RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 LTBP1Q14766 1721 aa12.11□□□□□ -0.47
CHRNA1-201ENST00000261007 SMIM22K7EJ46 135 aa12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 POLR2DO15514 142 aaKnown RBP12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 ACTN4O43707 911 aaKnown RBP12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 ARHGAP25P42331 645 aa12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 BTDP43251 543 aa12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 NLRP5P59047 1200 aa12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 CYP26C1Q6V0L0 522 aa12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 PNMA1Q8ND90 353 aa12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 TBC1D16Q8TBP0 767 aa12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 OXER1Q8TDS5 423 aa12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 TNFRSF25Q93038 417 aa12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 HPCAL4Q9UM19 191 aa12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 DDX60LQ5H9U9 1706 aaKnown RBP12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 PPEF1O14829 653 aaPredicted RBP12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 SMARCA1P28370 1054 aa12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 CASP14P31944 242 aa12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 TTC38Q5R3I4 469 aa12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 C16orf86Q6ZW13 317 aa12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 CCDC91Q7Z6B0 441 aa12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 TEX11Q8IYF3 940 aa12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 NOA1Q8NC60 698 aaKnown RBP12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 COG1Q8WTW3 980 aa12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 TGFBRAP1Q8WUH2 860 aa12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 NRXN2Q9P2S2 1712 aa12.1□□□□□ -0.47
CHRNA1-201ENST00000261007 BRWD3Q6RI45 1802 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 A0A0U1RQJ8 604 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 LRRC10BA6NIK2 292 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 PSMD14O00487 310 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 PHACTR2O75167 634 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 GYPCP04921 128 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 CHRM1P11229 460 aaPredicted RBP12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 DDR1Q08345 913 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 CUL4BQ13620 913 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 TXNRD1Q16881 649 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 MFSD14BQ5SR56 506 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 TRAPPC11Q7Z392 1133 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 TEX2Q8IWB9 1127 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 ATRIPQ8WXE1 791 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 TMX4Q9H1E5 349 aaPredicted RBP12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 JAG2Q9Y219 1238 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 ATP6V0A2Q9Y487 856 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 SYNRGQ9UMZ2 1314 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 ZC3H4Q9UPT8 1303 aaKnown RBP12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 PLSCR1O15162 318 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 NMT2O60551 498 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 TRIM37O94972 964 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 NPR1P16066 1061 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 ALDH1B1P30837 517 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 USP8P40818 1118 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 MMP14P50281 582 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 ATP2C1P98194 919 aaPredicted RBP12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 CKAP4Q07065 602 aaKnown RBP12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 STIM1Q13586 685 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 DIXDC1Q155Q3 683 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 ARL6IP4Q66PJ3 421 aaKnown RBP12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 ZNF662Q6ZS27 426 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 DAGLBQ8NCG7 672 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 NEDD1Q8NHV4 660 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 CPLX3Q8WVH0 158 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 DRC1Q96MC2 740 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 ABHD10Q9NUJ1 306 aa12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 LIMA1Q9UHB6 759 aaKnown RBP12.09□□□□□ -0.47
CHRNA1-201ENST00000261007 CDK5RAP2Q96SN8 1893 aa12.08□□□□□ -0.48
CHRNA1-201ENST00000261007 A6NNZ2 444 aa12.08□□□□□ -0.48
CHRNA1-201ENST00000261007 C6orf229H3BNL8 230 aa12.08□□□□□ -0.48
CHRNA1-201ENST00000261007 RASA1P20936 1047 aa12.08□□□□□ -0.48
CHRNA1-201ENST00000261007 FXR1P51114 621 aaKnown RBP eCLIP12.08□□□□□ -0.48
CHRNA1-201ENST00000261007 GSCP56915 257 aaPredicted RBP12.08□□□□□ -0.48
CHRNA1-201ENST00000261007 SPAG1Q07617 926 aa12.08□□□□□ -0.48
CHRNA1-201ENST00000261007 NPY5RQ15761 445 aa12.08□□□□□ -0.48
CHRNA1-201ENST00000261007 ZNF827Q17R98 1081 aa12.08□□□□□ -0.48
CHRNA1-201ENST00000261007 TUBB8Q3ZCM7 444 aa12.08□□□□□ -0.48
CHRNA1-201ENST00000261007 GBP6Q6ZN66 633 aa12.08□□□□□ -0.48
CHRNA1-201ENST00000261007 SH3RF1Q7Z6J0 888 aa12.08□□□□□ -0.48
CHRNA1-201ENST00000261007 RPAINQ86UA6 219 aa12.08□□□□□ -0.48
CHRNA1-201ENST00000261007 ACRBPQ8NEB7 543 aa12.08□□□□□ -0.48
CHRNA1-201ENST00000261007 GSDMAQ96QA5 445 aa12.08□□□□□ -0.48
CHRNA1-201ENST00000261007 CSRNP2Q9H175 543 aa12.08□□□□□ -0.48
CHRNA1-201ENST00000261007 IL17RBQ9NRM6 502 aa12.08□□□□□ -0.48
CHRNA1-201ENST00000261007 FOCADQ5VW36 1801 aa12.08□□□□□ -0.48
CHRNA1-201ENST00000261007 ERLIN2O94905 339 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 PDE6BP35913 854 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 ERVK-24P63145 666 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 QSER1Q2KHR3 1735 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 SPECC1Q5M775 1068 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 PAPD7Q5XG87 772 aaKnown RBP12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 C10orf71Q711Q0 1435 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 MAPKAPK5Q8IW41 473 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 BLIDQ8IZY5 108 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 MICALL1Q8N3F8 863 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 FAM76AQ8TAV0 307 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 RUBCNQ92622 972 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 SHISA4Q96DD7 197 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 SPZ1Q9BXG8 430 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 HAUS4Q9H6D7 363 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 POLLQ9UGP5 575 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 PCDHA4Q9UN74 947 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 FLT1P17948 1338 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 MYO3BQ8WXR4 1341 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms