RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 BMP15O95972 392 aa16.48■□□□□ 0.23
TRAFD1-201ENST00000257604 CACNB1Q02641 598 aaPredicted RBP16.48■□□□□ 0.23
TRAFD1-201ENST00000257604 NEK8Q86SG6 692 aa16.48■□□□□ 0.23
TRAFD1-201ENST00000257604 CERS3Q8IU89 383 aa16.48■□□□□ 0.23
TRAFD1-201ENST00000257604 PPP1R13BQ96KQ4 1090 aa16.48■□□□□ 0.23
TRAFD1-201ENST00000257604 PLCG1P19174 1290 aa16.47■□□□□ 0.23
TRAFD1-201ENST00000257604 ADCY7P51828 1080 aa16.47■□□□□ 0.23
TRAFD1-201ENST00000257604 UBXN2AP68543 259 aa16.47■□□□□ 0.23
TRAFD1-201ENST00000257604 CABP7Q86V35 215 aa16.47■□□□□ 0.23
TRAFD1-201ENST00000257604 FCHSD1Q86WN1 690 aa16.47■□□□□ 0.23
TRAFD1-201ENST00000257604 TBC1D7Q9P0N9 293 aa16.47■□□□□ 0.23
TRAFD1-201ENST00000257604 IKBKBO14920 756 aa16.47■□□□□ 0.23
TRAFD1-201ENST00000257604 N4BP3O15049 544 aa16.47■□□□□ 0.23
TRAFD1-201ENST00000257604 CBFA2T2O43439 604 aa16.47■□□□□ 0.23
TRAFD1-201ENST00000257604 ICA1Q05084 483 aa16.47■□□□□ 0.23
TRAFD1-201ENST00000257604 CCDC12Q8WUD4 166 aaPredicted RBP16.47■□□□□ 0.23
TRAFD1-201ENST00000257604 PCMTD1Q96MG8 357 aaPredicted RBP16.47■□□□□ 0.23
TRAFD1-201ENST00000257604 DNAJC18Q9H819 358 aa16.47■□□□□ 0.23
TRAFD1-201ENST00000257604 JMJD4Q9H9V9 463 aa16.47■□□□□ 0.23
TRAFD1-201ENST00000257604 A0A1B0GUL6 1792 aa16.47■□□□□ 0.23
TRAFD1-201ENST00000257604 SNED1Q8TER0 1413 aa16.47■□□□□ 0.23
TRAFD1-201ENST00000257604 NID2Q14112 1375 aa16.47■□□□□ 0.23
TRAFD1-201ENST00000257604 CCDC88AQ3V6T2 1871 aa16.47■□□□□ 0.23
TRAFD1-201ENST00000257604 SLC37A4O43826 429 aa16.46■□□□□ 0.23
TRAFD1-201ENST00000257604 SLFN13Q68D06 897 aa16.46■□□□□ 0.23
TRAFD1-201ENST00000257604 MYH15Q9Y2K3 1946 aa16.46■□□□□ 0.23
TRAFD1-201ENST00000257604 RPN1P04843 607 aaKnown RBP16.46■□□□□ 0.23
TRAFD1-201ENST00000257604 OR52Z1P0C646 297 aa16.46■□□□□ 0.23
TRAFD1-201ENST00000257604 HOXA13P31271 388 aaPredicted RBP16.46■□□□□ 0.23
TRAFD1-201ENST00000257604 FLAD1Q8NFF5 587 aa16.46■□□□□ 0.23
TRAFD1-201ENST00000257604 NEK11Q8NG66 645 aa16.46■□□□□ 0.23
TRAFD1-201ENST00000257604 NELFBQ8WX92 580 aa16.46■□□□□ 0.23
TRAFD1-201ENST00000257604 FAM163AQ96GL9 167 aaPredicted RBP16.46■□□□□ 0.23
TRAFD1-201ENST00000257604 INTS13Q9NVM9 706 aa16.46■□□□□ 0.23
TRAFD1-201ENST00000257604 PCDHA1Q9Y5I3 950 aa16.46■□□□□ 0.23
TRAFD1-201ENST00000257604 SBF2Q86WG5 1849 aa16.46■□□□□ 0.23
TRAFD1-201ENST00000257604 GSDMDP57764 484 aa16.46■□□□□ 0.22
TRAFD1-201ENST00000257604 CALCRLQ16602 461 aa16.46■□□□□ 0.22
TRAFD1-201ENST00000257604 DISC1Q9NRI5 854 aa16.46■□□□□ 0.22
TRAFD1-201ENST00000257604 FAM198AQ9UFP1 575 aa16.46■□□□□ 0.22
TRAFD1-201ENST00000257604 KLRG2A4D1S0 409 aaPredicted RBP16.45■□□□□ 0.22
TRAFD1-201ENST00000257604 DACT2Q5SW24 774 aa16.45■□□□□ 0.22
TRAFD1-201ENST00000257604 TIAM2Q8IVF5 1701 aa16.45■□□□□ 0.22
TRAFD1-201ENST00000257604 PSTPIP2Q9H939 334 aa16.45■□□□□ 0.22
TRAFD1-201ENST00000257604 CASZ1Q86V15 1759 aa16.45■□□□□ 0.22
TRAFD1-201ENST00000257604 PRCPP42785 496 aa16.45■□□□□ 0.22
TRAFD1-201ENST00000257604 CLCN6P51797 869 aa16.45■□□□□ 0.22
TRAFD1-201ENST00000257604 SH3BP5LQ7L8J4 393 aa16.45■□□□□ 0.22
TRAFD1-201ENST00000257604 TMC4Q7Z404 712 aa16.45■□□□□ 0.22
TRAFD1-201ENST00000257604 CNKSR1Q969H4 720 aa16.45■□□□□ 0.22
TRAFD1-201ENST00000257604 SLC39A2Q9NP94 309 aa16.45■□□□□ 0.22
TRAFD1-201ENST00000257604 LRWD1Q9UFC0 647 aa16.45■□□□□ 0.22
TRAFD1-201ENST00000257604 ECE1P42892 770 aa16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 MTF1Q14872 753 aa16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 CCDC174Q6PII3 467 aa16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 OGFOD1Q8N543 542 aa16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 TRIM47Q96LD4 638 aa16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 BRWD3Q6RI45 1802 aa16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 SHTN1A0MZ66 631 aa16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 YDJCA8MPS7 323 aa16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 PPP1R11O60927 126 aaPredicted RBP16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 FCER1AP12319 257 aa16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 PDE4DQ08499 809 aa16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 ABCB5Q2M3G0 1257 aa16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 KRT25Q7Z3Z0 450 aa16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 BPIFA3Q9BQP9 254 aa16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 SPZ1Q9BXG8 430 aa16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 ZMYND12Q9H0C1 365 aa16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 PI4KBQ9UBF8 816 aa16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 FAM237AA0A1B0GTK4 181 aa16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 JAG1P78504 1218 aa16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 ZNF543Q08ER8 600 aa16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 LRRC41Q15345 812 aa16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 SKIDA1Q1XH10 827 aa16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 PPFIBP1Q86W92 1011 aa16.44■□□□□ 0.22
TRAFD1-201ENST00000257604 DPEP1P16444 411 aa16.43■□□□□ 0.22
TRAFD1-201ENST00000257604 TRAPPC10P48553 1259 aa16.43■□□□□ 0.22
TRAFD1-201ENST00000257604 SARSP49591 514 aaKnown RBP16.43■□□□□ 0.22
TRAFD1-201ENST00000257604 MCM6Q14566 821 aa16.43■□□□□ 0.22
TRAFD1-201ENST00000257604 IGSF22Q8N9C0 903 aa16.43■□□□□ 0.22
TRAFD1-201ENST00000257604 LRRC15Q8TF66 581 aa16.43■□□□□ 0.22
TRAFD1-201ENST00000257604 NUDT12Q9BQG2 462 aa16.43■□□□□ 0.22
TRAFD1-201ENST00000257604 LZTS2Q9BRK4 669 aa16.43■□□□□ 0.22
TRAFD1-201ENST00000257604 CARD6Q9BX69 1037 aa16.43■□□□□ 0.22
TRAFD1-201ENST00000257604 TMOD2Q9NZR1 351 aa16.43■□□□□ 0.22
TRAFD1-201ENST00000257604 LONP1P36776 959 aaKnown RBP16.43■□□□□ 0.22
TRAFD1-201ENST00000257604 GABPAQ06546 454 aa16.43■□□□□ 0.22
TRAFD1-201ENST00000257604 QRICH1Q2TAL8 776 aa16.43■□□□□ 0.22
TRAFD1-201ENST00000257604 STRIP1Q5VSL9 837 aa16.43■□□□□ 0.22
TRAFD1-201ENST00000257604 VSTM4Q8IW00 320 aa16.43■□□□□ 0.22
TRAFD1-201ENST00000257604 C4orf32Q8N8J7 132 aa16.43■□□□□ 0.22
TRAFD1-201ENST00000257604 SNX29Q8TEQ0 813 aa16.43■□□□□ 0.22
TRAFD1-201ENST00000257604 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.43■□□□□ 0.22
TRAFD1-201ENST00000257604 LZTFL1Q9NQ48 299 aa16.43■□□□□ 0.22
TRAFD1-201ENST00000257604 UBR3Q6ZT12 1888 aa16.43■□□□□ 0.22
TRAFD1-201ENST00000257604 FAM170AA1A519 330 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 F5H6K3 240 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 PSMD14O00487 310 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 KLRC3Q07444 240 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 PAK1Q13153 545 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms