RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 PLA2G6O60733 806 aa12.26□□□□□ -0.45
VPS50-201ENST00000251739 ZBED4O75132 1171 aa12.26□□□□□ -0.45
VPS50-201ENST00000251739 DUSP11O75319 330 aaKnown RBP12.26□□□□□ -0.45
VPS50-201ENST00000251739 APPP05067 770 aa12.26□□□□□ -0.45
VPS50-201ENST00000251739 FDX1P10109 184 aa12.26□□□□□ -0.45
VPS50-201ENST00000251739 BMP3P12645 472 aa12.26□□□□□ -0.45
VPS50-201ENST00000251739 ACLYP53396 1101 aa12.26□□□□□ -0.45
VPS50-201ENST00000251739 EPHB4P54760 987 aa12.26□□□□□ -0.45
VPS50-201ENST00000251739 NKX3-2P78367 333 aa12.26□□□□□ -0.45
VPS50-201ENST00000251739 PDE4BQ07343 736 aa12.26□□□□□ -0.45
VPS50-201ENST00000251739 SLFN13Q68D06 897 aa12.26□□□□□ -0.45
VPS50-201ENST00000251739 ZNF444Q8N0Y2 327 aaPredicted RBP12.26□□□□□ -0.45
VPS50-201ENST00000251739 CPXCR1Q8N123 301 aa12.26□□□□□ -0.45
VPS50-201ENST00000251739 FAM133AQ8N9E0 248 aa12.26□□□□□ -0.45
VPS50-201ENST00000251739 KIFC2Q96AC6 838 aa12.26□□□□□ -0.45
VPS50-201ENST00000251739 DDX11Q96FC9 970 aa12.26□□□□□ -0.45
VPS50-201ENST00000251739 FSD1Q9BTV5 496 aa12.26□□□□□ -0.45
VPS50-201ENST00000251739 NAPBQ9H115 298 aa12.26□□□□□ -0.45
VPS50-201ENST00000251739 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.26□□□□□ -0.45
VPS50-201ENST00000251739 TBX21Q9UL17 535 aa12.26□□□□□ -0.45
VPS50-201ENST00000251739 FAM184BQ9ULE4 1060 aa12.26□□□□□ -0.45
VPS50-201ENST00000251739 TACC3Q9Y6A5 838 aa12.26□□□□□ -0.45
VPS50-201ENST00000251739 NCOR1O75376 2440 aa12.26□□□□□ -0.45
VPS50-201ENST00000251739 MOXD2PA6NHM9 499 aa12.25□□□□□ -0.45
VPS50-201ENST00000251739 DLL1O00548 723 aa12.25□□□□□ -0.45
VPS50-201ENST00000251739 DPYSL4O14531 572 aa12.25□□□□□ -0.45
VPS50-201ENST00000251739 CTAGE5O15320 804 aa12.25□□□□□ -0.45
VPS50-201ENST00000251739 FGRP09769 529 aa12.25□□□□□ -0.45
VPS50-201ENST00000251739 TSPY3P0CV98 308 aa12.25□□□□□ -0.45
VPS50-201ENST00000251739 TSPY8P0CW00 308 aa12.25□□□□□ -0.45
VPS50-201ENST00000251739 SMAD3P84022 425 aaKnown RBP12.25□□□□□ -0.45
VPS50-201ENST00000251739 TFAP4Q01664 338 aa12.25□□□□□ -0.45
VPS50-201ENST00000251739 FAAP100Q0VG06 881 aa12.25□□□□□ -0.45
VPS50-201ENST00000251739 ACVR2BQ13705 512 aa12.25□□□□□ -0.45
VPS50-201ENST00000251739 ARMCX2Q7L311 632 aa12.25□□□□□ -0.45
VPS50-201ENST00000251739 ABHD16BQ9H3Z7 469 aa12.25□□□□□ -0.45
VPS50-201ENST00000251739 IL17RBQ9NRM6 502 aa12.25□□□□□ -0.45
VPS50-201ENST00000251739 ANAPC4Q9UJX5 808 aa12.25□□□□□ -0.45
VPS50-201ENST00000251739 ZHX1Q9UKY1 873 aaPredicted RBP12.25□□□□□ -0.45
VPS50-201ENST00000251739 ASTN1O14525 1302 aa12.25□□□□□ -0.45
VPS50-201ENST00000251739 CHD7Q9P2D1 2997 aa12.24□□□□□ -0.45
VPS50-201ENST00000251739 TMEM232C9JQI7 657 aa12.24□□□□□ -0.45
VPS50-201ENST00000251739 PQBP1O60828 265 aaKnown RBP12.24□□□□□ -0.45
VPS50-201ENST00000251739 ELP1O95163 1332 aa12.24□□□□□ -0.45
VPS50-201ENST00000251739 HOXB1P14653 301 aaPredicted RBP12.24□□□□□ -0.45
VPS50-201ENST00000251739 CDK7P50613 346 aa12.24□□□□□ -0.45
VPS50-201ENST00000251739 STAT2P52630 851 aa12.24□□□□□ -0.45
VPS50-201ENST00000251739 RRP1P56182 461 aaKnown RBP12.24□□□□□ -0.45
VPS50-201ENST00000251739 GJA9P57773 515 aa12.24□□□□□ -0.45
VPS50-201ENST00000251739 CNTN2Q02246 1040 aa12.24□□□□□ -0.45
VPS50-201ENST00000251739 KCNA10Q16322 511 aa12.24□□□□□ -0.45
VPS50-201ENST00000251739 CCDC144BQ3MJ40 725 aa12.24□□□□□ -0.45
VPS50-201ENST00000251739 CCDC129Q6ZRS4 1044 aa12.24□□□□□ -0.45
VPS50-201ENST00000251739 RASGRP2Q7LDG7 609 aa12.24□□□□□ -0.45
VPS50-201ENST00000251739 FAM160B2Q86V87 743 aa12.24□□□□□ -0.45
VPS50-201ENST00000251739 ANKRD35Q8N283 1001 aa12.24□□□□□ -0.45
VPS50-201ENST00000251739 GBF1Q92538 1859 aa12.24□□□□□ -0.45
VPS50-201ENST00000251739 TTYH1Q9H313 450 aaPredicted RBP12.24□□□□□ -0.45
VPS50-201ENST00000251739 ACAD9Q9H845 621 aa12.24□□□□□ -0.45
VPS50-201ENST00000251739 A1CFQ9NQ94 594 aaKnown RBP12.24□□□□□ -0.45
VPS50-201ENST00000251739 STARD7Q9NQZ5 370 aa12.24□□□□□ -0.45
VPS50-201ENST00000251739 ZMYM6O95789 1325 aa12.23□□□□□ -0.45
VPS50-201ENST00000251739 ORC4O43929 436 aa12.23□□□□□ -0.45
VPS50-201ENST00000251739 ST18O60284 1047 aa12.23□□□□□ -0.45
VPS50-201ENST00000251739 SLC3A2P08195 630 aaKnown RBP12.23□□□□□ -0.45
VPS50-201ENST00000251739 ALX1Q15699 326 aa12.23□□□□□ -0.45
VPS50-201ENST00000251739 ARSIQ5FYB1 569 aa12.23□□□□□ -0.45
VPS50-201ENST00000251739 PPP4R3BQ5MIZ7 849 aa12.23□□□□□ -0.45
VPS50-201ENST00000251739 ZNF697Q5TEC3 545 aa12.23□□□□□ -0.45
VPS50-201ENST00000251739 VPS53Q5VIR6 699 aa12.23□□□□□ -0.45
VPS50-201ENST00000251739 CCDC144CPQ8IYA2 1237 aa12.23□□□□□ -0.45
VPS50-201ENST00000251739 CHURC1Q8WUH1 139 aa12.23□□□□□ -0.45
VPS50-201ENST00000251739 NUP133Q8WUM0 1156 aa12.23□□□□□ -0.45
VPS50-201ENST00000251739 STAG1Q8WVM7 1258 aa12.23□□□□□ -0.45
VPS50-201ENST00000251739 AGBL1Q96MI9 1066 aa12.23□□□□□ -0.45
VPS50-201ENST00000251739 RNF146Q9NTX7 359 aa12.23□□□□□ -0.45
VPS50-201ENST00000251739 TRANK1O15050 2925 aa12.23□□□□□ -0.45
VPS50-201ENST00000251739 SCN10AQ9Y5Y9 1956 aa12.22□□□□□ -0.45
VPS50-201ENST00000251739 TMEM265A0A087WTH1 108 aa12.22□□□□□ -0.45
VPS50-201ENST00000251739 SOWAHBA6NEL2 793 aa12.22□□□□□ -0.45
VPS50-201ENST00000251739 NMT2O60551 498 aa12.22□□□□□ -0.45
VPS50-201ENST00000251739 ASGR1P07306 291 aa12.22□□□□□ -0.45
VPS50-201ENST00000251739 RAG1P15918 1043 aa12.22□□□□□ -0.45
VPS50-201ENST00000251739 MCCP23508 829 aa12.22□□□□□ -0.45
VPS50-201ENST00000251739 SLC1A4P43007 532 aa12.22□□□□□ -0.45
VPS50-201ENST00000251739 FPGSQ05932 587 aa12.22□□□□□ -0.45
VPS50-201ENST00000251739 CTDSPL2Q05D32 466 aa12.22□□□□□ -0.45
VPS50-201ENST00000251739 HDAC1Q13547 482 aaPredicted RBP12.22□□□□□ -0.45
VPS50-201ENST00000251739 TKFCQ3LXA3 575 aa12.22□□□□□ -0.45
VPS50-201ENST00000251739 RCSD1Q6JBY9 416 aa12.22□□□□□ -0.45
VPS50-201ENST00000251739 TICAM2Q86XR7 235 aa12.22□□□□□ -0.45
VPS50-201ENST00000251739 PCSK9Q8NBP7 692 aaKnown RBP12.22□□□□□ -0.45
VPS50-201ENST00000251739 FAM161BQ96MY7 647 aa12.22□□□□□ -0.45
VPS50-201ENST00000251739 CDX2Q99626 313 aaPredicted RBP12.22□□□□□ -0.45
VPS50-201ENST00000251739 SEMA6BQ9H3T3 888 aa12.22□□□□□ -0.45
VPS50-201ENST00000251739 INCENPQ9NQS7 918 aa12.22□□□□□ -0.45
VPS50-201ENST00000251739 HOMER2Q9NSB8 354 aa12.22□□□□□ -0.45
VPS50-201ENST00000251739 PRR12Q9ULL5 1215 aa12.22□□□□□ -0.45
VPS50-201ENST00000251739 STX8Q9UNK0 236 aa12.22□□□□□ -0.45
VPS50-201ENST00000251739 CTDP1Q9Y5B0 961 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms