RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 RNF26Q9BY78 433 aaPredicted RBP23.89■■□□□ 1.42
RTCA-201ENST00000260563 RBM27Q9P2N5 1060 aaKnown RBP23.89■■□□□ 1.42
RTCA-201ENST00000260563 PLXNA1Q9UIW2 1896 aa23.89■■□□□ 1.41
RTCA-201ENST00000260563 ECM2O94769 699 aaPredicted RBP23.89■■□□□ 1.41
RTCA-201ENST00000260563 ALAS1P13196 640 aa23.89■■□□□ 1.41
RTCA-201ENST00000260563 ERCC3P19447 782 aa23.89■■□□□ 1.41
RTCA-201ENST00000260563 MAPK4P31152 587 aa23.89■■□□□ 1.41
RTCA-201ENST00000260563 AKAP17AQ02040 695 aaKnown RBP23.89■■□□□ 1.41
RTCA-201ENST00000260563 TKFCQ3LXA3 575 aa23.89■■□□□ 1.41
RTCA-201ENST00000260563 TRIM22Q8IYM9 498 aa23.89■■□□□ 1.41
RTCA-201ENST00000260563 ERO1AQ96HE7 468 aa23.89■■□□□ 1.41
RTCA-201ENST00000260563 SLC26A6Q9BXS9 759 aa23.89■■□□□ 1.41
RTCA-201ENST00000260563 EFCC1Q9HA90 598 aa23.89■■□□□ 1.41
RTCA-201ENST00000260563 HOMER2Q9NSB8 354 aa23.89■■□□□ 1.41
RTCA-201ENST00000260563 hCG_1642624A0A1W2PR95 340 aa23.88■■□□□ 1.41
RTCA-201ENST00000260563 PPFIA3O75145 1194 aa23.88■■□□□ 1.41
RTCA-201ENST00000260563 TAL1P17542 331 aaPredicted RBP23.88■■□□□ 1.41
RTCA-201ENST00000260563 FCGRTP55899 365 aa23.88■■□□□ 1.41
RTCA-201ENST00000260563 TRAF1Q13077 416 aa23.88■■□□□ 1.41
RTCA-201ENST00000260563 MROH8Q9H579 483 aa23.88■■□□□ 1.41
RTCA-201ENST00000260563 RIPK3Q9Y572 518 aa23.88■■□□□ 1.41
RTCA-201ENST00000260563 ABCB11O95342 1321 aa23.87■■□□□ 1.41
RTCA-201ENST00000260563 PRPF3O43395 683 aaKnown RBP23.87■■□□□ 1.41
RTCA-201ENST00000260563 PPP1R11O60927 126 aaPredicted RBP23.87■■□□□ 1.41
RTCA-201ENST00000260563 FMNL1O95466 1100 aaPredicted RBP23.87■■□□□ 1.41
RTCA-201ENST00000260563 SSRP1Q08945 709 aaKnown RBP23.87■■□□□ 1.41
RTCA-201ENST00000260563 FAM184AQ8NB25 1140 aa23.87■■□□□ 1.41
RTCA-201ENST00000260563 CHST13Q8NET6 341 aa23.87■■□□□ 1.41
RTCA-201ENST00000260563 CD99L2Q8TCZ2 262 aa23.87■■□□□ 1.41
RTCA-201ENST00000260563 TRERF1Q96PN7 1200 aa23.87■■□□□ 1.41
RTCA-201ENST00000260563 RNF146Q9NTX7 359 aa23.87■■□□□ 1.41
RTCA-201ENST00000260563 V9GY48 417 aaPredicted RBP23.87■■□□□ 1.41
RTCA-201ENST00000260563 STK36Q9NRP7 1315 aa23.86■■□□□ 1.41
RTCA-201ENST00000260563 FDPSP14324 419 aaKnown RBP23.86■■□□□ 1.41
RTCA-201ENST00000260563 PSMC4P43686 418 aa23.86■■□□□ 1.41
RTCA-201ENST00000260563 GPR142Q7Z601 462 aa23.86■■□□□ 1.41
RTCA-201ENST00000260563 ACAD9Q9H845 621 aa23.86■■□□□ 1.41
RTCA-201ENST00000260563 ORC3Q9UBD5 711 aaPredicted RBP23.86■■□□□ 1.41
RTCA-201ENST00000260563 FBXO40Q9UH90 709 aa23.86■■□□□ 1.41
RTCA-201ENST00000260563 CIZ1Q9ULV3 898 aaPredicted RBP23.86■■□□□ 1.41
RTCA-201ENST00000260563 KIF3AQ9Y496 699 aa23.86■■□□□ 1.41
RTCA-201ENST00000260563 TNPO2O14787 897 aaKnown RBP23.85■■□□□ 1.41
RTCA-201ENST00000260563 ARHGAP39Q9C0H5 1083 aa23.85■■□□□ 1.41
RTCA-201ENST00000260563 PCDHA1Q9Y5I3 950 aa23.85■■□□□ 1.41
RTCA-201ENST00000260563 IVNS1ABPQ9Y6Y0 642 aa23.85■■□□□ 1.41
RTCA-201ENST00000260563 LCTP09848 1927 aa23.85■■□□□ 1.41
RTCA-201ENST00000260563 hCG_1984214I3L0E3 225 aa23.84■■□□□ 1.41
RTCA-201ENST00000260563 CTGFP29279 349 aa23.84■■□□□ 1.41
RTCA-201ENST00000260563 LBX1P52954 281 aa23.84■■□□□ 1.41
RTCA-201ENST00000260563 PFKFB3Q16875 520 aaPredicted RBP23.84■■□□□ 1.41
RTCA-201ENST00000260563 HEATR3Q7Z4Q2 680 aa23.84■■□□□ 1.41
RTCA-201ENST00000260563 PLEKHH3Q7Z736 793 aa23.84■■□□□ 1.41
RTCA-201ENST00000260563 ZNF713Q8N859 430 aaPredicted RBP23.84■■□□□ 1.41
RTCA-201ENST00000260563 CHMP5Q9NZZ3 219 aa23.84■■□□□ 1.41
RTCA-201ENST00000260563 DEXIO95424 95 aa23.84■■□□□ 1.41
RTCA-201ENST00000260563 SCG2P13521 617 aa23.84■■□□□ 1.41
RTCA-201ENST00000260563 ARHGEF6Q15052 776 aa23.84■■□□□ 1.41
RTCA-201ENST00000260563 GPKOWQ92917 476 aaPredicted RBP eCLIP23.84■■□□□ 1.416e-10■□□□□ 11.1
RTCA-201ENST00000260563 COA7Q96BR5 231 aa23.84■■□□□ 1.41
RTCA-201ENST00000260563 TRIM47Q96LD4 638 aa23.84■■□□□ 1.41
RTCA-201ENST00000260563 MRPL11Q9Y3B7 192 aaKnown RBP23.84■■□□□ 1.41
RTCA-201ENST00000260563 PDCP20941 246 aa23.83■■□□□ 1.41
RTCA-201ENST00000260563 MUM1L1Q5H9M0 696 aa23.83■■□□□ 1.41
RTCA-201ENST00000260563 LARP1BQ659C4 914 aaKnown RBP23.83■■□□□ 1.41
RTCA-201ENST00000260563 WWC2Q6AWC2 1192 aa23.83■■□□□ 1.41
RTCA-201ENST00000260563 MMP19Q99542 508 aa23.83■■□□□ 1.41
RTCA-201ENST00000260563 FCER1AP12319 257 aa23.82■■□□□ 1.4
RTCA-201ENST00000260563 SYT1P21579 422 aa23.82■■□□□ 1.4
RTCA-201ENST00000260563 PKN1Q16512 942 aa23.82■■□□□ 1.4
RTCA-201ENST00000260563 NFIBO00712 420 aa23.81■■□□□ 1.4
RTCA-201ENST00000260563 STRNO43815 780 aa23.81■■□□□ 1.4
RTCA-201ENST00000260563 GNRH1P01148 92 aa23.81■■□□□ 1.4
RTCA-201ENST00000260563 NUCB2P80303 420 aa23.81■■□□□ 1.4
RTCA-201ENST00000260563 KCTD2Q14681 263 aa23.81■■□□□ 1.4
RTCA-201ENST00000260563 PPP1R18Q6NYC8 613 aa23.81■■□□□ 1.4
RTCA-201ENST00000260563 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.81■■□□□ 1.4
RTCA-201ENST00000260563 ANKRD35Q8N283 1001 aa23.81■■□□□ 1.4
RTCA-201ENST00000260563 WASF1Q92558 559 aa23.81■■□□□ 1.4
RTCA-201ENST00000260563 PDIA4P13667 645 aaKnown RBP23.8■■□□□ 1.4
RTCA-201ENST00000260563 PTPREP23469 700 aa23.8■■□□□ 1.4
RTCA-201ENST00000260563 NAPAP54920 295 aa23.8■■□□□ 1.4
RTCA-201ENST00000260563 CAP1Q01518 475 aa23.8■■□□□ 1.4
RTCA-201ENST00000260563 GRB14Q14449 540 aa23.8■■□□□ 1.4
RTCA-201ENST00000260563 SOCS4Q8WXH5 440 aa23.8■■□□□ 1.4
RTCA-201ENST00000260563 CLEC4DQ8WXI8 215 aa23.8■■□□□ 1.4
RTCA-201ENST00000260563 BARHL2Q9NY43 387 aa23.8■■□□□ 1.4
RTCA-201ENST00000260563 PFASO15067 1338 aa23.8■■□□□ 1.4
RTCA-201ENST00000260563 SLC15A5A6NIM6 579 aa23.79■■□□□ 1.4
RTCA-201ENST00000260563 STX6O43752 255 aa23.79■■□□□ 1.4
RTCA-201ENST00000260563 HOXD10P28358 340 aa23.79■■□□□ 1.4
RTCA-201ENST00000260563 PKP1Q13835 747 aa23.79■■□□□ 1.4
RTCA-201ENST00000260563 NSMFQ6X4W1 530 aa23.79■■□□□ 1.4
RTCA-201ENST00000260563 MCF2L2Q86YR7 1114 aa23.79■■□□□ 1.4
RTCA-201ENST00000260563 ABRAQ8N0Z2 381 aa23.79■■□□□ 1.4
RTCA-201ENST00000260563 NUDT12Q9BQG2 462 aa23.79■■□□□ 1.4
RTCA-201ENST00000260563 ALG1Q9BT22 464 aa23.79■■□□□ 1.4
RTCA-201ENST00000260563 A1CFQ9NQ94 594 aaKnown RBP23.79■■□□□ 1.4
RTCA-201ENST00000260563 STXBP3O00186 592 aa23.79■■□□□ 1.4
RTCA-201ENST00000260563 CCDC12Q8WUD4 166 aaPredicted RBP23.79■■□□□ 1.4
RTCA-201ENST00000260563 ADORA2AP29274 412 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms