□□□ 1.65
MCF2L-201ENST00000261963 RBM17Q96I25 401 aaKnown RBP25.34■■□□□ 1.65
MCF2L-201ENST00000261963 ITIH6Q6UXX5 1313 aa25.34■■□□□ 1.65
MCF2L-201ENST00000261963 GAKO14976 1311 aa25.34■■□□□ 1.65
MCF2L-201ENST00000261963 BEND6Q5SZJ8 279 aaPredicted RBP25.34■■□□□ 1.65
MCF2L-201ENST00000261963 USP17L2Q6R6M4 530 aa25.34■■□□□ 1.65
MCF2L-201ENST00000261963 MSL3Q8N5Y2 521 aaKnown RBP25.34■■□□□ 1.65
MCF2L-201ENST00000261963 TBC1D16Q8TBP0 767 aa25.34■■□□□ 1.65
MCF2L-201ENST00000261963 MAPK8IP1Q9UQF2 711 aa25.34■■□□□ 1.65
MCF2L-201ENST00000261963 POTEB2H3BUK9 544 aa25.33■■□□□ 1.65
MCF2L-201ENST00000261963 CASP14P31944 242 aa25.33■■□□□ 1.65
MCF2L-201ENST00000261963 FXR1P51114 621 aaKnown RBP eCLIP25.33■■□□□ 1.65
MCF2L-201ENST00000261963 SRGAP1Q7Z6B7 1085 aa25.33■■□□□ 1.65
MCF2L-201ENST00000261963 CEP95Q96GE4 821 aa25.33■■□□□ 1.65
MCF2L-201ENST00000261963 NAA15Q9BXJ9 866 aaKnown RBP25.33■■□□□ 1.65
MCF2L-201ENST00000261963 CCSER1Q9C0I3 900 aa25.33■■□□□ 1.65
MCF2L-201ENST00000261963 SPATA31A6Q5VVP1 1343 aa25.33■■□□□ 1.64
MCF2L-201ENST00000261963 PARP1P09874 1014 aaKnown RBP25.33■■□□□ 1.64
MCF2L-201ENST00000261963 PLCG2P16885 1265 aa25.33■■□□□ 1.64
MCF2L-201ENST00000261963 COPB1P53618 953 aaKnown RBP25.33■■□□□ 1.64
MCF2L-201ENST00000261963 LAD1O00515 517 aa25.32■■□□□ 1.64
MCF2L-201ENST00000261963 KLRC4O43908 158 aa25.32■■□□□ 1.64
MCF2L-201ENST00000261963 ERLIN1O75477 346 aa25.32■■□□□ 1.64
MCF2L-201ENST00000261963 PRPHP41219 470 aa25.32■■□□□ 1.64
MCF2L-201ENST00000261963 NAPAP54920 295 aa25.32■■□□□ 1.64
MCF2L-201ENST00000261963 TCP11X2Q5H9J9 407 aa25.32■■□□□ 1.64
MCF2L-201ENST00000261963 ZSWIM4Q9H7M6 989 aa25.32■■□□□ 1.64
MCF2L-201ENST00000261963 ADGRG1Q9Y653 693 aa25.32■■□□□ 1.64
MCF2L-201ENST00000261963 N4BP3O15049 544 aa25.32■■□□□ 1.64
MCF2L-201ENST00000261963 BBOX1O75936 387 aa25.32■■□□□ 1.64
MCF2L-201ENST00000261963 FECHP22830 423 aa25.32■■□□□ 1.64
MCF2L-201ENST00000261963 NOVP48745 357 aa25.32■■□□□ 1.64
MCF2L-201ENST00000261963 ADSSL1Q8N142 457 aa25.32■■□□□ 1.64
MCF2L-201ENST00000261963 KBTBD4Q9NVX7 518 aa25.32■■□□□ 1.64
MCF2L-201ENST00000261963 TAB2Q9NYJ8 693 aa25.32■■□□□ 1.64
MCF2L-201ENST00000261963 KCNJ18B7U540 433 aa25.31■■□□□ 1.64
MCF2L-201ENST00000261963 CCDC175P0C221 793 aa25.31■■□□□ 1.64
MCF2L-201ENST00000261963 UBA7P41226 1012 aa25.31■■□□□ 1.64
MCF2L-201ENST00000261963 SPAG1Q07617 926 aa25.31■■□□□ 1.64
MCF2L-201ENST00000261963 KCNJ12Q14500 433 aa25.31■■□□□ 1.64
MCF2L-201ENST00000261963 PLIN2Q99541 437 aa25.31■■□□□ 1.64
MCF2L-201ENST00000261963 VPS16Q9H269 839 aa25.31■■□□□ 1.64
MCF2L-201ENST00000261963 ANKZF1Q9H8Y5 726 aa25.31■■□□□ 1.64
MCF2L-201ENST00000261963 JRKLQ9Y4A0 524 aa25.31■■□□□ 1.64
MCF2L-201ENST00000261963 UBR3Q6ZT12 1888 aa25.31■■□□□ 1.64
MCF2L-201ENST00000261963 HOXA10P31260 410 aaPredicted RBP25.31■■□□□ 1.64
MCF2L-201ENST00000261963 PACS2Q86VP3 889 aa25.31■■□□□ 1.64
MCF2L-201ENST00000261963 IRF2BP1Q8IU81 584 aa25.31■■□□□ 1.64
MCF2L-201ENST00000261963 EP400Q96L91 3159 aa25.3■■□□□ 1.64
MCF2L-201ENST00000261963 EIF3CLB5ME19 914 aaKnown RBP25.3■■□□□ 1.64
MCF2L-201ENST00000261963 DDR1Q08345 913 aa25.3■■□□□ 1.64
MCF2L-201ENST00000261963 KCNB1Q14721 858 aa25.3■■□□□ 1.64
MCF2L-201ENST00000261963 CNGA4Q8IV77 575 aa25.3■■□□□ 1.64
MCF2L-201ENST00000261963 EIF3CQ99613 913 aaKnown RBP25.3■■□□□ 1.64
MCF2L-201ENST00000261963 RAB21Q9UL25 225 aa25.3■■□□□ 1.64
MCF2L-201ENST00000261963 FAN1Q9Y2M0 1017 aa25.3■■□□□ 1.64
MCF2L-201ENST00000261963 A0A0U1RQJ8 604 aa25.29■■□□□ 1.64
MCF2L-201ENST00000261963 SMCO2A6NFE2 343 aa25.29■■□□□ 1.64
MCF2L-201ENST00000261963 RNF225M0QZC1 329 aaPredicted RBP25.29■■□□□ 1.64
MCF2L-201ENST00000261963 ONECUT3O60422 494 aaPredicted RBP25.29■■□□□ 1.64
MCF2L-201ENST00000261963 FOXR1Q6PIV2 292 aa25.29■■□□□ 1.64
MCF2L-201ENST00000261963 KRT25Q7Z3Z0 450 aa25.29■■□□□ 1.64
MCF2L-201ENST00000261963 CEP112Q8N8E3 955 aa25.29■■□□□ 1.64
MCF2L-201ENST00000261963 RASSF8Q8NHQ8 419 aa25.29■■□□□ 1.64
MCF2L-201ENST00000261963 ATRIPQ8WXE1 791 aa25.29■■□□□ 1.64
MCF2L-201ENST00000261963 TRIM49BA6NDI0 452 aa25.29■■□□□ 1.64
MCF2L-201ENST00000261963 PMS1P54277 932 aaKnown RBP25.29■■□□□ 1.64
MCF2L-201ENST00000261963 TBC1D22AQ8WUA7 517 aa25.29■■□□□ 1.64
MCF2L-201ENST00000261963 CCDC51Q96ER9 411 aa25.29■■□□□ 1.64
MCF2L-201ENST00000261963 RRP36Q96EU6 259 aaKnown RBP25.29■■□□□ 1.64
MCF2L-201ENST00000261963 IRX2Q9BZI1 471 aaPredicted RBP25.29■■□□□ 1.64
MCF2L-201ENST00000261963 GUCY2CP25092 1073 aa25.28■■□□□ 1.64
MCF2L-201ENST00000261963 NONOQ15233 471 aaKnown RBP eCLIP25.28■■□□□ 1.64
MCF2L-201ENST00000261963 SEPT12Q8IYM1 358 aa25.28■■□□□ 1.64
MCF2L-201ENST00000261963 PPM1EQ8WY54 764 aa25.28■■□□□ 1.64
MCF2L-201ENST00000261963 PIGSQ96S52 555 aa25.28■■□□□ 1.64
MCF2L-201ENST00000261963 L1RE1Q9UN81 338 aa25.28■■□□□ 1.64
MCF2L-201ENST00000261963 DAGLAQ9Y4D2 1042 aa25.28■■□□□ 1.64
MCF2L-201ENST00000261963 USP17L5A8MUK1 530 aa25.28■■□□□ 1.64
MCF2L-201ENST00000261963 SMARCA1P28370 1054 aa25.28■■□□□ 1.64
MCF2L-201ENST00000261963 LETM2Q2VYF4 491 aa25.28■■□□□ 1.64
MCF2L-201ENST00000261963 SLF2Q8IX21 1173 aa25.28■■□□□ 1.64
MCF2L-201ENST00000261963 MSANTD4Q8NCY6 345 aa25.28■■□□□ 1.64
MCF2L-201ENST00000261963 H7C1D1 291 aa25.27■■□□□ 1.64
MCF2L-201ENST00000261963 N4BP1O75113 896 aaKnown RBP25.27■■□□□ 1.64
MCF2L-201ENST00000261963 MYL1P05976 194 aa25.27■■□□□ 1.64
MCF2L-201ENST00000261963 OR52Z1P0C646 297 aa25.27■■□□□ 1.64
MCF2L-201ENST00000261963 TUBB4BP68371 445 aa25.27■■□□□ 1.64
MCF2L-201ENST00000261963 VAT1LQ9HCJ6 419 aa25.27■■□□□ 1.64
MCF2L-201ENST00000261963 C6orf50Q9HD87 102 aa25.27■■□□□ 1.64
MCF2L-201ENST00000261963 PUF60Q9UHX1 559 aaKnown RBP25.27■■□□□ 1.64
MCF2L-201ENST00000261963 CCNT1O60563 726 aaKnown RBP25.27■■□□□ 1.64
MCF2L-201ENST00000261963 RHOBTB3O94955 611 aa25.27■■□□□ 1.64
MCF2L-201ENST00000261963 TXNRD1Q16881 649 aa25.27■■□□□ 1.64
MCF2L-201ENST00000261963 C6orf229H3BNL8 230 aa25.26■■□□□ 1.63
MCF2L-201ENST00000261963 PLCG1P19174 1290 aa25.26■■□□□ 1.63
MCF2L-201ENST00000261963 GNA11P29992 359 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms