RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 TBCKQ8TEA7 893 aa16.62■□□□□ 0.25
UBE4B-201ENST00000253251 CLIC6Q96NY7 704 aa16.62■□□□□ 0.25
UBE4B-201ENST00000253251 NAPGQ99747 312 aaPredicted RBP16.62■□□□□ 0.25
UBE4B-201ENST00000253251 ZSWIM4Q9H7M6 989 aa16.62■□□□□ 0.25
UBE4B-201ENST00000253251 ATP6V0A2Q9Y487 856 aa16.62■□□□□ 0.25
UBE4B-201ENST00000253251 KIF1AQ12756 1690 aa16.62■□□□□ 0.25
UBE4B-201ENST00000253251 GDF11O95390 407 aa16.62■□□□□ 0.25
UBE4B-201ENST00000253251 EEF2P13639 858 aaKnown RBP16.62■□□□□ 0.25
UBE4B-201ENST00000253251 RFX5P48382 616 aaPredicted RBP16.62■□□□□ 0.25
UBE4B-201ENST00000253251 SFMBT2Q5VUG0 894 aa16.62■□□□□ 0.25
UBE4B-201ENST00000253251 LRCH2Q5VUJ6 765 aa16.62■□□□□ 0.25
UBE4B-201ENST00000253251 KCTD1Q719H9 257 aa16.62■□□□□ 0.25
UBE4B-201ENST00000253251 FAM178BQ8IXR5 827 aa16.62■□□□□ 0.25
UBE4B-201ENST00000253251 XPO4Q9C0E2 1151 aaKnown RBP16.62■□□□□ 0.25
UBE4B-201ENST00000253251 ARMCX3Q9UH62 379 aaPredicted RBP16.62■□□□□ 0.25
UBE4B-201ENST00000253251 ATF5Q9Y2D1 282 aaPredicted RBP16.62■□□□□ 0.25
UBE4B-201ENST00000253251 MEGF6O75095 1541 aa16.62■□□□□ 0.25
UBE4B-201ENST00000253251 ITPK1Q13572 414 aa16.61■□□□□ 0.25
UBE4B-201ENST00000253251 TDRD7Q8NHU6 1098 aaKnown RBP16.61■□□□□ 0.25
UBE4B-201ENST00000253251 M0QZ92 97 aa16.61■□□□□ 0.25
UBE4B-201ENST00000253251 KRT5P13647 590 aa16.61■□□□□ 0.25
UBE4B-201ENST00000253251 RIC8AQ9NPQ8 531 aa16.61■□□□□ 0.25
UBE4B-201ENST00000253251 XKR9Q5GH70 373 aa16.61■□□□□ 0.25
UBE4B-201ENST00000253251 SEL1L2Q5TEA6 688 aa16.61■□□□□ 0.25
UBE4B-201ENST00000253251 USP17L2Q6R6M4 530 aa16.61■□□□□ 0.25
UBE4B-201ENST00000253251 OR8K1Q8NGG5 319 aa16.61■□□□□ 0.25
UBE4B-201ENST00000253251 CCDC113Q9H0I3 377 aa16.61■□□□□ 0.25
UBE4B-201ENST00000253251 STMN4Q9H169 189 aaPredicted RBP16.61■□□□□ 0.25
UBE4B-201ENST00000253251 PPP2R5AQ15172 486 aa16.61■□□□□ 0.25
UBE4B-201ENST00000253251 SBK1Q52WX2 424 aa16.61■□□□□ 0.25
UBE4B-201ENST00000253251 JAKMIP2Q96AA8 810 aa16.61■□□□□ 0.25
UBE4B-201ENST00000253251 PCDHA5Q9Y5H7 936 aa16.61■□□□□ 0.25
UBE4B-201ENST00000253251 DTNBO60941 627 aa16.6■□□□□ 0.25
UBE4B-201ENST00000253251 FDX1P10109 184 aa16.6■□□□□ 0.25
UBE4B-201ENST00000253251 HARSP12081 509 aaKnown RBP16.6■□□□□ 0.25
UBE4B-201ENST00000253251 PFKFB3Q16875 520 aaPredicted RBP16.6■□□□□ 0.25
UBE4B-201ENST00000253251 NEDD4P46934 1319 aa16.6■□□□□ 0.25
UBE4B-201ENST00000253251 MAGEA1P43355 309 aa16.6■□□□□ 0.25
UBE4B-201ENST00000253251 CDC37Q16543 378 aaPredicted RBP16.6■□□□□ 0.25
UBE4B-201ENST00000253251 CEP128Q6ZU80 1094 aa16.6■□□□□ 0.25
UBE4B-201ENST00000253251 HERC5Q9UII4 1024 aaKnown RBP16.6■□□□□ 0.25
UBE4B-201ENST00000253251 OPA1O60313 960 aa16.6■□□□□ 0.25
UBE4B-201ENST00000253251 P4HA1P13674 534 aa16.6■□□□□ 0.25
UBE4B-201ENST00000253251 KLHL30Q0D2K2 578 aa16.6■□□□□ 0.25
UBE4B-201ENST00000253251 GRM4Q14833 912 aa16.6■□□□□ 0.25
UBE4B-201ENST00000253251 MAATS1Q7Z4T9 603 aa16.6■□□□□ 0.25
UBE4B-201ENST00000253251 TRMT44Q8IYL2 757 aaKnown RBP16.6■□□□□ 0.25
UBE4B-201ENST00000253251 ZNF579Q8NAF0 562 aaKnown RBP16.6■□□□□ 0.25
UBE4B-201ENST00000253251 NEDD1Q8NHV4 660 aa16.6■□□□□ 0.25
UBE4B-201ENST00000253251 SLC16A10Q8TF71 515 aa16.6■□□□□ 0.25
UBE4B-201ENST00000253251 TBC1D7Q9P0N9 293 aa16.6■□□□□ 0.25
UBE4B-201ENST00000253251 SYCE1Q8N0S2 351 aa16.6■□□□□ 0.25
UBE4B-201ENST00000253251 NACC1Q96RE7 527 aa16.6■□□□□ 0.25
UBE4B-201ENST00000253251 PPP1R9BQ96SB3 815 aa16.6■□□□□ 0.25
UBE4B-201ENST00000253251 TMEM47Q9BQJ4 181 aa16.6■□□□□ 0.25
UBE4B-201ENST00000253251 LY9Q9HBG7 655 aa16.6■□□□□ 0.25
UBE4B-201ENST00000253251 VAV2P52735 878 aa16.59■□□□□ 0.25
UBE4B-201ENST00000253251 NCAPG2Q86XI2 1143 aa16.59■□□□□ 0.25
UBE4B-201ENST00000253251 TBC1D16Q8TBP0 767 aa16.59■□□□□ 0.25
UBE4B-201ENST00000253251 ERO1AQ96HE7 468 aa16.59■□□□□ 0.25
UBE4B-201ENST00000253251 EEF1GP26641 437 aaKnown RBP16.59■□□□□ 0.25
UBE4B-201ENST00000253251 PSMD2Q13200 908 aa16.59■□□□□ 0.25
UBE4B-201ENST00000253251 SECISBP2LQ93073 1101 aaKnown RBP16.59■□□□□ 0.25
UBE4B-201ENST00000253251 NSUN4Q96CB9 384 aaKnown RBP16.59■□□□□ 0.25
UBE4B-201ENST00000253251 ZNF577Q9BSK1 485 aa16.59■□□□□ 0.25
UBE4B-201ENST00000253251 TRIM6Q9C030 488 aaPredicted RBP16.59■□□□□ 0.25
UBE4B-201ENST00000253251 IKBKGQ9Y6K9 419 aa16.59■□□□□ 0.25
UBE4B-201ENST00000253251 MAP2P11137 1827 aaKnown RBP16.59■□□□□ 0.25
UBE4B-201ENST00000253251 CDC25BP30305 580 aa16.59■□□□□ 0.25
UBE4B-201ENST00000253251 STRIP1Q5VSL9 837 aa16.59■□□□□ 0.25
UBE4B-201ENST00000253251 APOBEC3FQ8IUX4 373 aaKnown RBP16.59■□□□□ 0.25
UBE4B-201ENST00000253251 SPICE1Q8N0Z3 855 aa16.59■□□□□ 0.25
UBE4B-201ENST00000253251 CCDC26Q8TAB7 109 aa16.59■□□□□ 0.25
UBE4B-201ENST00000253251 GPR101Q96P66 508 aaPredicted RBP16.59■□□□□ 0.25
UBE4B-201ENST00000253251 MICALCLQ6ZW33 695 aa16.58■□□□□ 0.25
UBE4B-201ENST00000253251 SNAP23O00161 211 aa16.58■□□□□ 0.25
UBE4B-201ENST00000253251 KIF22Q14807 665 aa16.58■□□□□ 0.25
UBE4B-201ENST00000253251 ENAHQ8N8S7 591 aaPredicted RBP16.58■□□□□ 0.25
UBE4B-201ENST00000253251 ZNF341Q9BYN7 854 aa16.58■□□□□ 0.25
UBE4B-201ENST00000253251 MTRF1LQ9UGC7 380 aaKnown RBP16.58■□□□□ 0.25
UBE4B-201ENST00000253251 ZBTB5O15062 677 aa16.58■□□□□ 0.24
UBE4B-201ENST00000253251 LMAN1P49257 510 aa16.58■□□□□ 0.24
UBE4B-201ENST00000253251 NR5A1Q13285 461 aa16.58■□□□□ 0.24
UBE4B-201ENST00000253251 DMP1Q13316 513 aaPredicted RBP16.58■□□□□ 0.24
UBE4B-201ENST00000253251 SLC10A5Q5PT55 438 aa16.58■□□□□ 0.24
UBE4B-201ENST00000253251 STYK1Q6J9G0 422 aa16.58■□□□□ 0.24
UBE4B-201ENST00000253251 MAEAQ7L5Y9 396 aa16.58■□□□□ 0.24
UBE4B-201ENST00000253251 UBL4BQ8N7F7 174 aa16.58■□□□□ 0.24
UBE4B-201ENST00000253251 KIAA1024Q9UPX6 916 aa16.58■□□□□ 0.24
UBE4B-201ENST00000253251 AOC3Q16853 763 aa16.58■□□□□ 0.24
UBE4B-201ENST00000253251 FAM102BQ5T8I3 360 aa16.58■□□□□ 0.24
UBE4B-201ENST00000253251 RCSD1Q6JBY9 416 aa16.58■□□□□ 0.24
UBE4B-201ENST00000253251 GBP6Q6ZN66 633 aa16.58■□□□□ 0.24
UBE4B-201ENST00000253251 CYB5R4Q7L1T6 521 aa16.58■□□□□ 0.24
UBE4B-201ENST00000253251 FAM107BQ9H098 131 aa16.58■□□□□ 0.24
UBE4B-201ENST00000253251 ZNF609O15014 1411 aa16.58■□□□□ 0.24
UBE4B-201ENST00000253251 TMOD1P28289 359 aa16.57■□□□□ 0.24
UBE4B-201ENST00000253251 CCND2P30279 289 aa16.57■□□□□ 0.24
UBE4B-201ENST00000253251 RAD51AP2Q09MP3 1159 aa16.57■□□□□ 0.24
UBE4B-201ENST00000253251 SEMA3FQ13275 785 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms