RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 MAMDC4Q6UXC1 1216 aa20.92■□□□□ 0.94
SNRPA1-201ENST00000254193 ZNF467Q7Z7K2 595 aaPredicted RBP20.92■□□□□ 0.94
SNRPA1-201ENST00000254193 TMTC2Q8N394 836 aa20.92■□□□□ 0.94
SNRPA1-201ENST00000254193 MSL3Q8N5Y2 521 aaKnown RBP20.92■□□□□ 0.94
SNRPA1-201ENST00000254193 DIS3LQ8TF46 1054 aaKnown RBP20.92■□□□□ 0.94
SNRPA1-201ENST00000254193 PURBQ96QR8 312 aaKnown RBP20.92■□□□□ 0.94
SNRPA1-201ENST00000254193 BRCA2P51587 3418 aa20.91■□□□□ 0.94
SNRPA1-201ENST00000254193 CCDC69A6NI79 296 aa20.91■□□□□ 0.94
SNRPA1-201ENST00000254193 SEPT4O43236 478 aa20.91■□□□□ 0.94
SNRPA1-201ENST00000254193 CAPN2P17655 700 aa20.91■□□□□ 0.94
SNRPA1-201ENST00000254193 LIFRP42702 1097 aa20.91■□□□□ 0.94
SNRPA1-201ENST00000254193 MNX1P50219 401 aaPredicted RBP20.91■□□□□ 0.94
SNRPA1-201ENST00000254193 EXOSC10Q01780 885 aaKnown RBP20.91■□□□□ 0.94
SNRPA1-201ENST00000254193 DHX32Q7L7V1 743 aaKnown RBP20.91■□□□□ 0.94
SNRPA1-201ENST00000254193 PAWRQ96IZ0 340 aaKnown RBP20.91■□□□□ 0.94
SNRPA1-201ENST00000254193 SYNGAP1Q96PV0 1343 aa20.91■□□□□ 0.94
SNRPA1-201ENST00000254193 NRBP1Q9UHY1 535 aa20.91■□□□□ 0.94
SNRPA1-201ENST00000254193 CNPY2Q9Y2B0 182 aa20.91■□□□□ 0.94
SNRPA1-201ENST00000254193 SNX14Q9Y5W7 946 aa20.91■□□□□ 0.94
SNRPA1-201ENST00000254193 DDX49Q9Y6V7 483 aaKnown RBP20.91■□□□□ 0.94
SNRPA1-201ENST00000254193 PTPDC1A2A3K4 754 aa20.9■□□□□ 0.94
SNRPA1-201ENST00000254193 DDAH1O94760 285 aa20.9■□□□□ 0.94
SNRPA1-201ENST00000254193 ZNF865P0CJ78 1059 aaPredicted RBP20.9■□□□□ 0.94
SNRPA1-201ENST00000254193 FBXO11Q86XK2 927 aa20.9■□□□□ 0.94
SNRPA1-201ENST00000254193 RAB11FIP4Q86YS3 637 aa20.9■□□□□ 0.94
SNRPA1-201ENST00000254193 ANKLE1Q8NAG6 615 aa20.9■□□□□ 0.94
SNRPA1-201ENST00000254193 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.9■□□□□ 0.94
SNRPA1-201ENST00000254193 ASTN1O14525 1302 aa20.89■□□□□ 0.93
SNRPA1-201ENST00000254193 CYTH3O43739 400 aa20.89■□□□□ 0.93
SNRPA1-201ENST00000254193 MSCO60682 206 aa20.89■□□□□ 0.93
SNRPA1-201ENST00000254193 CPA1P15085 419 aa20.89■□□□□ 0.93
SNRPA1-201ENST00000254193 RXRAP19793 462 aa20.89■□□□□ 0.93
SNRPA1-201ENST00000254193 CALML3P27482 149 aa20.89■□□□□ 0.93
SNRPA1-201ENST00000254193 SLC30A10Q6XR72 485 aa20.89■□□□□ 0.93
SNRPA1-201ENST00000254193 ARMCX2Q7L311 632 aa20.89■□□□□ 0.93
SNRPA1-201ENST00000254193 CCDC144CPQ8IYA2 1237 aa20.89■□□□□ 0.93
SNRPA1-201ENST00000254193 CTCFLQ8NI51 663 aaPredicted RBP20.89■□□□□ 0.93
SNRPA1-201ENST00000254193 MTMR8Q96EF0 704 aa20.89■□□□□ 0.93
SNRPA1-201ENST00000254193 JAKMIP1Q96N16 626 aaKnown RBP20.89■□□□□ 0.93
SNRPA1-201ENST00000254193 RIOX1Q9H6W3 641 aa20.89■□□□□ 0.93
SNRPA1-201ENST00000254193 ZHX1Q9UKY1 873 aaPredicted RBP20.89■□□□□ 0.93
SNRPA1-201ENST00000254193 SLC12A7Q9Y666 1083 aa20.89■□□□□ 0.93
SNRPA1-201ENST00000254193 RBBP6Q7Z6E9 1792 aaKnown RBP20.89■□□□□ 0.93
SNRPA1-201ENST00000254193 ABCB11O95342 1321 aa20.88■□□□□ 0.93
SNRPA1-201ENST00000254193 ZBTB5O15062 677 aa20.88■□□□□ 0.93
SNRPA1-201ENST00000254193 PPP1R11O60927 126 aaPredicted RBP20.88■□□□□ 0.93
SNRPA1-201ENST00000254193 RPS6P62753 249 aaKnown RBP20.88■□□□□ 0.93
SNRPA1-201ENST00000254193 RNF207Q6ZRF8 634 aa20.88■□□□□ 0.93
SNRPA1-201ENST00000254193 HOMER1Q86YM7 354 aa20.88■□□□□ 0.93
SNRPA1-201ENST00000254193 PIBF1Q8WXW3 757 aa20.88■□□□□ 0.93
SNRPA1-201ENST00000254193 PIGSQ96S52 555 aa20.88■□□□□ 0.93
SNRPA1-201ENST00000254193 MAP3K14Q99558 947 aa20.88■□□□□ 0.93
SNRPA1-201ENST00000254193 USP26Q9BXU7 913 aa20.88■□□□□ 0.93
SNRPA1-201ENST00000254193 HMGB1P09429 215 aaKnown RBP20.87■□□□□ 0.93
SNRPA1-201ENST00000254193 KIF5BP33176 963 aa20.87■□□□□ 0.93
SNRPA1-201ENST00000254193 ACVR2BQ13705 512 aa20.87■□□□□ 0.93
SNRPA1-201ENST00000254193 NECAB2Q7Z6G3 386 aa20.87■□□□□ 0.93
SNRPA1-201ENST00000254193 SGMS1Q86VZ5 419 aa20.87■□□□□ 0.93
SNRPA1-201ENST00000254193 TBC1D5Q92609 795 aa20.87■□□□□ 0.93
SNRPA1-201ENST00000254193 AMNQ9BXJ7 453 aa20.87■□□□□ 0.93
SNRPA1-201ENST00000254193 ASB14A6NK59 587 aa20.86■□□□□ 0.93
SNRPA1-201ENST00000254193 EPB41L2O43491 1005 aaKnown RBP20.86■□□□□ 0.93
SNRPA1-201ENST00000254193 PLEKHA8P1O95397 391 aa20.86■□□□□ 0.93
SNRPA1-201ENST00000254193 RGS22Q8NE09 1264 aa20.86■□□□□ 0.93
SNRPA1-201ENST00000254193 LENG1Q96BZ8 264 aaPredicted RBP20.86■□□□□ 0.93
SNRPA1-201ENST00000254193 ABHD16BQ9H3Z7 469 aa20.86■□□□□ 0.93
SNRPA1-201ENST00000254193 BRPF3Q9ULD4 1205 aa20.86■□□□□ 0.93
SNRPA1-201ENST00000254193 MRPL11Q9Y3B7 192 aaKnown RBP20.86■□□□□ 0.93
SNRPA1-201ENST00000254193 MYCNP04198 464 aaPredicted RBP20.85■□□□□ 0.93
SNRPA1-201ENST00000254193 CALM1P0DP23 149 aa20.85■□□□□ 0.93
SNRPA1-201ENST00000254193 CALM2P0DP24 149 aa20.85■□□□□ 0.93
SNRPA1-201ENST00000254193 CALM3P0DP25 149 aa20.85■□□□□ 0.93
SNRPA1-201ENST00000254193 AKR1A1P14550 325 aa20.85■□□□□ 0.93
SNRPA1-201ENST00000254193 BLOC1S2Q6QNY1 142 aa20.85■□□□□ 0.93
SNRPA1-201ENST00000254193 MICU3Q86XE3 530 aa20.85■□□□□ 0.93
SNRPA1-201ENST00000254193 CMTR1Q8N1G2 835 aaKnown RBP20.85■□□□□ 0.93
SNRPA1-201ENST00000254193 KATNBL1Q9H079 304 aa20.85■□□□□ 0.93
SNRPA1-201ENST00000254193 C11orf49Q9H6J7 331 aa20.85■□□□□ 0.93
SNRPA1-201ENST00000254193 FAM184BQ9ULE4 1060 aa20.85■□□□□ 0.93
SNRPA1-201ENST00000254193 PCDHA1Q9Y5I3 950 aa20.85■□□□□ 0.93
SNRPA1-201ENST00000254193 PNMA6FA0A0J9YX94 578 aa20.84■□□□□ 0.93
SNRPA1-201ENST00000254193 RARBP10826 455 aa20.84■□□□□ 0.93
SNRPA1-201ENST00000254193 GNAQP50148 359 aa20.84■□□□□ 0.93
SNRPA1-201ENST00000254193 FGD1P98174 961 aa20.84■□□□□ 0.93
SNRPA1-201ENST00000254193 GJC2Q5T442 439 aaPredicted RBP20.84■□□□□ 0.93
SNRPA1-201ENST00000254193 APOA5Q6Q788 366 aa20.84■□□□□ 0.93
SNRPA1-201ENST00000254193 SYNE3Q6ZMZ3 975 aa20.84■□□□□ 0.93
SNRPA1-201ENST00000254193 MCF2L2Q86YR7 1114 aa20.84■□□□□ 0.93
SNRPA1-201ENST00000254193 SRBD1Q8N5C6 995 aaKnown RBP20.84■□□□□ 0.93
SNRPA1-201ENST00000254193 FANCBQ8NB91 859 aa20.84■□□□□ 0.93
SNRPA1-201ENST00000254193 DPF3Q92784 378 aa20.84■□□□□ 0.93
SNRPA1-201ENST00000254193 LZTS2Q9BRK4 669 aa20.84■□□□□ 0.93
SNRPA1-201ENST00000254193 HTATIP2Q9BUP3 242 aa20.84■□□□□ 0.93
SNRPA1-201ENST00000254193 ADD3Q9UEY8 706 aaKnown RBP20.84■□□□□ 0.93
SNRPA1-201ENST00000254193 OPLAHO14841 1288 aa20.83■□□□□ 0.93
SNRPA1-201ENST00000254193 PGK1P00558 417 aa20.83■□□□□ 0.93
SNRPA1-201ENST00000254193 COL6A1P12109 1028 aa20.83■□□□□ 0.93
SNRPA1-201ENST00000254193 PSMA5P28066 241 aa20.83■□□□□ 0.93
SNRPA1-201ENST00000254193 ALDH5A1P51649 535 aaPredicted RBP20.83■□□□□ 0.93
SNRPA1-201ENST00000254193 CCDC144BQ3MJ40 725 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms