RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 TBC1D8BQ0IIM8 1120 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 BBS5Q8N3I7 341 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 ARRDC4Q8NCT1 418 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 NCAPGQ9BPX3 1015 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 NUDT12Q9BQG2 462 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 MTUS1Q9ULD2 1270 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 PPLO60437 1756 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 SLU7O95391 586 aaKnown RBP14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 LDHAP00338 332 aaKnown RBP14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 MAPK4P31152 587 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 COG2Q14746 738 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 KRT40Q6A162 431 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 GBA2Q9HCG7 927 aaPredicted RBP14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 PNPLA7Q6ZV29 1317 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 C3P01024 1663 aa14.88□□□□□ -0.03
PRPF38A-201ENST00000257181 TMCO5BA8MYB1 307 aa14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 DDX39AO00148 427 aaKnown RBP14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 TACC1O75410 805 aa14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 CCDC175P0C221 793 aa14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 ZNF280CQ8ND82 737 aa14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 NUB1Q9Y5A7 615 aa14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 STXBP3O00186 592 aa14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 CCDC84Q86UT8 332 aaPredicted RBP14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 SDR42E1Q8WUS8 393 aa14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 PSMD1Q99460 953 aa14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 CASQ1P31415 396 aa14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 FAM160A1Q05DH4 1040 aa14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 CCDC129Q6ZRS4 1044 aa14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 OTUD5Q96G74 571 aa14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 TIPINQ9BVW5 301 aa14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 FOXP1Q9H334 677 aaPredicted RBP14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 STK17AQ9UEE5 414 aa14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 FSD2A1L4K1 749 aa14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 HERC4Q5GLZ8 1057 aaPredicted RBP14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 TRIML1Q8N9V2 468 aa14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 TOPORSQ9NS56 1045 aaPredicted RBP14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 ZNF70Q9UC06 446 aaPredicted RBP14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 FRMPD2Q68DX3 1309 aaPredicted RBP14.87□□□□□ -0.03
PRPF38A-201ENST00000257181 M0R2C6 588 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 GDF11O95390 407 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 CHRNA5P30532 468 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 MCPH1Q8NEM0 835 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 PUS3Q9BZE2 481 aaKnown RBP14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 STMN4Q9H169 189 aaPredicted RBP14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 MMRN2Q9H8L6 949 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 TMEM191BP0C7N4 346 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 ANXA13P27216 316 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 PHKA2P46019 1235 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 GOLGA8FQ08AF8 430 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 GOLGA8DPQ0D2H9 430 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 RASGRF1Q13972 1273 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 GPRC5AQ8NFJ5 357 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 RLBP1P12271 317 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 COL23A1Q86Y22 540 aaPredicted RBP14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 THEM5Q8N1Q8 247 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 KIAA1586Q9HCI6 787 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 EHD2Q9NZN4 543 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 DBNLQ9UJU6 430 aaKnown RBP14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 ABCC6O95255 1503 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 PRPF3O43395 683 aaKnown RBP14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 FGAP02671 866 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 MYO1EQ12965 1108 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 CAMK4Q16566 473 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 SEPT14Q6ZU15 432 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 RNF180Q86T96 592 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 DPF2Q92785 391 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 PDS5AQ29RF7 1337 aaKnown RBP14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 NTSR2O95665 410 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 GH2P01242 217 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 SKIP12755 728 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 ERO1BQ86YB8 467 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 CNGA4Q8IV77 575 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 FAM227BQ96M60 508 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 MED10Q9BTT4 135 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 TDRD3Q9H7E2 651 aaKnown RBP14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 AAASQ9NRG9 546 aa14.86□□□□□ -0.03
PRPF38A-201ENST00000257181 GCNT3O95395 438 aa14.85□□□□□ -0.03
PRPF38A-201ENST00000257181 HARSP12081 509 aaKnown RBP14.85□□□□□ -0.03
PRPF38A-201ENST00000257181 KRT5P13647 590 aa14.85□□□□□ -0.03
PRPF38A-201ENST00000257181 DAAM2Q86T65 1068 aa14.85□□□□□ -0.03
PRPF38A-201ENST00000257181 ACCSQ96QU6 501 aa14.85□□□□□ -0.03
PRPF38A-201ENST00000257181 TRIM62Q9BVG3 475 aa14.85□□□□□ -0.03
PRPF38A-201ENST00000257181 A0A1B0GVL5 298 aa14.85□□□□□ -0.03
PRPF38A-201ENST00000257181 TNFAIP3P21580 790 aa14.85□□□□□ -0.03
PRPF38A-201ENST00000257181 STAT3P40763 770 aa14.85□□□□□ -0.03
PRPF38A-201ENST00000257181 TRMT2AQ8IZ69 625 aaKnown RBP14.85□□□□□ -0.03
PRPF38A-201ENST00000257181 TFIP11Q9UBB9 837 aaKnown RBP14.85□□□□□ -0.03
PRPF38A-201ENST00000257181 SEPT9Q9UHD8 586 aaPredicted RBP14.85□□□□□ -0.03
PRPF38A-201ENST00000257181 ZNF165P49910 485 aa14.85□□□□□ -0.03
PRPF38A-201ENST00000257181 SEMA3FQ13275 785 aa14.85□□□□□ -0.03
PRPF38A-201ENST00000257181 CEP135Q66GS9 1140 aa14.85□□□□□ -0.03
PRPF38A-201ENST00000257181 NYAP2Q9P242 653 aa14.85□□□□□ -0.03
PRPF38A-201ENST00000257181 CCL15-CCL14A0A0B4J2E2 113 aa14.85□□□□□ -0.03
PRPF38A-201ENST00000257181 ORC4O43929 436 aa14.85□□□□□ -0.03
PRPF38A-201ENST00000257181 CCL15Q16663 113 aa14.85□□□□□ -0.03
PRPF38A-201ENST00000257181 CFAP58Q5T655 872 aa14.85□□□□□ -0.03
PRPF38A-201ENST00000257181 CELF1Q92879 486 aaKnown RBP14.85□□□□□ -0.03
PRPF38A-201ENST00000257181 PGBD4Q96DM1 585 aa14.85□□□□□ -0.03
PRPF38A-201ENST00000257181 SHTN1A0MZ66 631 aa14.84□□□□□ -0.03
PRPF38A-201ENST00000257181 DAPK3O43293 454 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms